File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 433ms, 88.01% of 492ms total Dropped 243 nodes (cum <= 2.46ms) flat flat% sum% cum cum% 0 0% 0% 482ms 97.97% __libc_start_call_main 0 0% 0% 482ms 97.97% __libc_start_main_impl 0 0% 0% 482ms 97.97% _start 0 0% 0% 478ms 97.15% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 478ms 97.15% CxxTest::TestRunner::runAllTests 0 0% 0% 478ms 97.15% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 478ms 97.15% main 0 0% 0% 432ms 87.80% CxxTest::RealTestDescription::run 0 0% 0% 432ms 87.80% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 432ms 87.80% CxxTest::TestRunner::runTest (inline) 0 0% 0% 432ms 87.80% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 432ms 87.80% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 428ms 86.99% AbstractCardiacProblem::Solve 0 0% 0% 426ms 86.59% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 389ms 79.07% KSPSolve 0 0% 0% 389ms 79.07% KSPSolve_Private 0 0% 0% 389ms 79.07% LinearSystem::Solve 0 0% 0% 388ms 78.86% KSPSolve_CG 0 0% 0% 227ms 46.14% KSP_PCApply.lto_priv.7 0 0% 0% 219ms 44.51% PCApply 2ms 0.41% 0.41% 219ms 44.51% PCApply_BJacobi_Singleblock 0 0% 0.41% 185ms 37.60% KSPSolve_PREONLY (partial-inline) 0 0% 0.41% 173ms 35.16% MatSolve 168ms 34.15% 34.55% 173ms 35.16% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 34.55% 173ms 35.16% PCApply_ICC 0 0% 34.55% 81ms 16.46% MatMult 0 0% 34.55% 81ms 16.46% MatMult_SeqAIJ 81ms 16.46% 51.02% 81ms 16.46% MatMult_SeqAIJ_Inode (inline) 53ms 10.77% 61.79% 53ms 10.77% ddot_ 0 0% 61.79% 42ms 8.54% CxxTest::RealWorldDescription::setUp 0 0% 61.79% 42ms 8.54% PetscInitialize 0 0% 61.79% 42ms 8.54% PetscSetup::setUpWorld 0 0% 61.79% 42ms 8.54% PetscSetupUtils::CommonSetup 0 0% 61.79% 42ms 8.54% PetscSetupUtils::InitialisePetsc 0 0% 61.79% 41ms 8.33% PMPI_Init_thread 2ms 0.41% 62.20% 41ms 8.33% ompi_mpi_init 0 0% 62.20% 39ms 7.93% VecTDot 0 0% 62.20% 39ms 7.93% VecTDot_Seq 0 0% 62.20% 39ms 7.93% VecXDot_Seq_Private.constprop.0 2ms 0.41% 62.60% 31ms 6.30% 1ms 0.2% 62.80% 28ms 5.69% MatNullSpaceRemove 0 0% 62.80% 27ms 5.49% AbstractCardiacTissue::SolveCellSystems 0 0% 62.80% 22ms 4.47% __GI__dl_catch_exception 0 0% 62.80% 22ms 4.47% _dl_catch_error 0 0% 62.80% 22ms 4.47% _dlerror_run 0 0% 62.80% 22ms 4.47% orte_init 0 0% 62.80% 20ms 4.07% ___dlopen 0 0% 62.80% 20ms 4.07% _dl_open 0 0% 62.80% 20ms 4.07% dl_open_worker 0 0% 62.80% 20ms 4.07% dlopen_doit 0 0% 62.80% 20ms 4.07% dlopen_implementation (inline) 0 0% 62.80% 20ms 4.07% mca_base_framework_open 0 0% 62.80% 20ms 4.07% mca_base_framework_register 0 0% 62.80% 19ms 3.86% mca_base_framework_components_register 0 0% 62.80% 19ms 3.86% opal_stackframe_output 0 0% 62.80% 17ms 3.46% mca_base_component_find 0 0% 62.80% 17ms 3.46% mca_base_component_repository_open 0 0% 62.80% 16ms 3.25% VecMDot 16ms 3.25% 66.06% 16ms 3.25% VecMDot_Seq 0 0% 66.06% 16ms 3.25% VecMXDot_Private 0 0% 66.06% 15ms 3.05% KSP_PCApply (partial-inline) 0 0% 66.06% 15ms 3.05% VecNorm 0 0% 66.06% 15ms 3.05% VecNorm_Seq 0 0% 66.06% 15ms 3.05% _dl_init 0 0% 66.06% 15ms 3.05% call_init (inline) 1ms 0.2% 66.26% 14ms 2.85% AbstractCardiacCell::ComputeExceptVoltage 0 0% 66.26% 14ms 2.85% hwloc_topology_load 0 0% 66.26% 13ms 2.64% AbstractOneStepIvpOdeSolver::InternalSolve 13ms 2.64% 68.90% 13ms 2.64% __memcpy_avx_unaligned_erms 0 0% 68.90% 13ms 2.64% dl_open_worker_begin 0 0% 68.90% 12ms 2.44% VecAYPX 11ms 2.24% 71.14% 12ms 2.44% VecAYPX_Seq 0 0% 71.14% 12ms 2.44% VecDuplicate 1ms 0.2% 71.34% 12ms 2.44% VecDuplicate_Seq 0 0% 71.34% 12ms 2.44% hwloc_linux_get_tid_last_cpu_location 2ms 0.41% 71.75% 11ms 2.24% EulerIvpOdeSolver::CalculateNextYValue 0 0% 71.75% 11ms 2.24% PetscMemcpy (inline) 0 0% 71.75% 11ms 2.24% VecMAXPY 10ms 2.03% 73.78% 11ms 2.24% VecMAXPY_Seq 0 0% 73.78% 10ms 2.03% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.61% 74.39% 10ms 2.03% CellLuoRudy1991FromCellML::GetIIonic 5ms 1.02% 75.41% 10ms 2.03% __GI___exp 3ms 0.61% 76.02% 9ms 1.83% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 76.02% 9ms 1.83% VecAXPY 1ms 0.2% 76.22% 9ms 1.83% VecAXPY_Seq 0 0% 76.22% 9ms 1.83% mca_base_framework_components_open 0 0% 76.22% 9ms 1.83% mca_topo_base_dist_graph_neighbors_count 0 0% 76.22% 8ms 1.63% _dl_lookup_symbol_x 0 0% 76.22% 8ms 1.63% _dl_map_object 0 0% 76.22% 8ms 1.63% _dl_start_user 8ms 1.63% 77.85% 8ms 1.63% daxpy_ 1ms 0.2% 78.05% 7ms 1.42% BidomainSolver::SetupLinearSystem 1ms 0.2% 78.25% 7ms 1.42% PetscMallocA 1ms 0.2% 78.46% 7ms 1.42% boost::serialization::singleton::get_instance 0 0% 78.46% 6ms 1.22% PetscMallocAlign (partial-inline) 1ms 0.2% 78.66% 6ms 1.22% VecCreate 1ms 0.2% 78.86% 6ms 1.22% VecDestroy 6ms 1.22% 80.08% 6ms 1.22% __GI___clock_nanosleep 0 0% 80.08% 6ms 1.22% __GI___nanosleep 6ms 1.22% 81.30% 6ms 1.22% __strcmp_avx2 0 0% 81.30% 6ms 1.22% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 5ms 1.02% 82.32% 6ms 1.22% do_lookup_x 0 0% 82.32% 6ms 1.22% usleep 0 0% 82.32% 5ms 1.02% KSPConvergedDefault 0 0% 82.32% 5ms 1.02% VecCopy 0 0% 82.32% 5ms 1.02% VecCopy_Seq (partial-inline) 0 0% 82.32% 5ms 1.02% VecSetType 3ms 0.61% 82.93% 5ms 1.02% __ieee754_exp_fma 0 0% 82.93% 5ms 1.02% _dl_open_relocate_one_object (inline) 0 0% 82.93% 5ms 1.02% _dl_relocate_object 0 0% 82.93% 5ms 1.02% elf_dynamic_do_Rela (inline) 0 0% 82.93% 5ms 1.02% elf_machine_rela (inline) 0 0% 82.93% 5ms 1.02% opal_hwloc_base_get_topology 0 0% 82.93% 5ms 1.02% orte_ess_base_proc_binding 0 0% 82.93% 5ms 1.02% resolve_map (inline) 0 0% 82.93% 4ms 0.81% AbstractCardiacProblem::Initialise 0 0% 82.93% 4ms 0.81% CxxTest::RealWorldDescription::tearDown 0 0% 82.93% 4ms 0.81% PetscFinalize 0 0% 82.93% 4ms 0.81% PetscMemzero (inline) 0 0% 82.93% 4ms 0.81% PetscSetup::tearDownWorld 0 0% 82.93% 4ms 0.81% PetscSetupUtils::CommonFinalize 0 0% 82.93% 4ms 0.81% __GI_exit 1ms 0.2% 83.13% 4ms 0.81% __cxa_finalize 4ms 0.81% 83.94% 4ms 0.81% __memset_avx2_unaligned_erms 0 0% 83.94% 4ms 0.81% __run_exit_handlers 0 0% 83.94% 4ms 0.81% _dl_call_fini 0 0% 83.94% 4ms 0.81% _dl_fini 0 0% 83.94% 4ms 0.81% _dl_map_object_from_fd 3ms 0.61% 84.55% 4ms 0.81% _int_malloc 0 0% 84.55% 4ms 0.81% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 84.55% 4ms 0.81% mca_base_var_group_register 0 0% 84.55% 4ms 0.81% mca_base_var_register 1ms 0.2% 84.76% 3ms 0.61% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.76% 3ms 0.61% PetscFreeAlign 0 0% 84.76% 3ms 0.61% VecCreate_Seq 0 0% 84.76% 3ms 0.61% XOpenDisplay 0 0% 84.76% 3ms 0.61% [hwloc_gl.so] 0 0% 84.76% 3ms 0.61% [libxcb.so.1.1.0] 0 0% 84.76% 3ms 0.61% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 84.76% 3ms 0.61% _XConnectXCB 0 0% 84.76% 3ms 0.61% __GI___libc_free 1ms 0.2% 84.96% 3ms 0.61% __GI___libc_malloc 3ms 0.61% 85.57% 3ms 0.61% __GI___libc_read 0 0% 85.57% 3ms 0.61% __GI_getaddrinfo 0 0% 85.57% 3ms 0.61% __ieee754_pow_fma 3ms 0.61% 86.18% 3ms 0.61% __libc_openat64 3ms 0.61% 86.79% 3ms 0.61% __mmap64 1ms 0.2% 86.99% 3ms 0.61% __posix_memalign 0 0% 86.99% 3ms 0.61% __pow 0 0% 86.99% 3ms 0.61% _dl_fixup 0 0% 86.99% 3ms 0.61% _dl_map_object_deps 0 0% 86.99% 3ms 0.61% _dl_map_segments (inline) 0 0% 86.99% 3ms 0.61% _dl_runtime_resolve_xsavec 2ms 0.41% 87.40% 3ms 0.61% _int_free 0 0% 87.40% 3ms 0.61% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.40% 3ms 0.61% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 87.40% 3ms 0.61% ompi_mpi_finalize 0 0% 87.40% 3ms 0.61% openaux 0 0% 87.40% 3ms 0.61% std::pow (inline) 3ms 0.61% 88.01% 3ms 0.61% strcmp 0 0% 88.01% 3ms 0.61% xcb_connect_to_display_with_auth_info