File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 119654ms, 91.54% of 130711ms total Dropped 1143 nodes (cum <= 653.55ms) flat flat% sum% cum cum% 0 0% 0% 130699ms 100% __libc_start_call_main 0 0% 0% 130699ms 100% __libc_start_main_impl 0 0% 0% 130699ms 100% _start 0 0% 0% 130696ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 130696ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 130696ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 130696ms 100% main 0 0% 0% 130655ms 100% AbstractConvergenceTester::Converge 0 0% 0% 130655ms 100% CxxTest::RealTestDescription::run 0 0% 0% 130655ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 130655ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 130655ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 130655ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0031% 0.0031% 129458ms 99.04% AbstractCardiacProblem::Solve 9ms 0.0069% 0.0099% 128653ms 98.43% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0031% 0.013% 71626ms 54.80% LinearSystem::Solve 6ms 0.0046% 0.018% 71061ms 54.36% KSPSolve 11ms 0.0084% 0.026% 71055ms 54.36% KSPSolve_Private 11ms 0.0084% 0.034% 70687ms 54.08% KSPSolve_SYMMLQ 482ms 0.37% 0.4% 47332ms 36.21% AbstractCardiacTissue::SolveCellSystems 4ms 0.0031% 0.41% 39748ms 30.41% PCApply 10ms 0.0077% 0.41% 39728ms 30.39% PCApply_BJacobi_Singleblock 1ms 0.00077% 0.41% 37360ms 28.58% KSPSolve_PREONLY (partial-inline) 1103ms 0.84% 1.26% 36931ms 28.25% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 6ms 0.0046% 1.26% 36387ms 27.84% PCApply_ICC 6ms 0.0046% 1.27% 36381ms 27.83% MatSolve 35978ms 27.52% 28.79% 36375ms 27.83% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0015% 28.79% 33956ms 25.98% KSP_PCApply.lto_priv.18 7842ms 6.00% 34.79% 32483ms 24.85% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.0046% 34.80% 25696ms 19.66% MatMult 250ms 0.19% 34.99% 25690ms 19.65% MatMult_SeqAIJ (partial-inline) 25169ms 19.26% 54.24% 25689ms 19.65% MatMult_SeqAIJ_Inode (inline) 2303ms 1.76% 56.01% 16674ms 12.76% CardiacNewtonSolver::Solve 5480ms 4.19% 60.20% 9839ms 7.53% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1467ms 1.12% 61.32% 9501ms 7.27% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 200ms 0.15% 61.47% 8911ms 6.82% AbstractCardiacTissue::UpdateCaches (inline) 1185ms 0.91% 62.38% 8535ms 6.53% BidomainSolver::SetupLinearSystem 1726ms 1.32% 63.70% 8350ms 6.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 7720ms 5.91% 69.61% 7720ms 5.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 69.61% 7397ms 5.66% KSP_PCApply (partial-inline) 4ms 0.0031% 69.61% 6959ms 5.32% KSPConvergedDefault 4066ms 3.11% 72.72% 4159ms 3.18% __ieee754_log_fma 0 0% 72.72% 4082ms 3.12% boost::numeric::ublas::norm_inf (inline) 2836ms 2.17% 74.89% 4082ms 3.12% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.89% 4082ms 3.12% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.89% 4082ms 3.12% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3418ms 2.61% 77.51% 3418ms 2.61% ddot_ 2038ms 1.56% 79.07% 3157ms 2.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 30ms 0.023% 79.09% 3121ms 2.39% std::pow (inline) 442ms 0.34% 79.43% 3067ms 2.35% __pow 11ms 0.0084% 79.43% 2942ms 2.25% MatNullSpaceRemove 2926ms 2.24% 81.67% 2926ms 2.24% __memcpy_avx_unaligned_erms 0 0% 81.67% 2891ms 2.21% PetscMemcpy (inline) 6ms 0.0046% 81.68% 2837ms 2.17% VecDot 1ms 0.00077% 81.68% 2831ms 2.17% VecDot_Seq 4ms 0.0031% 81.68% 2830ms 2.17% VecXDot_Seq_Private.constprop.0 336ms 0.26% 81.94% 2594ms 1.98% __ieee754_pow_fma 20ms 0.015% 81.95% 2529ms 1.93% VecCopy 2ms 0.0015% 81.96% 2507ms 1.92% VecCopy_Seq (partial-inline) 8ms 0.0061% 81.96% 2399ms 1.84% VecAXPY 6ms 0.0046% 81.97% 2391ms 1.83% VecAXPY_Seq 2369ms 1.81% 83.78% 2369ms 1.81% daxpy_ 1ms 0.00077% 83.78% 1987ms 1.52% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00077% 83.78% 1898ms 1.45% VecMDot 8ms 0.0061% 83.79% 1897ms 1.45% VecMXDot_Private 1877ms 1.44% 85.22% 1883ms 1.44% VecMDot_Seq 34ms 0.026% 85.25% 1658ms 1.27% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1528ms 1.17% 86.42% 1575ms 1.20% exp_inline (inline) 0 0% 86.42% 1381ms 1.06% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.42% 1238ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.42% 1238ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.42% 1238ms 0.95% boost_numeric_ublas_abs (inline) 1238ms 0.95% 87.36% 1238ms 0.95% std::abs (inline) 6ms 0.0046% 87.37% 1069ms 0.82% boost::numeric::ublas::matrix_assign (inline) 719ms 0.55% 87.92% 1063ms 0.81% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 216ms 0.17% 88.08% 1056ms 0.81% boost::numeric::ublas::indexing_matrix_assign 4ms 0.0031% 88.09% 1033ms 0.79% VecMAXPY 1026ms 0.78% 88.87% 1029ms 0.79% VecMAXPY_Seq 0 0% 88.87% 1020ms 0.78% CuboidMeshConstructor::Construct 0 0% 88.87% 1019ms 0.78% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00077% 88.87% 1019ms 0.78% DistributedTetrahedralMesh::ConstructCuboid 982ms 0.75% 89.62% 982ms 0.75% [libchaste_heart.so] 2ms 0.0015% 89.63% 916ms 0.7% VecNorm 2ms 0.0015% 89.63% 909ms 0.7% VecNorm_Seq 1ms 0.00077% 89.63% 899ms 0.69% Element::Element 8ms 0.0061% 89.63% 884ms 0.68% AbstractTetrahedralElement::CalculateJacobian 6ms 0.0046% 89.64% 867ms 0.66% BidomainAssembler::ComputeMatrixTerm 2ms 0.0015% 89.64% 837ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 8ms 0.0061% 89.65% 828ms 0.63% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00077% 89.65% 816ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 257ms 0.2% 89.84% 815ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 781ms 0.6% 90.44% 781ms 0.6% __memset_avx2_unaligned_erms 7ms 0.0054% 90.45% 778ms 0.6% VecScale 3ms 0.0023% 90.45% 771ms 0.59% VecScale_Seq 0 0% 90.45% 770ms 0.59% PetscMemzero (inline) 767ms 0.59% 91.04% 767ms 0.59% dscal_ 1ms 0.00077% 91.04% 737ms 0.56% BidomainProblem::WriteOneStep 2ms 0.0015% 91.04% 686ms 0.52% VecDuplicate 657ms 0.5% 91.54% 657ms 0.5% log_inline (inline)