File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 120956ms, 91.66% of 131966ms total Dropped 1156 nodes (cum <= 659.83ms) flat flat% sum% cum cum% 0 0% 0% 131956ms 100% __libc_start_call_main 0 0% 0% 131956ms 100% __libc_start_main_impl 0 0% 0% 131956ms 100% _start 0 0% 0% 131952ms 100% main 0 0% 0% 131951ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 131951ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 131951ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 131912ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 131911ms 100% AbstractConvergenceTester::Converge 0 0% 0% 131911ms 100% CxxTest::RealTestDescription::run 0 0% 0% 131911ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 131911ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 131911ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 2ms 0.0015% 0.0015% 130699ms 99.04% AbstractCardiacProblem::Solve 12ms 0.0091% 0.011% 129847ms 98.39% AbstractDynamicLinearPdeSolver::Solve 4ms 0.003% 0.014% 72450ms 54.90% LinearSystem::Solve 0 0% 0.014% 71856ms 54.45% KSPSolve 11ms 0.0083% 0.022% 71856ms 54.45% KSPSolve_Private 10ms 0.0076% 0.03% 71461ms 54.15% KSPSolve_SYMMLQ 463ms 0.35% 0.38% 47740ms 36.18% AbstractCardiacTissue::SolveCellSystems 5ms 0.0038% 0.38% 40644ms 30.80% PCApply 2ms 0.0015% 0.39% 40628ms 30.79% PCApply_BJacobi_Singleblock 0 0% 0.39% 38116ms 28.88% KSPSolve_PREONLY (partial-inline) 1034ms 0.78% 1.17% 37267ms 28.24% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.003% 1.17% 37096ms 28.11% PCApply_ICC 7ms 0.0053% 1.18% 37092ms 28.11% MatSolve 36692ms 27.80% 28.98% 37085ms 28.10% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.00076% 28.98% 34744ms 26.33% KSP_PCApply.lto_priv.18 7822ms 5.93% 34.91% 32940ms 24.96% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 7ms 0.0053% 34.92% 25405ms 19.25% MatMult 322ms 0.24% 35.16% 25398ms 19.25% MatMult_SeqAIJ (partial-inline) 24874ms 18.85% 54.01% 25392ms 19.24% MatMult_SeqAIJ_Inode (inline) 2306ms 1.75% 55.76% 16846ms 12.77% CardiacNewtonSolver::Solve 5633ms 4.27% 60.02% 10033ms 7.60% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1539ms 1.17% 61.19% 9777ms 7.41% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 190ms 0.14% 61.33% 9047ms 6.86% AbstractCardiacTissue::UpdateCaches (inline) 1805ms 1.37% 62.70% 8483ms 6.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1163ms 0.88% 63.58% 8475ms 6.42% BidomainSolver::SetupLinearSystem 7941ms 6.02% 69.60% 7941ms 6.02% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 2ms 0.0015% 69.60% 7656ms 5.80% KSP_PCApply (partial-inline) 8ms 0.0061% 69.61% 7173ms 5.44% KSPConvergedDefault 4117ms 3.12% 72.73% 4225ms 3.20% __ieee754_log_fma 0 0% 72.73% 4039ms 3.06% boost::numeric::ublas::norm_inf (inline) 2740ms 2.08% 74.80% 4039ms 3.06% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.80% 4039ms 3.06% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.80% 4039ms 3.06% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3ms 0.0023% 74.81% 3241ms 2.46% MatNullSpaceRemove 3226ms 2.44% 77.25% 3226ms 2.44% ddot_ 28ms 0.021% 77.27% 3168ms 2.40% std::pow (inline) 418ms 0.32% 77.59% 3124ms 2.37% __pow 2050ms 1.55% 79.14% 3096ms 2.35% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 3065ms 2.32% 81.46% 3065ms 2.32% __memcpy_avx_unaligned_erms 0 0% 81.46% 3034ms 2.30% PetscMemcpy (inline) 7ms 0.0053% 81.47% 2698ms 2.04% VecDot 3ms 0.0023% 81.47% 2691ms 2.04% VecDot_Seq 1ms 0.00076% 81.47% 2688ms 2.04% VecXDot_Seq_Private.constprop.0 25ms 0.019% 81.49% 2675ms 2.03% VecCopy 346ms 0.26% 81.75% 2673ms 2.03% __ieee754_pow_fma 3ms 0.0023% 81.76% 2647ms 2.01% VecCopy_Seq (partial-inline) 13ms 0.0099% 81.77% 2357ms 1.79% VecAXPY 6ms 0.0045% 81.77% 2344ms 1.78% VecAXPY_Seq 2330ms 1.77% 83.54% 2330ms 1.77% daxpy_ 2ms 0.0015% 83.54% 2040ms 1.55% VecMDot 10ms 0.0076% 83.55% 2038ms 1.54% VecMXDot_Private 2013ms 1.53% 85.07% 2018ms 1.53% VecMDot_Seq 1ms 0.00076% 85.07% 2004ms 1.52% AbstractFeVolumeIntegralAssembler::DoAssemble 28ms 0.021% 85.09% 1658ms 1.26% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1553ms 1.18% 86.27% 1601ms 1.21% exp_inline (inline) 0 0% 86.27% 1379ms 1.04% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.27% 1290ms 0.98% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.27% 1290ms 0.98% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.27% 1290ms 0.98% boost_numeric_ublas_abs (inline) 1290ms 0.98% 87.25% 1290ms 0.98% std::abs (inline) 6ms 0.0045% 87.25% 1198ms 0.91% VecMAXPY 1187ms 0.9% 88.15% 1192ms 0.9% VecMAXPY_Seq 6ms 0.0045% 88.16% 1057ms 0.8% boost::numeric::ublas::matrix_assign (inline) 709ms 0.54% 88.69% 1052ms 0.8% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 246ms 0.19% 88.88% 1046ms 0.79% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.88% 1036ms 0.79% CuboidMeshConstructor::Construct 0 0% 88.88% 1035ms 0.78% AbstractTetrahedralMesh::ConstructRegularSlabMesh 5ms 0.0038% 88.88% 1035ms 0.78% DistributedTetrahedralMesh::ConstructCuboid 1014ms 0.77% 89.65% 1014ms 0.77% [libchaste_heart.so] 1ms 0.00076% 89.65% 915ms 0.69% Element::Element 2ms 0.0015% 89.65% 877ms 0.66% AbstractTetrahedralElement::CalculateJacobian 4ms 0.003% 89.66% 876ms 0.66% VecScale 12ms 0.0091% 89.67% 873ms 0.66% BidomainAssembler::ComputeMatrixTerm 2ms 0.0015% 89.67% 872ms 0.66% VecScale_Seq 868ms 0.66% 90.33% 868ms 0.66% dscal_ 1ms 0.00076% 90.33% 852ms 0.65% VecNorm 2ms 0.0015% 90.33% 847ms 0.64% VecNorm_Seq 11ms 0.0083% 90.34% 828ms 0.63% boost::numeric::ublas::c_matrix::c_matrix (inline) 3ms 0.0023% 90.34% 827ms 0.63% AbstractTetrahedralElement::AbstractTetrahedralElement 5ms 0.0038% 90.34% 825ms 0.63% AbstractBidomainSolver::FinaliseLinearSystem 229ms 0.17% 90.52% 817ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 808ms 0.61% 91.13% 808ms 0.61% __memset_avx2_unaligned_erms 0 0% 91.13% 798ms 0.6% PetscMemzero (inline) 2ms 0.0015% 91.13% 780ms 0.59% BidomainProblem::WriteOneStep 4ms 0.003% 91.13% 779ms 0.59% VecDuplicate 692ms 0.52% 91.66% 692ms 0.52% log_inline (inline)