File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 421ms, 88.08% of 478ms total Dropped 195 nodes (cum <= 2.39ms) flat flat% sum% cum cum% 0 0% 0% 471ms 98.54% __libc_start_call_main 0 0% 0% 471ms 98.54% __libc_start_main_impl 0 0% 0% 471ms 98.54% _start 0 0% 0% 468ms 97.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 468ms 97.91% CxxTest::TestRunner::runAllTests 0 0% 0% 468ms 97.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 468ms 97.91% main 0 0% 0% 429ms 89.75% CxxTest::RealTestDescription::run 0 0% 0% 429ms 89.75% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 429ms 89.75% CxxTest::TestRunner::runTest (inline) 0 0% 0% 429ms 89.75% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 429ms 89.75% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 424ms 88.70% AbstractCardiacProblem::Solve 0 0% 0% 423ms 88.49% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 392ms 82.01% LinearSystem::Solve 0 0% 0% 390ms 81.59% KSPSolve 0 0% 0% 390ms 81.59% KSPSolve_Private 0 0% 0% 389ms 81.38% KSPSolve_CG 1ms 0.21% 0.21% 240ms 50.21% KSP_PCApply.lto_priv.7 0 0% 0.21% 223ms 46.65% PCApply 0 0% 0.21% 223ms 46.65% PCApply_BJacobi_Singleblock 0 0% 0.21% 189ms 39.54% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 177ms 37.03% MatSolve 174ms 36.40% 36.61% 177ms 37.03% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.61% 177ms 37.03% PCApply_ICC 0 0% 36.61% 64ms 13.39% MatMult 0 0% 36.61% 64ms 13.39% MatMult_SeqAIJ 63ms 13.18% 49.79% 64ms 13.39% MatMult_SeqAIJ_Inode (inline) 58ms 12.13% 61.92% 58ms 12.13% ddot_ 2ms 0.42% 62.34% 40ms 8.37% MatNullSpaceRemove 0 0% 62.34% 35ms 7.32% CxxTest::RealWorldDescription::setUp 0 0% 62.34% 35ms 7.32% PetscInitialize 0 0% 62.34% 35ms 7.32% PetscSetup::setUpWorld 0 0% 62.34% 35ms 7.32% PetscSetupUtils::CommonSetup 0 0% 62.34% 35ms 7.32% PetscSetupUtils::InitialisePetsc 0 0% 62.34% 34ms 7.11% PMPI_Init_thread 1ms 0.21% 62.55% 34ms 7.11% VecTDot 0 0% 62.55% 34ms 7.11% ompi_mpi_init 0 0% 62.55% 33ms 6.90% VecTDot_Seq 0 0% 62.55% 33ms 6.90% VecXDot_Seq_Private.constprop.0 0 0% 62.55% 27ms 5.65% 0 0% 62.55% 27ms 5.65% VecNorm 0 0% 62.55% 27ms 5.65% VecNorm_Seq 0 0% 62.55% 26ms 5.44% AbstractCardiacTissue::SolveCellSystems 1ms 0.21% 62.76% 24ms 5.02% VecMDot 0 0% 62.76% 24ms 5.02% orte_init 1ms 0.21% 62.97% 23ms 4.81% VecMXDot_Private 22ms 4.60% 67.57% 22ms 4.60% VecMDot_Seq 0 0% 67.57% 16ms 3.35% __GI__dl_catch_exception 0 0% 67.57% 16ms 3.35% _dl_catch_error 0 0% 67.57% 16ms 3.35% _dlerror_run 0 0% 67.57% 15ms 3.14% hwloc_topology_load 0 0% 67.57% 14ms 2.93% KSP_PCApply (partial-inline) 0 0% 67.57% 14ms 2.93% VecMAXPY 14ms 2.93% 70.50% 14ms 2.93% VecMAXPY_Seq 0 0% 70.50% 14ms 2.93% hwloc_linux_get_tid_last_cpu_location 0 0% 70.50% 14ms 2.93% opal_stackframe_output 2ms 0.42% 70.92% 13ms 2.72% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 70.92% 13ms 2.72% mca_base_framework_open 0 0% 70.92% 13ms 2.72% mca_base_framework_register 1ms 0.21% 71.13% 12ms 2.51% VecAXPY 0 0% 71.13% 12ms 2.51% ___dlopen 0 0% 71.13% 12ms 2.51% _dl_open 0 0% 71.13% 12ms 2.51% dl_open_worker 0 0% 71.13% 12ms 2.51% dlopen_doit 0 0% 71.13% 12ms 2.51% dlopen_implementation (inline) 0 0% 71.13% 12ms 2.51% mca_base_framework_components_register 1ms 0.21% 71.34% 11ms 2.30% AbstractCardiacCell::ComputeExceptVoltage 3ms 0.63% 71.97% 11ms 2.30% CellLuoRudy1991FromCellML::GetIIonic 0 0% 71.97% 11ms 2.30% VecAXPY_Seq 0 0% 71.97% 11ms 2.30% VecAYPX 11ms 2.30% 74.27% 11ms 2.30% VecAYPX_Seq 11ms 2.30% 76.57% 11ms 2.30% daxpy_ 0 0% 76.57% 11ms 2.30% mca_base_component_find 1ms 0.21% 76.78% 11ms 2.30% mca_base_component_repository_open 0 0% 76.78% 10ms 2.09% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 76.78% 10ms 2.09% VecDuplicate 0 0% 76.78% 10ms 2.09% _dl_init 0 0% 76.78% 10ms 2.09% call_init (inline) 1ms 0.21% 76.99% 9ms 1.88% VecDuplicate_Seq 0 0% 76.99% 9ms 1.88% dl_open_worker_begin 1ms 0.21% 77.20% 8ms 1.67% EulerIvpOdeSolver::CalculateNextYValue 0 0% 77.20% 8ms 1.67% VecDestroy 8ms 1.67% 78.87% 8ms 1.67% __memcpy_avx_unaligned_erms 4ms 0.84% 79.71% 7ms 1.46% CellLuoRudy1991FromCellML::EvaluateYDerivatives 2ms 0.42% 80.13% 7ms 1.46% PetscMallocA 0 0% 80.13% 7ms 1.46% PetscMemcpy (inline) 0 0% 80.13% 7ms 1.46% _dl_lookup_symbol_x 0 0% 80.13% 7ms 1.46% _dl_start_user 0 0% 80.13% 6ms 1.26% PetscHeaderDestroy_Private 0 0% 80.13% 6ms 1.26% VecCreate 1ms 0.21% 80.33% 6ms 1.26% __pow 0 0% 80.33% 6ms 1.26% _dl_map_object 0 0% 80.33% 6ms 1.26% _dl_map_object_from_fd 0 0% 80.33% 6ms 1.26% opal_hwloc_base_get_topology 0 0% 80.33% 6ms 1.26% orte_ess_base_proc_binding 0 0% 80.33% 6ms 1.26% std::pow (inline) 0 0% 80.33% 5ms 1.05% PetscMallocAlign 0 0% 80.33% 5ms 1.05% VecCopy 0 0% 80.33% 5ms 1.05% VecCopy_Seq (partial-inline) 1ms 0.21% 80.54% 5ms 1.05% __GI___exp 5ms 1.05% 81.59% 5ms 1.05% __GI___libc_read 0 0% 81.59% 5ms 1.05% __ieee754_pow_fma 5ms 1.05% 82.64% 5ms 1.05% __strcmp_avx2 0 0% 82.64% 5ms 1.05% _dl_fixup 0 0% 82.64% 5ms 1.05% _dl_runtime_resolve_xsavec 4ms 0.84% 83.47% 5ms 1.05% do_lookup_x 5ms 1.05% 84.52% 5ms 1.05% exp_inline (inline) 0 0% 84.52% 4ms 0.84% AbstractCardiacProblem::Initialise 1ms 0.21% 84.73% 4ms 0.84% BidomainSolver::SetupLinearSystem 0 0% 84.73% 4ms 0.84% CxxTest::RealWorldDescription::tearDown 0 0% 84.73% 4ms 0.84% PetscFinalize 0 0% 84.73% 4ms 0.84% PetscSetup::tearDownWorld 0 0% 84.73% 4ms 0.84% PetscSetupUtils::CommonFinalize 1ms 0.21% 84.94% 4ms 0.84% __GI___libc_free 0 0% 84.94% 4ms 0.84% __GI___libc_malloc 0 0% 84.94% 4ms 0.84% __dlclose 4ms 0.84% 85.77% 4ms 0.84% __ieee754_exp_fma 0 0% 85.77% 4ms 0.84% __posix_memalign 0 0% 85.77% 4ms 0.84% _dl_close 1ms 0.21% 85.98% 4ms 0.84% _dl_close_worker (inline) 1ms 0.21% 86.19% 4ms 0.84% _int_malloc 0 0% 86.19% 4ms 0.84% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 86.19% 4ms 0.84% boost::serialization::singleton::get_instance 1ms 0.21% 86.40% 4ms 0.84% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 86.40% 4ms 0.84% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 86.40% 4ms 0.84% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 86.40% 4ms 0.84% mca_base_component_repository_release 0 0% 86.40% 4ms 0.84% ompi_mpi_finalize 0 0% 86.40% 3ms 0.63% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 86.40% 3ms 0.63% KSPConvergedDefault 0 0% 86.40% 3ms 0.63% PetscLogObjDestroyDefault 3ms 0.63% 87.03% 3ms 0.63% PetscOptHash (inline) 0 0% 87.03% 3ms 0.63% PetscOptionsFindPair 0 0% 87.03% 3ms 0.63% VecSetType 0 0% 87.03% 3ms 0.63% XOpenDisplay 0 0% 87.03% 3ms 0.63% [hwloc_gl.so] 0 0% 87.03% 3ms 0.63% [libxcb.so.1.1.0] 0 0% 87.03% 3ms 0.63% _XConnectXCB 0 0% 87.03% 3ms 0.63% __GI_exit 0 0% 87.03% 3ms 0.63% __cxa_finalize 0 0% 87.03% 3ms 0.63% __run_exit_handlers 0 0% 87.03% 3ms 0.63% _dl_call_fini 0 0% 87.03% 3ms 0.63% _dl_fini 0 0% 87.03% 3ms 0.63% _dl_open_relocate_one_object (inline) 0 0% 87.03% 3ms 0.63% _dl_relocate_object 2ms 0.42% 87.45% 3ms 0.63% _int_free 0 0% 87.45% 3ms 0.63% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.45% 3ms 0.63% kh_get_HO (inline) 3ms 0.63% 88.08% 3ms 0.63% malloc_consolidate 0 0% 88.08% 3ms 0.63% mca_base_components_close 0 0% 88.08% 3ms 0.63% mca_base_framework_close 0 0% 88.08% 3ms 0.63% mca_base_framework_components_open 0 0% 88.08% 3ms 0.63% mca_topo_base_dist_graph_neighbors_count 0 0% 88.08% 3ms 0.63% xcb_connect_to_display_with_auth_info