File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12619ms, 85.03% of 14840ms total Dropped 765 nodes (cum <= 74.20ms) flat flat% sum% cum cum% 0 0% 0% 14832ms 99.95% __libc_start_call_main 0 0% 0% 14832ms 99.95% __libc_start_main_impl 0 0% 0% 14832ms 99.95% _start 0 0% 0% 14829ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14829ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14829ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14829ms 99.93% main 0 0% 0% 14796ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14796ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14796ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14774ms 99.56% AbstractCardiacProblem::Solve 1ms 0.0067% 0.0067% 11478ms 77.35% AbstractDynamicLinearPdeSolver::Solve 50ms 0.34% 0.34% 9182ms 61.87% AbstractCardiacTissue::SolveCellSystems 139ms 0.94% 1.28% 5672ms 38.22% AbstractCardiacCell::ComputeExceptVoltage 184ms 1.24% 2.52% 4843ms 32.63% AbstractOneStepIvpOdeSolver::InternalSolve 180ms 1.21% 3.73% 4103ms 27.65% EulerIvpOdeSolver::CalculateNextYValue 856ms 5.77% 9.50% 3863ms 26.03% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1766ms 11.90% 21.40% 3560ms 23.99% __GI___exp 0 0% 21.40% 3234ms 21.79% MonodomainProblem::WriteOneStep 2ms 0.013% 21.42% 3092ms 20.84% Hdf5DataWriter::PutVector 3ms 0.02% 21.44% 3085ms 20.79% H5Dwrite 5ms 0.034% 21.47% 3047ms 20.53% H5D__write 96ms 0.65% 22.12% 2618ms 17.64% AbstractCardiacTissue::UpdateCaches (inline) 820ms 5.53% 27.64% 2479ms 16.70% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 27.65% 1822ms 12.28% H5D__chunk_collective_write 13ms 0.088% 27.74% 1822ms 12.28% H5F_set_coll_metadata_reads 1601ms 10.79% 38.52% 1723ms 11.61% __ieee754_exp_fma 21ms 0.14% 38.67% 1615ms 10.88% H5FD_s3comms_uriencode 4ms 0.027% 38.69% 1534ms 10.34% LinearSystem::Solve 0 0% 38.69% 1395ms 9.40% KSPSolve 4ms 0.027% 38.72% 1395ms 9.40% KSPSolve_Private 5ms 0.034% 38.75% 1373ms 9.25% KSPSolve_CG 0 0% 38.75% 1222ms 8.23% H5F_block_write 5ms 0.034% 38.79% 1222ms 8.23% H5PB_write 46ms 0.31% 39.10% 1220ms 8.22% 1ms 0.0067% 39.10% 1216ms 8.19% H5FD_write 0 0% 39.10% 1216ms 8.19% H5F__accum_write 0 0% 39.10% 1139ms 7.68% H5D__mpio_select_write 6ms 0.04% 39.14% 1110ms 7.48% H5D__chunk_cacheable 2ms 0.013% 39.16% 1044ms 7.04% PMPI_File_write_at_all 1016ms 6.85% 46.00% 1017ms 6.85% __GI_pwritev64 402ms 2.71% 48.71% 976ms 6.58% H5S_select_iterate 6ms 0.04% 48.75% 867ms 5.84% std::pow (inline) 75ms 0.51% 49.26% 861ms 5.80% __pow 100ms 0.67% 49.93% 785ms 5.29% __ieee754_pow_fma 321ms 2.16% 52.10% 738ms 4.97% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 52.10% 712ms 4.80% PCApply 0 0% 52.10% 710ms 4.78% PCApply_BJacobi_Singleblock 322ms 2.17% 54.27% 681ms 4.59% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0067% 54.28% 676ms 4.56% KSPSolve_PREONLY 2ms 0.013% 54.29% 673ms 4.54% MatSolve 0 0% 54.29% 673ms 4.54% PCApply_ICC 663ms 4.47% 58.76% 671ms 4.52% MatSolve_SeqSBAIJ_1_NaturalOrdering 1ms 0.0067% 58.77% 637ms 4.29% MatMult 633ms 4.27% 63.03% 636ms 4.29% MatMult_SeqAIJ 55ms 0.37% 63.40% 583ms 3.93% H5D__chunk_set_sizes 4ms 0.027% 63.43% 557ms 3.75% KSP_PCApply.lto_priv.7 62ms 0.42% 63.85% 489ms 3.30% H5S_mpio_space_type 369ms 2.49% 66.33% 369ms 2.49% log_inline (inline) 279ms 1.88% 68.21% 279ms 1.88% exp_inline (inline) 142ms 0.96% 69.17% 269ms 1.81% TimeStepper::TimeStepper 3ms 0.02% 69.19% 226ms 1.52% KSPConvergedDefault 44ms 0.3% 69.49% 208ms 1.40% __GI___libc_malloc 163ms 1.10% 70.59% 188ms 1.27% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 150ms 1.01% 71.60% 186ms 1.25% _int_malloc 43ms 0.29% 71.89% 185ms 1.25% AbstractCardiacCell::SetVoltage (partial-inline) 13ms 0.088% 71.97% 182ms 1.23% H5VM_chunk_index 180ms 1.21% 73.19% 180ms 1.21% [libchaste_heart.so] 100ms 0.67% 73.86% 175ms 1.18% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 137ms 0.92% 74.78% 174ms 1.17% AbstractOneStepIvpOdeSolver::Solve 15ms 0.1% 74.89% 172ms 1.16% ompi_datatype_create 8ms 0.054% 74.94% 166ms 1.12% MPI_Type_free 8ms 0.054% 74.99% 163ms 1.10% ompi_datatype_destroy 46ms 0.31% 75.30% 163ms 1.10% std::__cxx11::basic_string::basic_string 0 0% 75.30% 161ms 1.08% KSP_PCApply 36ms 0.24% 75.55% 159ms 1.07% __GI___libc_free 95ms 0.64% 76.19% 157ms 1.06% top12 (inline) 45ms 0.3% 76.49% 147ms 0.99% ompi_datatype_release_args 3ms 0.02% 76.51% 147ms 0.99% ompi_info_register_framework_params 1ms 0.0067% 76.52% 142ms 0.96% Hdf5DataWriter::PutUnlimitedVariable 133ms 0.9% 77.41% 133ms 0.9% TimeStepper::CalculateNextTime 61ms 0.41% 77.82% 125ms 0.84% H5S_hyper_add_span_element 52ms 0.35% 78.17% 123ms 0.83% _int_free 122ms 0.82% 79.00% 122ms 0.82% std::isinf (inline) 2ms 0.013% 79.01% 116ms 0.78% PMPI_Type_create_resized 114ms 0.77% 79.78% 114ms 0.77% ddot_ 113ms 0.76% 80.54% 113ms 0.76% __ieee754_log_fma 101ms 0.68% 81.22% 111ms 0.75% AbstractParameterisedSystem::SetAnyVariable 12ms 0.081% 81.30% 110ms 0.74% H5S_set_version 2ms 0.013% 81.31% 109ms 0.73% PMPI_File_set_view 1ms 0.0067% 81.32% 104ms 0.7% ompi_datatype_duplicate 0 0% 81.32% 103ms 0.69% VecDuplicate 2ms 0.013% 81.33% 103ms 0.69% VecDuplicate_MPI 103ms 0.69% 82.03% 103ms 0.69% __memcpy_avx_unaligned_erms 7ms 0.047% 82.08% 99ms 0.67% std::char_traits::length (inline) 40ms 0.27% 82.35% 98ms 0.66% H5VM_array_calc 3ms 0.02% 82.37% 98ms 0.66% VecNorm 95ms 0.64% 83.01% 95ms 0.64% __strlen_avx2 93ms 0.63% 83.63% 93ms 0.63% H5VM_array_offset_pre 1ms 0.0067% 83.64% 86ms 0.58% VecNorm_Seq 67ms 0.45% 84.09% 83ms 0.56% AbstractParameterisedSystem::GetAnyVariable 27ms 0.18% 84.27% 83ms 0.56% ompi_datatype_set_args 37ms 0.25% 84.52% 76ms 0.51% AbstractCardiacCell::GetVoltage (partial-inline) 76ms 0.51% 85.03% 76ms 0.51% H5VM_chunk_index_scaled