File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 352ms, 87.13% of 404ms total Dropped 188 nodes (cum <= 2.02ms) flat flat% sum% cum cum% 0 0% 0% 394ms 97.52% __libc_start_call_main 0 0% 0% 394ms 97.52% __libc_start_main_impl 0 0% 0% 394ms 97.52% _start 0 0% 0% 392ms 97.03% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 392ms 97.03% CxxTest::TestRunner::runAllTests 0 0% 0% 392ms 97.03% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 392ms 97.03% main 0 0% 0% 362ms 89.60% CxxTest::RealTestDescription::run 0 0% 0% 362ms 89.60% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 362ms 89.60% CxxTest::TestRunner::runTest (inline) 0 0% 0% 362ms 89.60% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 362ms 89.60% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 359ms 88.86% AbstractCardiacProblem::Solve 0 0% 0% 356ms 88.12% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 325ms 80.45% LinearSystem::Solve 0 0% 0% 323ms 79.95% KSPSolve 0 0% 0% 323ms 79.95% KSPSolve_CG 0 0% 0% 323ms 79.95% KSPSolve_Private 0 0% 0% 126ms 31.19% KSP_PCApply.lto_priv.7 0 0% 0% 124ms 30.69% PCApply 0 0% 0% 124ms 30.69% PCApply_BJacobi_Singleblock 0 0% 0% 114ms 28.22% MatMult 9ms 2.23% 2.23% 114ms 28.22% MatMult_SeqAIJ (partial-inline) 102ms 25.25% 27.48% 108ms 26.73% MatMult_SeqAIJ_Inode (inline) 0 0% 27.48% 98ms 24.26% KSPSolve_PREONLY (partial-inline) 0 0% 27.48% 93ms 23.02% MatSolve 92ms 22.77% 50.25% 93ms 23.02% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 50.25% 93ms 23.02% PCApply_ICC 54ms 13.37% 63.61% 54ms 13.37% ddot_ 0 0% 63.61% 40ms 9.90% VecTDot 0 0% 63.61% 40ms 9.90% VecTDot_Seq 0 0% 63.61% 40ms 9.90% VecXDot_Seq_Private.constprop.0 0 0% 63.61% 28ms 6.93% CxxTest::RealWorldDescription::setUp 0 0% 63.61% 28ms 6.93% PetscInitialize 0 0% 63.61% 28ms 6.93% PetscSetup::setUpWorld 0 0% 63.61% 28ms 6.93% PetscSetupUtils::CommonSetup 0 0% 63.61% 28ms 6.93% PetscSetupUtils::InitialisePetsc 0 0% 63.61% 27ms 6.68% AbstractCardiacTissue::SolveCellSystems 0 0% 63.61% 27ms 6.68% PMPI_Init_thread 0 0% 63.61% 27ms 6.68% ompi_mpi_init 1ms 0.25% 63.86% 22ms 5.45% 0 0% 63.86% 17ms 4.21% orte_init 0 0% 63.86% 16ms 3.96% AbstractCardiacCell::ComputeExceptVoltage 2ms 0.5% 64.36% 15ms 3.71% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 64.36% 15ms 3.71% VecNorm 0 0% 64.36% 15ms 3.71% VecNorm_Seq 0 0% 64.36% 14ms 3.47% MatNullSpaceRemove 0 0% 64.36% 14ms 3.47% VecAYPX 14ms 3.47% 67.82% 14ms 3.47% VecAYPX_Seq 0 0% 67.82% 13ms 3.22% mca_base_framework_open 0 0% 67.82% 12ms 2.97% EulerIvpOdeSolver::CalculateNextYValue 0 0% 67.82% 12ms 2.97% VecAXPY 0 0% 67.82% 12ms 2.97% VecAXPY_Seq 0 0% 67.82% 12ms 2.97% VecDuplicate 12ms 2.97% 70.79% 12ms 2.97% daxpy_ 0 0% 70.79% 12ms 2.97% mca_base_framework_register 3ms 0.74% 71.53% 11ms 2.72% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 71.53% 11ms 2.72% VecDuplicate_Seq 0 0% 71.53% 11ms 2.72% mca_base_framework_components_register 0 0% 71.53% 10ms 2.48% _dl_init 0 0% 71.53% 10ms 2.48% call_init (inline) 0 0% 71.53% 9ms 2.23% AbstractCardiacTissue::UpdateCaches (inline) 4ms 0.99% 72.52% 9ms 2.23% CellLuoRudy1991FromCellML::GetIIonic 0 0% 72.52% 9ms 2.23% __GI__dl_catch_exception 0 0% 72.52% 9ms 2.23% ___dlopen 0 0% 72.52% 9ms 2.23% _dl_catch_error 0 0% 72.52% 9ms 2.23% _dl_open 0 0% 72.52% 9ms 2.23% _dl_start_user 0 0% 72.52% 9ms 2.23% _dlerror_run 0 0% 72.52% 9ms 2.23% dlopen_doit 0 0% 72.52% 9ms 2.23% dlopen_implementation (inline) 0 0% 72.52% 8ms 1.98% VecMAXPY 7ms 1.73% 74.26% 8ms 1.98% VecMAXPY_Seq 3ms 0.74% 75.00% 8ms 1.98% __GI___exp 0 0% 75.00% 8ms 1.98% hwloc_topology_load 0 0% 75.00% 8ms 1.98% mca_base_component_find 0 0% 75.00% 8ms 1.98% mca_base_component_repository_open 0 0% 75.00% 8ms 1.98% opal_stackframe_output 0 0% 75.00% 7ms 1.73% KSP_PCApply (partial-inline) 1ms 0.25% 75.25% 7ms 1.73% VecSetType 4ms 0.99% 76.24% 7ms 1.73% _dl_fixup 0 0% 76.24% 7ms 1.73% _dl_lookup_symbol_x 0 0% 76.24% 7ms 1.73% _dl_runtime_resolve_xsavec 0 0% 76.24% 7ms 1.73% dl_open_worker 0 0% 76.24% 7ms 1.73% hwloc_linux_get_tid_last_cpu_location 1ms 0.25% 76.49% 6ms 1.49% PetscMallocA 0 0% 76.49% 6ms 1.49% VecMDot 6ms 1.49% 77.97% 6ms 1.49% VecMDot_Seq 0 0% 77.97% 6ms 1.49% VecMXDot_Private 0 0% 77.97% 6ms 1.49% dl_open_worker_begin 0 0% 77.97% 5ms 1.24% PetscMallocAlign 5ms 1.24% 79.21% 5ms 1.24% [libchaste_heart.so] 5ms 1.24% 80.45% 5ms 1.24% __memcpy_evex_unaligned_erms 1ms 0.25% 80.69% 5ms 1.24% __posix_memalign 0 0% 80.69% 4ms 0.99% BidomainSolver::SetupLinearSystem 0 0% 80.69% 4ms 0.99% PetscMemcpy (inline) 0 0% 80.69% 4ms 0.99% PetscMemzero (inline) 0 0% 80.69% 4ms 0.99% VecCreate_Seq 0 0% 80.69% 4ms 0.99% VecCreate_Seq_Private 3ms 0.74% 81.44% 4ms 0.99% __GI___libc_malloc 4ms 0.99% 82.43% 4ms 0.99% __ieee754_exp_fma 4ms 0.99% 83.42% 4ms 0.99% __memset_evex_unaligned_erms 0 0% 83.42% 4ms 0.99% _dl_open_relocate_one_object (inline) 0 0% 83.42% 4ms 0.99% _dl_relocate_object 0 0% 83.42% 4ms 0.99% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 83.42% 4ms 0.99% boost::serialization::singleton::get_instance 0 0% 83.42% 4ms 0.99% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 83.42% 4ms 0.99% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 4ms 0.99% 84.41% 4ms 0.99% do_lookup_x 0 0% 84.41% 4ms 0.99% elf_dynamic_do_Rela (inline) 0 0% 84.41% 4ms 0.99% elf_machine_rela (inline) 0 0% 84.41% 4ms 0.99% mca_base_var_group_register 0 0% 84.41% 4ms 0.99% mca_base_var_register 0 0% 84.41% 4ms 0.99% orte_ess_base_proc_binding 0 0% 84.41% 4ms 0.99% resolve_map (inline) 0 0% 84.41% 3ms 0.74% AbstractCardiacProblem::Initialise 0 0% 84.41% 3ms 0.74% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.41% 3ms 0.74% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.41% 3ms 0.74% KSPConvergedDefault 0 0% 84.41% 3ms 0.74% VecCopy 0 0% 84.41% 3ms 0.74% VecCopy_Seq (partial-inline) 0 0% 84.41% 3ms 0.74% VecCreate 0 0% 84.41% 3ms 0.74% VecSet 0 0% 84.41% 3ms 0.74% VecSet_Seq (partial-inline) 1ms 0.25% 84.65% 3ms 0.74% __GI___libc_free 3ms 0.74% 85.40% 3ms 0.74% __GI___libc_read 3ms 0.74% 86.14% 3ms 0.74% _dl_new_hash (inline) 3ms 0.74% 86.88% 3ms 0.74% _mm_prefetch (inline) 0 0% 86.88% 3ms 0.74% mca_base_component_var_register 0 0% 86.88% 3ms 0.74% mca_base_framework_components_open 1ms 0.25% 87.13% 3ms 0.74% mca_base_var_generate_full_name4 0 0% 87.13% 3ms 0.74% mca_topo_base_dist_graph_neighbors_count 0 0% 87.13% 3ms 0.74% opal_hwloc_base_get_topology