File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 438ms, 89.57% of 489ms total Dropped 197 nodes (cum <= 2.44ms) flat flat% sum% cum cum% 0 0% 0% 478ms 97.75% __libc_start_call_main 0 0% 0% 478ms 97.75% __libc_start_main_impl 0 0% 0% 478ms 97.75% _start 0 0% 0% 474ms 96.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 474ms 96.93% CxxTest::TestRunner::runAllTests 0 0% 0% 474ms 96.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 474ms 96.93% main 0 0% 0% 432ms 88.34% CxxTest::RealTestDescription::run 0 0% 0% 432ms 88.34% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 432ms 88.34% CxxTest::TestRunner::runTest (inline) 0 0% 0% 432ms 88.34% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 432ms 88.34% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 427ms 87.32% AbstractCardiacProblem::Solve 1ms 0.2% 0.2% 425ms 86.91% AbstractDynamicLinearPdeSolver::Solve 0 0% 0.2% 382ms 78.12% LinearSystem::Solve 0 0% 0.2% 381ms 77.91% KSPSolve 0 0% 0.2% 381ms 77.91% KSPSolve_Private 0 0% 0.2% 380ms 77.71% KSPSolve_CG 0 0% 0.2% 226ms 46.22% KSP_PCApply.lto_priv.7 0 0% 0.2% 210ms 42.94% PCApply 0 0% 0.2% 210ms 42.94% PCApply_BJacobi_Singleblock 0 0% 0.2% 186ms 38.04% KSPSolve_PREONLY (partial-inline) 1ms 0.2% 0.41% 176ms 35.99% MatSolve 0 0% 0.41% 176ms 35.99% PCApply_ICC 173ms 35.38% 35.79% 175ms 35.79% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.79% 92ms 18.81% MatMult 1ms 0.2% 35.99% 92ms 18.81% MatMult_SeqAIJ (partial-inline) 91ms 18.61% 54.60% 92ms 18.81% MatMult_SeqAIJ_Inode (inline) 41ms 8.38% 62.99% 41ms 8.38% ddot_ 0 0% 62.99% 38ms 7.77% CxxTest::RealWorldDescription::setUp 0 0% 62.99% 38ms 7.77% PetscInitialize 0 0% 62.99% 38ms 7.77% PetscSetup::setUpWorld 0 0% 62.99% 38ms 7.77% PetscSetupUtils::CommonSetup 0 0% 62.99% 38ms 7.77% PetscSetupUtils::InitialisePetsc 1ms 0.2% 63.19% 37ms 7.57% MatNullSpaceRemove 0 0% 63.19% 37ms 7.57% PMPI_Init_thread 0 0% 63.19% 37ms 7.57% ompi_mpi_init 0 0% 63.19% 36ms 7.36% AbstractCardiacTissue::SolveCellSystems 3ms 0.61% 63.80% 31ms 6.34% 0 0% 63.80% 25ms 5.11% VecTDot 0 0% 63.80% 25ms 5.11% VecTDot_Seq 0 0% 63.80% 25ms 5.11% VecXDot_Seq_Private.constprop.0 0 0% 63.80% 22ms 4.50% orte_init 0 0% 63.80% 19ms 3.89% VecMDot 1ms 0.2% 64.01% 19ms 3.89% VecMXDot_Private 0 0% 64.01% 19ms 3.89% opal_stackframe_output 1ms 0.2% 64.21% 18ms 3.68% AbstractCardiacCell::ComputeExceptVoltage 18ms 3.68% 67.89% 18ms 3.68% VecMDot_Seq 0 0% 67.89% 18ms 3.68% __GI__dl_catch_exception 0 0% 67.89% 18ms 3.68% _dl_catch_error 0 0% 67.89% 18ms 3.68% _dlerror_run 0 0% 67.89% 18ms 3.68% mca_base_framework_open 0 0% 67.89% 17ms 3.48% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.2% 68.10% 17ms 3.48% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.2% 68.30% 17ms 3.48% VecMAXPY 0 0% 68.30% 17ms 3.48% VecNorm 0 0% 68.30% 17ms 3.48% mca_base_framework_components_register 0 0% 68.30% 17ms 3.48% mca_base_framework_register 2ms 0.41% 68.71% 16ms 3.27% CellLuoRudy1991FromCellML::GetIIonic 16ms 3.27% 71.98% 16ms 3.27% VecMAXPY_Seq 0 0% 71.98% 16ms 3.27% VecNorm_Seq 0 0% 71.98% 16ms 3.27% _dl_init 0 0% 71.98% 16ms 3.27% call_init (inline) 0 0% 71.98% 16ms 3.27% mca_base_component_find 0 0% 71.98% 16ms 3.27% mca_base_component_repository_open 7ms 1.43% 73.42% 15ms 3.07% __GI___exp 0 0% 73.42% 15ms 3.07% ___dlopen 0 0% 73.42% 15ms 3.07% _dl_open 0 0% 73.42% 15ms 3.07% dl_open_worker 0 0% 73.42% 15ms 3.07% dlopen_doit 0 0% 73.42% 15ms 3.07% dlopen_implementation (inline) 5ms 1.02% 74.44% 14ms 2.86% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 74.44% 14ms 2.86% EulerIvpOdeSolver::CalculateNextYValue 1ms 0.2% 74.64% 14ms 2.86% VecAYPX 0 0% 74.64% 13ms 2.66% KSP_PCApply (partial-inline) 13ms 2.66% 77.30% 13ms 2.66% VecAYPX_Seq 0 0% 77.30% 13ms 2.66% VecDuplicate 0 0% 77.30% 13ms 2.66% hwloc_topology_load 0 0% 77.30% 12ms 2.45% VecDuplicate_Seq 0 0% 77.30% 12ms 2.45% hwloc_linux_get_tid_last_cpu_location 0 0% 77.30% 11ms 2.25% _dl_lookup_symbol_x 0 0% 77.30% 9ms 1.84% PetscMallocA 1ms 0.2% 77.51% 9ms 1.84% PetscMallocAlign (partial-inline) 0 0% 77.51% 9ms 1.84% _dl_start_user 5ms 1.02% 78.53% 9ms 1.84% do_lookup_x 0 0% 78.53% 9ms 1.84% mca_base_framework_components_open 6ms 1.23% 79.75% 8ms 1.64% __ieee754_exp_fma 2ms 0.41% 80.16% 8ms 1.64% _dl_runtime_resolve_xsavec 0 0% 80.16% 8ms 1.64% dl_open_worker_begin 0 0% 80.16% 8ms 1.64% mca_topo_base_dist_graph_neighbors_count 0 0% 80.16% 6ms 1.23% BidomainSolver::SetupLinearSystem 0 0% 80.16% 6ms 1.23% VecCreate 1ms 0.2% 80.37% 6ms 1.23% __ieee754_pow_fma 0 0% 80.37% 6ms 1.23% __pow 1ms 0.2% 80.57% 6ms 1.23% _dl_fixup 0 0% 80.57% 6ms 1.23% _dl_open_relocate_one_object (inline) 0 0% 80.57% 6ms 1.23% _dl_relocate_object 2ms 0.41% 80.98% 6ms 1.23% boost::serialization::singleton::get_instance 0 0% 80.98% 6ms 1.23% elf_dynamic_do_Rela (inline) 0 0% 80.98% 6ms 1.23% elf_machine_rela (inline) 0 0% 80.98% 6ms 1.23% resolve_map (inline) 0 0% 80.98% 6ms 1.23% std::pow (inline) 0 0% 80.98% 5ms 1.02% KSPConvergedDefault 0 0% 80.98% 5ms 1.02% PetscMemzero (inline) 0 0% 80.98% 5ms 1.02% VecAXPY 0 0% 80.98% 5ms 1.02% VecAXPY_Seq 1ms 0.2% 81.19% 5ms 1.02% VecCreate_Seq 0 0% 81.19% 5ms 1.02% VecSetType 5ms 1.02% 82.21% 5ms 1.02% __GI___clock_nanosleep 0 0% 82.21% 5ms 1.02% __GI___nanosleep 5ms 1.02% 83.23% 5ms 1.02% __memcpy_avx_unaligned_erms 5ms 1.02% 84.25% 5ms 1.02% __memset_avx2_unaligned_erms 0 0% 84.25% 5ms 1.02% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 5ms 1.02% 85.28% 5ms 1.02% daxpy_ 0 0% 85.28% 5ms 1.02% usleep 0 0% 85.28% 4ms 0.82% AbstractCardiacProblem::Initialise 0 0% 85.28% 4ms 0.82% CxxTest::RealWorldDescription::tearDown 0 0% 85.28% 4ms 0.82% PetscFinalize 0 0% 85.28% 4ms 0.82% PetscMemcpy (inline) 0 0% 85.28% 4ms 0.82% PetscSetup::tearDownWorld 0 0% 85.28% 4ms 0.82% PetscSetupUtils::CommonFinalize 4ms 0.82% 86.09% 4ms 0.82% __GI___fstatat64 0 0% 86.09% 4ms 0.82% __GI___libc_malloc 0 0% 86.09% 4ms 0.82% __GI_exit 0 0% 86.09% 4ms 0.82% __run_exit_handlers 2ms 0.41% 86.50% 4ms 0.82% _int_malloc 0 0% 86.50% 4ms 0.82% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 3ms 0.61% 87.12% 4ms 0.82% check_match 0 0% 87.12% 4ms 0.82% ompi_mpi_finalize 0 0% 87.12% 4ms 0.82% opal_hwloc_base_get_topology 0 0% 87.12% 4ms 0.82% orte_ess_base_proc_binding 0 0% 87.12% 3ms 0.61% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 87.12% 3ms 0.61% XOpenDisplay 0 0% 87.12% 3ms 0.61% [hwloc_gl.so] 0 0% 87.12% 3ms 0.61% [libxcb.so.1.1.0] 0 0% 87.12% 3ms 0.61% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 87.12% 3ms 0.61% _XConnectXCB 3ms 0.61% 87.73% 3ms 0.61% __GI___libc_read 0 0% 87.73% 3ms 0.61% __cxa_finalize 0 0% 87.73% 3ms 0.61% __dlclose 3ms 0.61% 88.34% 3ms 0.61% __memchr_avx2 0 0% 88.34% 3ms 0.61% _dl_call_fini 0 0% 88.34% 3ms 0.61% _dl_close 1ms 0.2% 88.55% 3ms 0.61% _dl_close_worker (inline) 0 0% 88.55% 3ms 0.61% _dl_fini 1ms 0.2% 88.75% 3ms 0.61% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.2% 88.96% 3ms 0.61% boost::serialization::void_cast_detail::void_caster::recursive_register 3ms 0.61% 89.57% 3ms 0.61% log_inline (inline) 0 0% 89.57% 3ms 0.61% mca_base_component_repository_release 0 0% 89.57% 3ms 0.61% mca_base_components_close 0 0% 89.57% 3ms 0.61% mca_base_framework_close 0 0% 89.57% 3ms 0.61% xcb_connect_to_display_with_auth_info