File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 382ms, 86.62% of 441ms total Dropped 192 nodes (cum <= 2.21ms) flat flat% sum% cum cum% 0 0% 0% 433ms 98.19% __libc_start_call_main 0 0% 0% 433ms 98.19% __libc_start_main_impl 0 0% 0% 433ms 98.19% _start 0 0% 0% 430ms 97.51% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 430ms 97.51% CxxTest::TestRunner::runAllTests 0 0% 0% 430ms 97.51% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 430ms 97.51% main 0 0% 0% 395ms 89.57% CxxTest::RealTestDescription::run 0 0% 0% 395ms 89.57% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 395ms 89.57% CxxTest::TestRunner::runTest (inline) 0 0% 0% 395ms 89.57% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 395ms 89.57% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 391ms 88.66% AbstractCardiacProblem::Solve 0 0% 0% 391ms 88.66% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 347ms 78.68% LinearSystem::Solve 0 0% 0% 344ms 78.00% KSPSolve 0 0% 0% 344ms 78.00% KSPSolve_CG 2ms 0.45% 0.45% 344ms 78.00% KSPSolve_Private 0 0% 0.45% 196ms 44.44% KSP_PCApply.lto_priv.7 0 0% 0.45% 189ms 42.86% PCApply 0 0% 0.45% 189ms 42.86% PCApply_BJacobi_Singleblock 0 0% 0.45% 157ms 35.60% KSPSolve_PREONLY (partial-inline) 0 0% 0.45% 149ms 33.79% MatSolve 148ms 33.56% 34.01% 149ms 33.79% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 34.01% 149ms 33.79% PCApply_ICC 0 0% 34.01% 70ms 15.87% MatMult 9ms 2.04% 36.05% 70ms 15.87% MatMult_SeqAIJ (partial-inline) 61ms 13.83% 49.89% 70ms 15.87% MatMult_SeqAIJ_Inode (inline) 51ms 11.56% 61.45% 51ms 11.56% ddot_ 0 0% 61.45% 39ms 8.84% AbstractCardiacTissue::SolveCellSystems 1ms 0.23% 61.68% 38ms 8.62% VecTDot 0 0% 61.68% 37ms 8.39% VecTDot_Seq 0 0% 61.68% 37ms 8.39% VecXDot_Seq_Private.constprop.0 0 0% 61.68% 32ms 7.26% CxxTest::RealWorldDescription::setUp 0 0% 61.68% 32ms 7.26% PetscInitialize 0 0% 61.68% 32ms 7.26% PetscSetup::setUpWorld 0 0% 61.68% 32ms 7.26% PetscSetupUtils::CommonSetup 0 0% 61.68% 32ms 7.26% PetscSetupUtils::InitialisePetsc 0 0% 61.68% 31ms 7.03% PMPI_Init_thread 0 0% 61.68% 31ms 7.03% ompi_mpi_init 1ms 0.23% 61.90% 30ms 6.80% MatNullSpaceRemove 0 0% 61.90% 25ms 5.67% 0 0% 61.90% 23ms 5.22% orte_init 0 0% 61.90% 22ms 4.99% VecMDot 22ms 4.99% 66.89% 22ms 4.99% VecMDot_Seq 0 0% 66.89% 22ms 4.99% VecMXDot_Private 1ms 0.23% 67.12% 20ms 4.54% AbstractCardiacCell::ComputeExceptVoltage 0 0% 67.12% 18ms 4.08% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 67.12% 15ms 3.40% VecNorm 0 0% 67.12% 15ms 3.40% VecNorm_Seq 8ms 1.81% 68.93% 15ms 3.40% __GI___exp 0 0% 68.93% 15ms 3.40% hwloc_topology_load 1ms 0.23% 69.16% 14ms 3.17% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.68% 69.84% 14ms 3.17% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.84% 14ms 3.17% EulerIvpOdeSolver::CalculateNextYValue 0 0% 69.84% 14ms 3.17% hwloc_linux_get_tid_last_cpu_location 4ms 0.91% 70.75% 13ms 2.95% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.23% 70.98% 12ms 2.72% VecAYPX 11ms 2.49% 73.47% 11ms 2.49% VecAYPX_Seq 0 0% 73.47% 11ms 2.49% __GI__dl_catch_exception 0 0% 73.47% 11ms 2.49% _dl_catch_error 0 0% 73.47% 11ms 2.49% _dlerror_run 0 0% 73.47% 11ms 2.49% mca_base_framework_open 0 0% 73.47% 10ms 2.27% KSP_PCApply (partial-inline) 0 0% 73.47% 10ms 2.27% VecAXPY 0 0% 73.47% 10ms 2.27% VecAXPY_Seq 0 0% 73.47% 10ms 2.27% opal_stackframe_output 9ms 2.04% 75.51% 9ms 2.04% daxpy_ 0 0% 75.51% 9ms 2.04% mca_base_framework_register 0 0% 75.51% 8ms 1.81% VecDuplicate 0 0% 75.51% 8ms 1.81% VecDuplicate_Seq 0 0% 75.51% 8ms 1.81% ___dlopen 0 0% 75.51% 8ms 1.81% _dl_init 0 0% 75.51% 8ms 1.81% _dl_open 0 0% 75.51% 8ms 1.81% _dl_start_user 0 0% 75.51% 8ms 1.81% call_init (inline) 0 0% 75.51% 8ms 1.81% dl_open_worker 0 0% 75.51% 8ms 1.81% dl_open_worker_begin 0 0% 75.51% 8ms 1.81% dlopen_doit 0 0% 75.51% 8ms 1.81% dlopen_implementation (inline) 0 0% 75.51% 8ms 1.81% mca_base_framework_components_register 0 0% 75.51% 7ms 1.59% VecMAXPY 7ms 1.59% 77.10% 7ms 1.59% VecMAXPY_Seq 0 0% 77.10% 7ms 1.59% mca_base_component_find 0 0% 77.10% 7ms 1.59% mca_base_component_repository_open 1ms 0.23% 77.32% 6ms 1.36% PetscMallocA 5ms 1.13% 78.46% 6ms 1.36% __ieee754_exp_fma 0 0% 78.46% 6ms 1.36% _dl_lookup_symbol_x 1ms 0.23% 78.68% 6ms 1.36% boost::serialization::singleton::get_instance 0 0% 78.68% 6ms 1.36% opal_hwloc_base_get_topology 0 0% 78.68% 6ms 1.36% orte_ess_base_proc_binding 1ms 0.23% 78.91% 5ms 1.13% KSPConvergedDefault 1ms 0.23% 79.14% 5ms 1.13% PetscMallocAlign 2ms 0.45% 79.59% 5ms 1.13% _dl_map_object 0 0% 79.59% 5ms 1.13% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 79.59% 5ms 1.13% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 79.59% 5ms 1.13% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 4ms 0.91% 80.50% 5ms 1.13% do_lookup_x 0 0% 80.50% 4ms 0.91% AbstractCardiacProblem::Initialise 0 0% 80.50% 4ms 0.91% BidomainSolver::SetupLinearSystem 1ms 0.23% 80.73% 4ms 0.91% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 80.73% 4ms 0.91% PetscMemcpy (inline) 1ms 0.23% 80.95% 4ms 0.91% VecCopy 0 0% 80.95% 4ms 0.91% XOpenDisplay 0 0% 80.95% 4ms 0.91% [hwloc_gl.so] 0 0% 80.95% 4ms 0.91% _XConnectXCB 4ms 0.91% 81.86% 4ms 0.91% __GI___libc_read 4ms 0.91% 82.77% 4ms 0.91% __memcpy_avx_unaligned_erms 2ms 0.45% 83.22% 4ms 0.91% __pow 0 0% 83.22% 4ms 0.91% _dl_fixup 0 0% 83.22% 4ms 0.91% _dl_runtime_resolve_xsavec 3ms 0.68% 83.90% 4ms 0.91% _int_malloc 0 0% 83.90% 4ms 0.91% std::pow (inline) 0 0% 83.90% 3ms 0.68% CxxTest::RealWorldDescription::tearDown 0 0% 83.90% 3ms 0.68% PetscFinalize 0 0% 83.90% 3ms 0.68% PetscHeaderDestroy_Private 0 0% 83.90% 3ms 0.68% PetscSetup::tearDownWorld 0 0% 83.90% 3ms 0.68% PetscSetupUtils::CommonFinalize 3ms 0.68% 84.58% 3ms 0.68% TimeStepper::CalculateNextTime 1ms 0.23% 84.81% 3ms 0.68% TimeStepper::TimeStepper 0 0% 84.81% 3ms 0.68% VecCopy_Seq (partial-inline) 0 0% 84.81% 3ms 0.68% VecCreate 0 0% 84.81% 3ms 0.68% VecCreate_Seq 0 0% 84.81% 3ms 0.68% VecDestroy 0 0% 84.81% 3ms 0.68% VecSetType 0 0% 84.81% 3ms 0.68% [libxcb.so.1.1.0] 0 0% 84.81% 3ms 0.68% __GI___libc_malloc 0 0% 84.81% 3ms 0.68% __GI_exit 0 0% 84.81% 3ms 0.68% __cxa_finalize 0 0% 84.81% 3ms 0.68% __dlclose 3ms 0.68% 85.49% 3ms 0.68% __libc_openat64 0 0% 85.49% 3ms 0.68% __posix_memalign 0 0% 85.49% 3ms 0.68% __run_exit_handlers 3ms 0.68% 86.17% 3ms 0.68% __strcmp_avx2 0 0% 86.17% 3ms 0.68% _dl_call_fini 0 0% 86.17% 3ms 0.68% _dl_close 0 0% 86.17% 3ms 0.68% _dl_close_worker (inline) 0 0% 86.17% 3ms 0.68% _dl_fini 0 0% 86.17% 3ms 0.68% _dl_map_object_deps 0 0% 86.17% 3ms 0.68% _dl_map_object_from_fd 1ms 0.23% 86.39% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.23% 86.62% 3ms 0.68% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 86.62% 3ms 0.68% mca_base_component_repository_release 0 0% 86.62% 3ms 0.68% mca_base_framework_components_open 0 0% 86.62% 3ms 0.68% mca_base_var_group_register 0 0% 86.62% 3ms 0.68% mca_base_var_register 0 0% 86.62% 3ms 0.68% mca_topo_base_dist_graph_neighbors_count 0 0% 86.62% 3ms 0.68% ompi_mpi_finalize 0 0% 86.62% 3ms 0.68% xcb_connect_to_display_with_auth_info