File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12734ms, 86.00% of 14807ms total Dropped 752 nodes (cum <= 74.03ms) flat flat% sum% cum cum% 0 0% 0% 14798ms 99.94% __libc_start_call_main 0 0% 0% 14798ms 99.94% __libc_start_main_impl 0 0% 0% 14798ms 99.94% _start 0 0% 0% 14795ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14795ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14795ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14795ms 99.92% main 0 0% 0% 14756ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14756ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14756ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 4ms 0.027% 0.027% 14734ms 99.51% AbstractCardiacProblem::Solve 2ms 0.014% 0.041% 11454ms 77.36% AbstractDynamicLinearPdeSolver::Solve 16ms 0.11% 0.15% 9182ms 62.01% AbstractCardiacTissue::SolveCellSystems 141ms 0.95% 1.10% 5652ms 38.17% AbstractCardiacCell::ComputeExceptVoltage 204ms 1.38% 2.48% 4862ms 32.84% AbstractOneStepIvpOdeSolver::InternalSolve 181ms 1.22% 3.70% 4122ms 27.84% EulerIvpOdeSolver::CalculateNextYValue 923ms 6.23% 9.93% 3884ms 26.23% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1749ms 11.81% 21.75% 3538ms 23.89% __GI___exp 0 0% 21.75% 3204ms 21.64% MonodomainProblem::WriteOneStep 0 0% 21.75% 3061ms 20.67% Hdf5DataWriter::PutVector 0 0% 21.75% 3057ms 20.65% H5Dwrite 7ms 0.047% 21.79% 3023ms 20.42% H5D__write 94ms 0.63% 22.43% 2732ms 18.45% AbstractCardiacTissue::UpdateCaches (inline) 888ms 6.00% 28.43% 2585ms 17.46% CellLuoRudy1991FromCellML::GetIIonic 0 0% 28.43% 1779ms 12.01% H5D__chunk_collective_write 21ms 0.14% 28.57% 1779ms 12.01% H5F_set_coll_metadata_reads 1547ms 10.45% 39.02% 1698ms 11.47% __ieee754_exp_fma 22ms 0.15% 39.16% 1582ms 10.68% H5FD_s3comms_uriencode 2ms 0.014% 39.18% 1545ms 10.43% LinearSystem::Solve 0 0% 39.18% 1402ms 9.47% KSPSolve 0 0% 39.18% 1402ms 9.47% KSPSolve_Private 5ms 0.034% 39.21% 1385ms 9.35% KSPSolve_CG 41ms 0.28% 39.49% 1227ms 8.29% 1ms 0.0068% 39.49% 1227ms 8.29% H5F_block_write 2ms 0.014% 39.51% 1226ms 8.28% H5PB_write 0 0% 39.51% 1224ms 8.27% H5FD_write 0 0% 39.51% 1224ms 8.27% H5F__accum_write 4ms 0.027% 39.54% 1146ms 7.74% H5D__mpio_select_write 10ms 0.068% 39.60% 1136ms 7.67% H5D__chunk_cacheable 1ms 0.0068% 39.61% 1049ms 7.08% PMPI_File_write_at_all 1019ms 6.88% 46.49% 1022ms 6.90% __GI_pwritev64 382ms 2.58% 49.07% 985ms 6.65% H5S_select_iterate 6ms 0.041% 49.11% 900ms 6.08% std::pow (inline) 83ms 0.56% 49.67% 894ms 6.04% __pow 91ms 0.61% 50.29% 810ms 5.47% __ieee754_pow_fma 1ms 0.0068% 50.29% 766ms 5.17% PCApply 2ms 0.014% 50.31% 757ms 5.11% PCApply_BJacobi_Singleblock 0 0% 50.31% 728ms 4.92% KSPSolve_PREONLY 4ms 0.027% 50.33% 724ms 4.89% MatSolve 0 0% 50.33% 724ms 4.89% PCApply_ICC 710ms 4.80% 55.13% 720ms 4.86% MatSolve_SeqSBAIJ_1_NaturalOrdering 314ms 2.12% 57.25% 710ms 4.80% MonodomainSolver::SetupLinearSystem 295ms 1.99% 59.24% 628ms 4.24% CellLuoRudy1991FromCellML::VerifyStateVariables 51ms 0.34% 59.59% 611ms 4.13% H5D__chunk_set_sizes 6ms 0.041% 59.63% 611ms 4.13% MatMult 603ms 4.07% 63.70% 605ms 4.09% MatMult_SeqAIJ 1ms 0.0068% 63.71% 585ms 3.95% KSP_PCApply.lto_priv.7 59ms 0.4% 64.10% 445ms 3.01% H5S_mpio_space_type 398ms 2.69% 66.79% 398ms 2.69% log_inline (inline) 275ms 1.86% 68.65% 277ms 1.87% exp_inline (inline) 128ms 0.86% 69.51% 242ms 1.63% TimeStepper::TimeStepper 0 0% 69.51% 236ms 1.59% KSPConvergedDefault 16ms 0.11% 69.62% 205ms 1.38% H5VM_chunk_index 42ms 0.28% 69.91% 203ms 1.37% __GI___libc_malloc 116ms 0.78% 70.69% 195ms 1.32% top12 (inline) 0 0% 70.69% 186ms 1.26% KSP_PCApply 142ms 0.96% 71.65% 184ms 1.24% _int_malloc 140ms 0.95% 72.59% 176ms 1.19% AbstractOneStepIvpOdeSolver::Solve 169ms 1.14% 73.74% 169ms 1.14% std::isinf (inline) 143ms 0.97% 74.70% 166ms 1.12% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 37ms 0.25% 74.95% 162ms 1.09% AbstractCardiacCell::SetVoltage (partial-inline) 86ms 0.58% 75.53% 162ms 1.09% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 156ms 1.05% 76.59% 156ms 1.05% [libchaste_heart.so] 4ms 0.027% 76.61% 154ms 1.04% ompi_datatype_create 3ms 0.02% 76.63% 148ms 1% ompi_datatype_destroy 3ms 0.02% 76.65% 145ms 0.98% MPI_Type_free 0 0% 76.65% 143ms 0.97% Hdf5DataWriter::PutUnlimitedVariable 22ms 0.15% 76.80% 138ms 0.93% __GI___libc_free 22ms 0.15% 76.95% 136ms 0.92% H5S_set_version 11ms 0.074% 77.02% 135ms 0.91% ompi_info_register_framework_params 35ms 0.24% 77.26% 133ms 0.9% ompi_datatype_release_args 132ms 0.89% 78.15% 132ms 0.89% TimeStepper::CalculateNextTime 132ms 0.89% 79.04% 132ms 0.89% ddot_ 122ms 0.82% 79.87% 122ms 0.82% __ieee754_log_fma 60ms 0.41% 80.27% 117ms 0.79% H5S_hyper_add_span_element 49ms 0.33% 80.60% 114ms 0.77% H5VM_array_calc 1ms 0.0068% 80.61% 113ms 0.76% PMPI_File_set_view 113ms 0.76% 81.37% 113ms 0.76% __memcpy_avx_unaligned_erms 43ms 0.29% 81.66% 113ms 0.76% _int_free 0 0% 81.66% 111ms 0.75% VecDuplicate 3ms 0.02% 81.68% 111ms 0.75% VecDuplicate_MPI 47ms 0.32% 82.00% 106ms 0.72% std::__cxx11::basic_string::basic_string 101ms 0.68% 82.68% 101ms 0.68% H5VM_chunk_index_scaled 90ms 0.61% 83.29% 97ms 0.66% AbstractParameterisedSystem::SetAnyVariable 1ms 0.0068% 83.30% 97ms 0.66% VecNorm 2ms 0.014% 83.31% 93ms 0.63% PMPI_Type_create_resized 92ms 0.62% 83.93% 92ms 0.62% [libm.so.6] 67ms 0.45% 84.39% 91ms 0.61% AbstractParameterisedSystem::GetAnyVariable 4ms 0.027% 84.41% 91ms 0.61% ompi_datatype_duplicate 89ms 0.6% 85.01% 89ms 0.6% H5VM_array_offset_pre 0 0% 85.01% 86ms 0.58% VecNorm_Seq 1ms 0.0068% 85.02% 81ms 0.55% VecTDot 81ms 0.55% 85.57% 81ms 0.55% asuint64 (inline) 28ms 0.19% 85.76% 79ms 0.53% __libc_calloc 0 0% 85.76% 78ms 0.53% VecTDot_Seq 0 0% 85.76% 78ms 0.53% VecXDot_Seq_Private.constprop.0 36ms 0.24% 86.00% 77ms 0.52% AbstractCardiacCell::GetVoltage (partial-inline)