File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 110017ms, 91.96% of 119630ms total Dropped 1153 nodes (cum <= 598.15ms) flat flat% sum% cum cum% 0 0% 0% 119617ms 100% __libc_start_call_main 0 0% 0% 119617ms 100% __libc_start_main_impl 0 0% 0% 119617ms 100% _start 0 0% 0% 119614ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 119614ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 119614ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 119614ms 100% main 0 0% 0% 119578ms 100% AbstractConvergenceTester::Converge 0 0% 0% 119578ms 100% CxxTest::RealTestDescription::run 0 0% 0% 119578ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 119578ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 119578ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 119578ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0033% 0.0033% 118334ms 98.92% AbstractCardiacProblem::Solve 11ms 0.0092% 0.013% 117542ms 98.25% AbstractDynamicLinearPdeSolver::Solve 6ms 0.005% 0.018% 66046ms 55.21% LinearSystem::Solve 3ms 0.0025% 0.02% 65545ms 54.79% KSPSolve 6ms 0.005% 0.025% 65543ms 54.79% KSPSolve_Private 11ms 0.0092% 0.034% 65120ms 54.43% KSPSolve_SYMMLQ 218ms 0.18% 0.22% 42709ms 35.70% AbstractCardiacTissue::SolveCellSystems 4ms 0.0033% 0.22% 36923ms 30.86% PCApply 2ms 0.0017% 0.22% 36909ms 30.85% PCApply_BJacobi_Singleblock 0 0% 0.22% 34312ms 28.68% KSPSolve_PREONLY (partial-inline) 3ms 0.0025% 0.22% 33236ms 27.78% PCApply_ICC 6ms 0.005% 0.23% 33233ms 27.78% MatSolve 32701ms 27.34% 27.56% 33227ms 27.77% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1391ms 1.16% 28.73% 32682ms 27.32% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0017% 28.73% 31877ms 26.65% KSP_PCApply.lto_priv.18 6844ms 5.72% 34.45% 28304ms 23.66% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0067% 34.46% 22068ms 18.45% MatMult 292ms 0.24% 34.70% 22060ms 18.44% MatMult_SeqAIJ (partial-inline) 21555ms 18.02% 52.72% 22059ms 18.44% MatMult_SeqAIJ_Inode (inline) 2013ms 1.68% 54.40% 14699ms 12.29% CardiacNewtonSolver::Solve 317ms 0.26% 54.67% 9175ms 7.67% AbstractCardiacTissue::UpdateCaches (inline) 1936ms 1.62% 56.28% 8679ms 7.25% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4462ms 3.73% 60.01% 8616ms 7.20% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1048ms 0.88% 60.89% 7734ms 6.46% BidomainSolver::SetupLinearSystem 1207ms 1.01% 61.90% 7394ms 6.18% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 2ms 0.0017% 61.90% 7003ms 5.85% KSP_PCApply (partial-inline) 4ms 0.0033% 61.90% 6475ms 5.41% KSPConvergedDefault 5937ms 4.96% 66.87% 5937ms 4.96% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3864ms 3.23% 70.10% 3901ms 3.26% __ieee754_log_fma 0 0% 70.10% 3651ms 3.05% boost::numeric::ublas::norm_inf (inline) 2475ms 2.07% 72.17% 3651ms 3.05% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.17% 3651ms 3.05% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.17% 3651ms 3.05% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 7ms 0.0059% 72.17% 3297ms 2.76% MatNullSpaceRemove 3295ms 2.75% 74.93% 3295ms 2.75% __memcpy_avx_unaligned_erms 0 0% 74.93% 3271ms 2.73% PetscMemcpy (inline) 23ms 0.019% 74.95% 3236ms 2.71% std::pow (inline) 401ms 0.34% 75.28% 3209ms 2.68% __pow 1792ms 1.50% 76.78% 2822ms 2.36% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 346ms 0.29% 77.07% 2800ms 2.34% __ieee754_pow_fma 20ms 0.017% 77.08% 2773ms 2.32% VecCopy 2764ms 2.31% 79.39% 2764ms 2.31% ddot_ 2ms 0.0017% 79.40% 2749ms 2.30% VecCopy_Seq (partial-inline) 18ms 0.015% 79.41% 2593ms 2.17% VecAXPY 8ms 0.0067% 79.42% 2575ms 2.15% VecAXPY_Seq 2553ms 2.13% 81.55% 2553ms 2.13% daxpy_ 4ms 0.0033% 81.56% 2238ms 1.87% VecDot 0 0% 81.56% 2234ms 1.87% VecDot_Seq 2ms 0.0017% 81.56% 2234ms 1.87% VecXDot_Seq_Private.constprop.0 1ms 0.00084% 81.56% 2079ms 1.74% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.0017% 81.56% 1851ms 1.55% VecMDot 16ms 0.013% 81.57% 1849ms 1.55% VecMXDot_Private 1825ms 1.53% 83.10% 1829ms 1.53% VecMDot_Seq 27ms 0.023% 83.12% 1695ms 1.42% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1633ms 1.37% 84.49% 1688ms 1.41% exp_inline (inline) 1537ms 1.28% 85.77% 1537ms 1.28% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 8ms 0.0067% 85.78% 1439ms 1.20% VecMAXPY 1422ms 1.19% 86.97% 1431ms 1.20% VecMAXPY_Seq 0 0% 86.97% 1424ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1170ms 0.98% 87.94% 1170ms 0.98% __memset_avx2_unaligned_erms 0 0% 87.94% 1162ms 0.97% PetscMemzero (inline) 9ms 0.0075% 87.95% 1105ms 0.92% boost::numeric::ublas::matrix_assign (inline) 234ms 0.2% 88.15% 1094ms 0.91% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.15% 1091ms 0.91% CuboidMeshConstructor::Construct 0 0% 88.15% 1091ms 0.91% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.15% 1091ms 0.91% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.15% 1091ms 0.91% boost_numeric_ublas_abs (inline) 1091ms 0.91% 89.06% 1091ms 0.91% std::abs (inline) 0 0% 89.06% 1090ms 0.91% AbstractTetrahedralMesh::ConstructRegularSlabMesh 4ms 0.0033% 89.06% 1090ms 0.91% DistributedTetrahedralMesh::ConstructCuboid 739ms 0.62% 89.68% 1022ms 0.85% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00084% 89.68% 978ms 0.82% Element::Element 4ms 0.0033% 89.68% 960ms 0.8% AbstractTetrahedralElement::CalculateJacobian 4ms 0.0033% 89.69% 933ms 0.78% VecDuplicate 11ms 0.0092% 89.70% 924ms 0.77% VecScale 0 0% 89.70% 916ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.0017% 89.70% 913ms 0.76% VecScale_Seq 905ms 0.76% 90.46% 905ms 0.76% dscal_ 8ms 0.0067% 90.46% 861ms 0.72% BidomainAssembler::ComputeMatrixTerm 6ms 0.005% 90.47% 830ms 0.69% boost::numeric::ublas::c_matrix::c_matrix (inline) 805ms 0.67% 91.14% 805ms 0.67% [libchaste_heart.so] 11ms 0.0092% 91.15% 795ms 0.66% PetscMallocA 0 0% 91.15% 790ms 0.66% VecNorm 0 0% 91.15% 785ms 0.66% VecNorm_Seq 5ms 0.0042% 91.15% 784ms 0.66% PetscMallocAlign (partial-inline) 0 0% 91.15% 748ms 0.63% BidomainProblem::WriteOneStep 3ms 0.0025% 91.16% 741ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 240ms 0.2% 91.36% 738ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 727ms 0.61% 91.96% 727ms 0.61% log_inline (inline) 0 0% 91.96% 655ms 0.55% AbstractFeAssemblerInterface::Assemble (inline)