File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12688ms, 85.44% of 14851ms total Dropped 718 nodes (cum <= 74.25ms) flat flat% sum% cum cum% 0 0% 0% 14844ms 100% __libc_start_call_main 0 0% 0% 14844ms 100% __libc_start_main_impl 0 0% 0% 14844ms 100% _start 0 0% 0% 14841ms 99.93% main 0 0% 0% 14840ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14840ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14840ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14801ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14801ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14801ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14778ms 99.51% AbstractCardiacProblem::Solve 2ms 0.013% 0.034% 11437ms 77.01% AbstractDynamicLinearPdeSolver::Solve 74ms 0.5% 0.53% 9034ms 60.83% AbstractCardiacTissue::SolveCellSystems 105ms 0.71% 1.24% 5531ms 37.24% AbstractCardiacCell::ComputeExceptVoltage 129ms 0.87% 2.11% 4849ms 32.65% AbstractOneStepIvpOdeSolver::InternalSolve 166ms 1.12% 3.23% 4110ms 27.67% EulerIvpOdeSolver::CalculateNextYValue 934ms 6.29% 9.51% 3913ms 26.35% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1721ms 11.59% 21.10% 3447ms 23.21% __GI___exp 0 0% 21.10% 3281ms 22.09% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.11% 3155ms 21.24% H5Dwrite 3ms 0.02% 21.13% 3153ms 21.23% Hdf5DataWriter::PutVector 6ms 0.04% 21.17% 3135ms 21.11% H5D__write 120ms 0.81% 21.98% 2859ms 19.25% AbstractCardiacTissue::UpdateCaches (inline) 786ms 5.29% 27.27% 2652ms 17.86% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.27% 1893ms 12.75% H5D__chunk_collective_write 19ms 0.13% 27.40% 1893ms 12.75% H5F_set_coll_metadata_reads 21ms 0.14% 27.54% 1674ms 11.27% H5FD_s3comms_uriencode 1346ms 9.06% 36.60% 1637ms 11.02% __ieee754_exp_fma 1ms 0.0067% 36.61% 1595ms 10.74% LinearSystem::Solve 0 0% 36.61% 1478ms 9.95% KSPSolve 5ms 0.034% 36.64% 1478ms 9.95% KSPSolve_Private 2ms 0.013% 36.66% 1465ms 9.86% KSPSolve_CG 43ms 0.29% 36.95% 1357ms 9.14% 1ms 0.0067% 36.95% 1349ms 9.08% H5F_block_write 0 0% 36.95% 1348ms 9.08% H5FD_write 0 0% 36.95% 1348ms 9.08% H5F__accum_write 0 0% 36.95% 1348ms 9.08% H5PB_write 3ms 0.02% 36.97% 1262ms 8.50% H5D__mpio_select_write 17ms 0.11% 37.09% 1146ms 7.72% H5D__chunk_cacheable 2ms 0.013% 37.10% 1132ms 7.62% PMPI_File_write_at_all 1112ms 7.49% 44.59% 1114ms 7.50% __GI_pwritev64 3ms 0.02% 44.61% 1011ms 6.81% std::pow (inline) 99ms 0.67% 45.28% 1008ms 6.79% __pow 298ms 2.01% 47.28% 969ms 6.52% H5S_select_iterate 84ms 0.57% 47.85% 908ms 6.11% __ieee754_pow_fma 1ms 0.0067% 47.86% 829ms 5.58% PCApply 0 0% 47.86% 827ms 5.57% PCApply_BJacobi_Singleblock 1ms 0.0067% 47.86% 797ms 5.37% KSPSolve_PREONLY 3ms 0.02% 47.88% 792ms 5.33% MatSolve 0 0% 47.88% 792ms 5.33% PCApply_ICC 782ms 5.27% 53.15% 789ms 5.31% MatSolve_SeqSBAIJ_1_NaturalOrdering 345ms 2.32% 55.47% 787ms 5.30% MonodomainSolver::SetupLinearSystem 91ms 0.61% 56.08% 682ms 4.59% H5D__chunk_set_sizes 0 0% 56.08% 616ms 4.15% KSP_PCApply.lto_priv.7 3ms 0.02% 56.10% 615ms 4.14% MatMult 611ms 4.11% 60.22% 612ms 4.12% MatMult_SeqAIJ 438ms 2.95% 63.17% 438ms 2.95% log_inline (inline) 58ms 0.39% 63.56% 402ms 2.71% H5S_mpio_space_type 191ms 1.29% 64.84% 387ms 2.61% CellLuoRudy1991FromCellML::VerifyStateVariables 329ms 2.22% 67.06% 339ms 2.28% exp_inline (inline) 1ms 0.0067% 67.07% 276ms 1.86% KSPConvergedDefault 127ms 0.86% 67.92% 276ms 1.86% TimeStepper::TimeStepper 256ms 1.72% 69.65% 256ms 1.72% [libchaste_heart.so] 190ms 1.28% 70.92% 248ms 1.67% top12 (inline) 50ms 0.34% 71.26% 217ms 1.46% AbstractCardiacCell::SetVoltage (partial-inline) 0 0% 71.26% 217ms 1.46% KSP_PCApply 10ms 0.067% 71.33% 208ms 1.40% H5VM_chunk_index 11ms 0.074% 71.40% 186ms 1.25% ompi_datatype_destroy 30ms 0.2% 71.60% 182ms 1.23% __GI___libc_free 41ms 0.28% 71.88% 180ms 1.21% __GI___libc_malloc 2ms 0.013% 71.89% 177ms 1.19% MPI_Type_free 138ms 0.93% 72.82% 175ms 1.18% _int_malloc 173ms 1.16% 73.99% 173ms 1.16% __ieee754_log_fma 158ms 1.06% 75.05% 158ms 1.06% asuint64 (inline) 157ms 1.06% 76.11% 157ms 1.06% ddot_ 152ms 1.02% 77.13% 152ms 1.02% TimeStepper::CalculateNextTime 58ms 0.39% 77.52% 152ms 1.02% _int_free 41ms 0.28% 77.80% 152ms 1.02% ompi_datatype_release_args 5ms 0.034% 77.83% 152ms 1.02% ompi_info_register_framework_params 106ms 0.71% 78.55% 146ms 0.98% AbstractOneStepIvpOdeSolver::Solve 0 0% 78.55% 145ms 0.98% PMPI_File_set_view 112ms 0.75% 79.30% 142ms 0.96% AbstractParameterisedSystem::SetAnyVariable 110ms 0.74% 80.04% 132ms 0.89% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 131ms 0.88% 80.92% 131ms 0.88% __memcpy_avx_unaligned_erms 9ms 0.061% 80.98% 130ms 0.88% ompi_datatype_create 68ms 0.46% 81.44% 129ms 0.87% H5S_hyper_add_span_element 26ms 0.18% 81.62% 129ms 0.87% H5S_set_version 0 0% 81.62% 128ms 0.86% Hdf5DataWriter::PutUnlimitedVariable 63ms 0.42% 82.04% 124ms 0.83% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 110ms 0.74% 82.78% 110ms 0.74% H5VM_chunk_index_scaled 4ms 0.027% 82.81% 108ms 0.73% VecNorm 35ms 0.24% 83.04% 103ms 0.69% H5VM_array_calc 78ms 0.53% 83.57% 101ms 0.68% AbstractParameterisedSystem::GetAnyVariable 0 0% 83.57% 97ms 0.65% std::vector::_M_assign_aux (inline) 0 0% 83.57% 97ms 0.65% std::vector::assign (inline) 1ms 0.0067% 83.58% 94ms 0.63% VecNorm_Seq 2ms 0.013% 83.59% 92ms 0.62% VecDuplicate 1ms 0.0067% 83.60% 92ms 0.62% VecTDot 91ms 0.61% 84.21% 91ms 0.61% H5VM_array_offset_pre 0 0% 84.21% 91ms 0.61% VecTDot_Seq 0 0% 84.21% 91ms 0.61% VecXDot_Seq_Private.constprop.0 0 0% 84.21% 90ms 0.61% VecDuplicate_MPI 90ms 0.61% 84.82% 90ms 0.61% [libm.so.6] 55ms 0.37% 85.19% 88ms 0.59% TimeStepper::AdvanceOneTimeStep 11ms 0.074% 85.26% 86ms 0.58% std::__copy_move::__copy_m (inline) 0 0% 85.26% 86ms 0.58% std::__copy_move_a (inline) 0 0% 85.26% 86ms 0.58% std::__copy_move_a1 (inline) 0 0% 85.26% 86ms 0.58% std::__copy_move_a2 (inline) 0 0% 85.26% 86ms 0.58% std::copy (inline) 3ms 0.02% 85.28% 85ms 0.57% PMPI_Type_create_resized 1ms 0.0067% 85.29% 85ms 0.57% ompi_datatype_duplicate 22ms 0.15% 85.44% 77ms 0.52% AbstractCardiacCell::GetVoltage (partial-inline)