File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12700ms, 84.44% of 15041ms total Dropped 738 nodes (cum <= 75.20ms) flat flat% sum% cum cum% 0 0% 0% 15031ms 99.93% __libc_start_call_main 0 0% 0% 15031ms 99.93% __libc_start_main_impl 0 0% 0% 15031ms 99.93% _start 0 0% 0% 15027ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 15027ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 15027ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 15027ms 99.91% main 0 0% 0% 14981ms 99.60% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14981ms 99.60% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14981ms 99.60% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 6ms 0.04% 0.04% 14959ms 99.45% AbstractCardiacProblem::Solve 4ms 0.027% 0.066% 11498ms 76.44% AbstractDynamicLinearPdeSolver::Solve 138ms 0.92% 0.98% 9053ms 60.19% AbstractCardiacTissue::SolveCellSystems 106ms 0.7% 1.69% 5435ms 36.13% AbstractCardiacCell::ComputeExceptVoltage 101ms 0.67% 2.36% 4729ms 31.44% AbstractOneStepIvpOdeSolver::InternalSolve 173ms 1.15% 3.51% 4045ms 26.89% EulerIvpOdeSolver::CalculateNextYValue 905ms 6.02% 9.53% 3838ms 25.52% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1775ms 11.80% 21.33% 3464ms 23.03% __GI___exp 4ms 0.027% 21.35% 3392ms 22.55% MonodomainProblem::WriteOneStep 1ms 0.0066% 21.36% 3237ms 21.52% H5Dwrite 2ms 0.013% 21.37% 3230ms 21.47% Hdf5DataWriter::PutVector 2ms 0.013% 21.39% 3210ms 21.34% H5D__write 119ms 0.79% 22.18% 2765ms 18.38% AbstractCardiacTissue::UpdateCaches (inline) 768ms 5.11% 27.29% 2579ms 17.15% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 27.30% 1921ms 12.77% H5D__chunk_collective_write 13ms 0.086% 27.39% 1919ms 12.76% H5F_set_coll_metadata_reads 16ms 0.11% 27.49% 1693ms 11.26% H5FD_s3comms_uriencode 1328ms 8.83% 36.32% 1622ms 10.78% __ieee754_exp_fma 4ms 0.027% 36.35% 1601ms 10.64% LinearSystem::Solve 1ms 0.0066% 36.35% 1491ms 9.91% KSPSolve 4ms 0.027% 36.38% 1490ms 9.91% KSPSolve_Private 4ms 0.027% 36.41% 1479ms 9.83% KSPSolve_CG 47ms 0.31% 36.72% 1297ms 8.62% 1ms 0.0066% 36.73% 1286ms 8.55% H5F__accum_write 0 0% 36.73% 1286ms 8.55% H5F_block_write 0 0% 36.73% 1286ms 8.55% H5PB_write 0 0% 36.73% 1285ms 8.54% H5FD_write 1ms 0.0066% 36.73% 1175ms 7.81% H5D__mpio_select_write 10ms 0.066% 36.80% 1156ms 7.69% H5D__chunk_cacheable 0 0% 36.80% 1082ms 7.19% PMPI_File_write_at_all 1057ms 7.03% 43.83% 1061ms 7.05% __GI_pwritev64 322ms 2.14% 45.97% 995ms 6.62% H5S_select_iterate 3ms 0.02% 45.99% 954ms 6.34% std::pow (inline) 111ms 0.74% 46.73% 951ms 6.32% __pow 83ms 0.55% 47.28% 839ms 5.58% __ieee754_pow_fma 381ms 2.53% 49.81% 823ms 5.47% MonodomainSolver::SetupLinearSystem 2ms 0.013% 49.82% 823ms 5.47% PCApply 1ms 0.0066% 49.83% 819ms 5.45% PCApply_BJacobi_Singleblock 0 0% 49.83% 780ms 5.19% KSPSolve_PREONLY 1ms 0.0066% 49.84% 776ms 5.16% PCApply_ICC 1ms 0.0066% 49.84% 775ms 5.15% MatSolve 763ms 5.07% 54.92% 774ms 5.15% MatSolve_SeqSBAIJ_1_NaturalOrdering 80ms 0.53% 55.45% 679ms 4.51% H5D__chunk_set_sizes 1ms 0.0066% 55.46% 616ms 4.10% MatMult 613ms 4.08% 59.53% 615ms 4.09% MatMult_SeqAIJ 0 0% 59.53% 529ms 3.52% KSP_PCApply.lto_priv.7 66ms 0.44% 59.97% 498ms 3.31% H5S_mpio_space_type 202ms 1.34% 61.31% 443ms 2.95% CellLuoRudy1991FromCellML::VerifyStateVariables 418ms 2.78% 64.09% 418ms 2.78% log_inline (inline) 1ms 0.0066% 64.10% 370ms 2.46% KSPConvergedDefault 296ms 1.97% 66.07% 308ms 2.05% exp_inline (inline) 0 0% 66.07% 295ms 1.96% KSP_PCApply 125ms 0.83% 66.90% 263ms 1.75% TimeStepper::TimeStepper 242ms 1.61% 68.51% 242ms 1.61% [libchaste_heart.so] 52ms 0.35% 68.85% 239ms 1.59% AbstractCardiacCell::SetVoltage (partial-inline) 180ms 1.20% 70.05% 237ms 1.58% top12 (inline) 12ms 0.08% 70.13% 230ms 1.53% H5VM_chunk_index 62ms 0.41% 70.54% 224ms 1.49% __GI___libc_malloc 172ms 1.14% 71.68% 210ms 1.40% _int_malloc 12ms 0.08% 71.76% 196ms 1.30% ompi_datatype_destroy 3ms 0.02% 71.78% 189ms 1.26% MPI_Type_free 30ms 0.2% 71.98% 189ms 1.26% __GI___libc_free 7ms 0.047% 72.03% 181ms 1.20% ompi_datatype_create 175ms 1.16% 73.19% 175ms 1.16% ddot_ 4ms 0.027% 73.22% 169ms 1.12% ompi_info_register_framework_params 37ms 0.25% 73.47% 168ms 1.12% ompi_datatype_release_args 120ms 0.8% 74.26% 166ms 1.10% AbstractOneStepIvpOdeSolver::Solve 134ms 0.89% 75.15% 163ms 1.08% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0066% 75.16% 158ms 1.05% Hdf5DataWriter::PutUnlimitedVariable 58ms 0.39% 75.55% 158ms 1.05% _int_free 156ms 1.04% 76.58% 156ms 1.04% asuint64 (inline) 119ms 0.79% 77.38% 142ms 0.94% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 34ms 0.23% 77.60% 131ms 0.87% H5S_set_version 55ms 0.37% 77.97% 128ms 0.85% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 97ms 0.64% 78.61% 128ms 0.85% AbstractParameterisedSystem::GetAnyVariable 123ms 0.82% 79.43% 123ms 0.82% TimeStepper::CalculateNextTime 122ms 0.81% 80.24% 122ms 0.81% __ieee754_log_fma 56ms 0.37% 80.61% 121ms 0.8% H5S_hyper_add_span_element 2ms 0.013% 80.63% 118ms 0.78% VecNorm 115ms 0.76% 81.39% 115ms 0.76% H5VM_chunk_index_scaled 3ms 0.02% 81.41% 114ms 0.76% PMPI_Type_create_resized 112ms 0.74% 82.16% 112ms 0.74% __memcpy_avx_unaligned_erms 0 0% 82.16% 110ms 0.73% VecNorm_Seq 1ms 0.0066% 82.16% 108ms 0.72% PMPI_File_set_view 104ms 0.69% 82.85% 104ms 0.69% H5VM_array_offset_pre 32ms 0.21% 83.07% 104ms 0.69% ompi_datatype_set_args 1ms 0.0066% 83.07% 103ms 0.68% VecTDot 0 0% 83.07% 101ms 0.67% VecTDot_Seq 1ms 0.0066% 83.08% 101ms 0.67% VecXDot_Seq_Private.constprop.0 26ms 0.17% 83.25% 100ms 0.66% AbstractCardiacCell::GetVoltage (partial-inline) 35ms 0.23% 83.49% 97ms 0.64% H5VM_array_calc 5ms 0.033% 83.52% 95ms 0.63% H5D__chunk_allocated 26ms 0.17% 83.69% 92ms 0.61% __libc_calloc 2ms 0.013% 83.70% 90ms 0.6% ompi_datatype_duplicate 1ms 0.0066% 83.71% 89ms 0.59% H5D__select_write 1ms 0.0066% 83.72% 88ms 0.59% H5Dgather 0 0% 83.72% 86ms 0.57% H5D__contig_fill 2ms 0.013% 83.73% 86ms 0.57% H5VM_opvv 4ms 0.027% 83.76% 85ms 0.57% MPI_Type_create_hindexed 0 0% 83.76% 84ms 0.56% H5D__contig_write 5ms 0.033% 83.79% 84ms 0.56% opal_datatype_create_desc 83ms 0.55% 84.34% 83ms 0.55% std::isinf (inline) 4ms 0.027% 84.37% 82ms 0.55% PMPI_Type_vector 9ms 0.06% 84.43% 82ms 0.55% opal_dss_print_buffer_contents 1ms 0.0066% 84.44% 78ms 0.52% PMPI_File_write_at 0 0% 84.44% 78ms 0.52% VecDuplicate 0 0% 84.44% 78ms 0.52% VecDuplicate_MPI 0 0% 84.44% 77ms 0.51% std::vector::_M_assign_aux (inline) 0 0% 84.44% 77ms 0.51% std::vector::assign (inline)