File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 112241ms, 92.00% of 122000ms total Dropped 1115 nodes (cum <= 610ms) flat flat% sum% cum cum% 0 0% 0% 121985ms 100% __libc_start_call_main 0 0% 0% 121985ms 100% __libc_start_main_impl 0 0% 0% 121985ms 100% _start 0 0% 0% 121982ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 121982ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 121982ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 121982ms 100% main 0 0% 0% 121945ms 100% AbstractConvergenceTester::Converge 0 0% 0% 121945ms 100% CxxTest::RealTestDescription::run 0 0% 0% 121945ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 121945ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 121945ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 121945ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0033% 0.0033% 120695ms 98.93% AbstractCardiacProblem::Solve 7ms 0.0057% 0.009% 119880ms 98.26% AbstractDynamicLinearPdeSolver::Solve 2ms 0.0016% 0.011% 66096ms 54.18% LinearSystem::Solve 0 0% 0.011% 65506ms 53.69% KSPSolve 10ms 0.0082% 0.019% 65506ms 53.69% KSPSolve_Private 11ms 0.009% 0.028% 65098ms 53.36% KSPSolve_SYMMLQ 210ms 0.17% 0.2% 44998ms 36.88% AbstractCardiacTissue::SolveCellSystems 5ms 0.0041% 0.2% 36357ms 29.80% PCApply 4ms 0.0033% 0.21% 36345ms 29.79% PCApply_BJacobi_Singleblock 1323ms 1.08% 1.29% 35049ms 28.73% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 1.29% 33892ms 27.78% KSPSolve_PREONLY 1ms 0.00082% 1.29% 32763ms 26.85% PCApply_ICC 2ms 0.0016% 1.29% 32762ms 26.85% MatSolve 32272ms 26.45% 27.75% 32760ms 26.85% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 3ms 0.0025% 27.75% 31459ms 25.79% KSP_PCApply.lto_priv.18 6934ms 5.68% 33.43% 30784ms 25.23% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0066% 33.44% 22803ms 18.69% MatMult 306ms 0.25% 33.69% 22795ms 18.68% MatMult_SeqAIJ (partial-inline) 22272ms 18.26% 51.95% 22793ms 18.68% MatMult_SeqAIJ_Inode (inline) 2004ms 1.64% 53.59% 15381ms 12.61% CardiacNewtonSolver::Solve 476ms 0.39% 53.98% 9114ms 7.47% AbstractCardiacTissue::UpdateCaches (inline) 4730ms 3.88% 57.86% 9056ms 7.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1357ms 1.11% 58.97% 8962ms 7.35% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 2011ms 1.65% 60.62% 8434ms 6.91% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1047ms 0.86% 61.47% 7747ms 6.35% BidomainSolver::SetupLinearSystem 7367ms 6.04% 67.51% 7367ms 6.04% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 67.51% 6961ms 5.71% KSP_PCApply (partial-inline) 11ms 0.009% 67.52% 6407ms 5.25% KSPConvergedDefault 4020ms 3.30% 70.82% 4072ms 3.34% __ieee754_log_fma 0 0% 70.82% 3883ms 3.18% boost::numeric::ublas::norm_inf (inline) 2703ms 2.22% 73.03% 3883ms 3.18% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 73.03% 3883ms 3.18% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 73.03% 3883ms 3.18% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0057% 73.04% 3399ms 2.79% MatNullSpaceRemove 18ms 0.015% 73.05% 3241ms 2.66% std::pow (inline) 416ms 0.34% 73.39% 3209ms 2.63% __pow 3143ms 2.58% 75.97% 3143ms 2.58% __memcpy_avx_unaligned_erms 0 0% 75.97% 3120ms 2.56% PetscMemcpy (inline) 2889ms 2.37% 78.34% 2889ms 2.37% ddot_ 1649ms 1.35% 79.69% 2780ms 2.28% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 361ms 0.3% 79.99% 2777ms 2.28% __ieee754_pow_fma 22ms 0.018% 80.00% 2660ms 2.18% VecCopy 4ms 0.0033% 80.01% 2636ms 2.16% VecCopy_Seq (partial-inline) 18ms 0.015% 80.02% 2507ms 2.05% VecAXPY 8ms 0.0066% 80.03% 2489ms 2.04% VecAXPY_Seq 2464ms 2.02% 82.05% 2464ms 2.02% daxpy_ 2ms 0.0016% 82.05% 2384ms 1.95% VecDot 0 0% 82.05% 2382ms 1.95% VecDot_Seq 3ms 0.0025% 82.05% 2382ms 1.95% VecXDot_Seq_Private.constprop.0 2ms 0.0016% 82.05% 2071ms 1.70% AbstractFeVolumeIntegralAssembler::DoAssemble 4ms 0.0033% 82.06% 1899ms 1.56% VecMDot 8ms 0.0066% 82.06% 1895ms 1.55% VecMXDot_Private 1878ms 1.54% 83.60% 1884ms 1.54% VecMDot_Seq 23ms 0.019% 83.62% 1743ms 1.43% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1586ms 1.30% 84.92% 1644ms 1.35% exp_inline (inline) 9ms 0.0074% 84.93% 1493ms 1.22% VecMAXPY 1476ms 1.21% 86.14% 1484ms 1.22% VecMAXPY_Seq 0 0% 86.14% 1422ms 1.17% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1364ms 1.12% 87.26% 1364ms 1.12% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 3ms 0.0025% 87.26% 1331ms 1.09% KSP_RemoveNullSpace (inline) 0 0% 87.26% 1100ms 0.9% CuboidMeshConstructor::Construct 0 0% 87.26% 1099ms 0.9% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0016% 87.26% 1099ms 0.9% DistributedTetrahedralMesh::ConstructCuboid 5ms 0.0041% 87.27% 1092ms 0.9% boost::numeric::ublas::matrix_assign (inline) 215ms 0.18% 87.44% 1079ms 0.88% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.44% 1079ms 0.88% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.44% 1079ms 0.88% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.44% 1079ms 0.88% boost_numeric_ublas_abs (inline) 1079ms 0.88% 88.33% 1079ms 0.88% std::abs (inline) 1054ms 0.86% 89.19% 1054ms 0.86% __memset_avx2_unaligned_erms 0 0% 89.19% 1047ms 0.86% PetscMemzero (inline) 747ms 0.61% 89.80% 1015ms 0.83% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00082% 89.80% 1004ms 0.82% Element::Element 4ms 0.0033% 89.81% 999ms 0.82% AbstractTetrahedralElement::CalculateJacobian 5ms 0.0041% 89.81% 946ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 1ms 0.00082% 89.81% 924ms 0.76% VecDuplicate 859ms 0.7% 90.52% 859ms 0.7% [libchaste_heart.so] 5ms 0.0041% 90.52% 845ms 0.69% BidomainAssembler::ComputeMatrixTerm 9ms 0.0074% 90.53% 839ms 0.69% VecScale 2ms 0.0016% 90.53% 830ms 0.68% VecScale_Seq 827ms 0.68% 91.21% 827ms 0.68% dscal_ 2ms 0.0016% 91.21% 822ms 0.67% VecNorm 8ms 0.0066% 91.21% 820ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.0016% 91.22% 815ms 0.67% VecNorm_Seq 12ms 0.0098% 91.23% 765ms 0.63% PetscMallocA 7ms 0.0057% 91.23% 753ms 0.62% PetscMallocAlign (partial-inline) 2ms 0.0016% 91.23% 738ms 0.6% BidomainProblem::WriteOneStep 736ms 0.6% 91.84% 736ms 0.6% log_inline (inline) 3ms 0.0025% 91.84% 729ms 0.6% AbstractBidomainSolver::FinaliseLinearSystem 197ms 0.16% 92.00% 726ms 0.6% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 92.00% 649ms 0.53% AbstractFeAssemblerInterface::Assemble (inline)