File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 383ms, 86.46% of 443ms total Dropped 204 nodes (cum <= 2.21ms) flat flat% sum% cum cum% 0 0% 0% 435ms 98.19% __libc_start_call_main 0 0% 0% 435ms 98.19% __libc_start_main_impl 0 0% 0% 435ms 98.19% _start 0 0% 0% 432ms 97.52% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 432ms 97.52% CxxTest::TestRunner::runAllTests 0 0% 0% 432ms 97.52% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 432ms 97.52% main 0 0% 0% 396ms 89.39% CxxTest::RealTestDescription::run 0 0% 0% 396ms 89.39% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 396ms 89.39% CxxTest::TestRunner::runTest (inline) 0 0% 0% 396ms 89.39% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 396ms 89.39% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 391ms 88.26% AbstractCardiacProblem::Solve 0 0% 0% 389ms 87.81% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 358ms 80.81% KSPSolve 1ms 0.23% 0.23% 358ms 80.81% KSPSolve_Private 0 0% 0.23% 358ms 80.81% LinearSystem::Solve 0 0% 0.23% 356ms 80.36% KSPSolve_CG 0 0% 0.23% 205ms 46.28% KSP_PCApply.lto_priv.7 0 0% 0.23% 201ms 45.37% PCApply 2ms 0.45% 0.68% 201ms 45.37% PCApply_BJacobi_Singleblock 1ms 0.23% 0.9% 168ms 37.92% KSPSolve_PREONLY (partial-inline) 1ms 0.23% 1.13% 153ms 34.54% MatSolve 0 0% 1.13% 153ms 34.54% PCApply_ICC 150ms 33.86% 34.99% 152ms 34.31% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.23% 35.21% 70ms 15.80% MatMult 3ms 0.68% 35.89% 69ms 15.58% MatMult_SeqAIJ (partial-inline) 66ms 14.90% 50.79% 69ms 15.58% MatMult_SeqAIJ_Inode (inline) 55ms 12.42% 63.21% 55ms 12.42% ddot_ 0 0% 63.21% 32ms 7.22% CxxTest::RealWorldDescription::setUp 0 0% 63.21% 32ms 7.22% PMPI_Init_thread 0 0% 63.21% 32ms 7.22% PetscInitialize 0 0% 63.21% 32ms 7.22% PetscSetup::setUpWorld 0 0% 63.21% 32ms 7.22% PetscSetupUtils::CommonSetup 0 0% 63.21% 32ms 7.22% PetscSetupUtils::InitialisePetsc 0 0% 63.21% 32ms 7.22% VecTDot 0 0% 63.21% 32ms 7.22% VecTDot_Seq 0 0% 63.21% 32ms 7.22% VecXDot_Seq_Private.constprop.0 0 0% 63.21% 32ms 7.22% ompi_mpi_init 1ms 0.23% 63.43% 30ms 6.77% 0 0% 63.43% 27ms 6.09% AbstractCardiacTissue::SolveCellSystems 0 0% 63.43% 27ms 6.09% MatNullSpaceRemove 0 0% 63.43% 24ms 5.42% VecNorm 1ms 0.23% 63.66% 24ms 5.42% VecNorm_Seq 0 0% 63.66% 22ms 4.97% orte_init 2ms 0.45% 64.11% 19ms 4.29% AbstractCardiacCell::ComputeExceptVoltage 0 0% 64.11% 19ms 4.29% VecMDot 18ms 4.06% 68.17% 19ms 4.29% VecMDot_Seq 0 0% 68.17% 19ms 4.29% VecMXDot_Private 0 0% 68.17% 17ms 3.84% KSP_PCApply (partial-inline) 0 0% 68.17% 15ms 3.39% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 68.17% 15ms 3.39% VecAYPX 15ms 3.39% 71.56% 15ms 3.39% VecAYPX_Seq 0 0% 71.56% 14ms 3.16% hwloc_topology_load 0 0% 71.56% 13ms 2.93% EulerIvpOdeSolver::CalculateNextYValue 5ms 1.13% 72.69% 12ms 2.71% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 72.69% 12ms 2.71% VecDuplicate 1ms 0.23% 72.91% 12ms 2.71% hwloc_linux_get_tid_last_cpu_location 1ms 0.23% 73.14% 11ms 2.48% VecDuplicate_Seq 0 0% 73.14% 11ms 2.48% __GI__dl_catch_exception 0 0% 73.14% 11ms 2.48% _dl_catch_error 0 0% 73.14% 11ms 2.48% _dlerror_run 0 0% 73.14% 11ms 2.48% mca_base_framework_open 0 0% 73.14% 10ms 2.26% mca_base_framework_register 0 0% 73.14% 9ms 2.03% _dl_init 1ms 0.23% 73.36% 9ms 2.03% call_init (inline) 0 0% 73.36% 9ms 2.03% opal_stackframe_output 0 0% 73.36% 8ms 1.81% VecMAXPY 8ms 1.81% 75.17% 8ms 1.81% VecMAXPY_Seq 4ms 0.9% 76.07% 8ms 1.81% __GI___exp 8ms 1.81% 77.88% 8ms 1.81% __memset_avx2_unaligned_erms 0 0% 77.88% 8ms 1.81% mca_base_framework_components_register 0 0% 77.88% 7ms 1.58% AbstractCardiacTissue::UpdateCaches (inline) 4ms 0.9% 78.78% 7ms 1.58% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.23% 79.01% 7ms 1.58% PetscMallocA 0 0% 79.01% 7ms 1.58% PetscMemzero (inline) 0 0% 79.01% 7ms 1.58% ___dlopen 7ms 1.58% 80.59% 7ms 1.58% __memcpy_avx_unaligned_erms 0 0% 80.59% 7ms 1.58% _dl_open 0 0% 80.59% 7ms 1.58% _dl_start_user 0 0% 80.59% 7ms 1.58% dl_open_worker 0 0% 80.59% 7ms 1.58% dlopen_doit 0 0% 80.59% 7ms 1.58% dlopen_implementation (inline) 0 0% 80.59% 6ms 1.35% PetscMallocAlign (partial-inline) 0 0% 80.59% 6ms 1.35% PetscMemcpy (inline) 0 0% 80.59% 6ms 1.35% VecCreate 0 0% 80.59% 6ms 1.35% opal_hwloc_base_get_topology 0 0% 80.59% 6ms 1.35% orte_ess_base_proc_binding 0 0% 80.59% 5ms 1.13% KSPConvergedDefault 0 0% 80.59% 5ms 1.13% VecAXPY 0 0% 80.59% 5ms 1.13% VecAXPY_Seq 0 0% 80.59% 5ms 1.13% VecCopy 0 0% 80.59% 5ms 1.13% VecCopy_Seq (partial-inline) 0 0% 80.59% 5ms 1.13% VecSetType 2ms 0.45% 81.04% 5ms 1.13% __GI___libc_malloc 0 0% 81.04% 5ms 1.13% _dl_call_fini 1ms 0.23% 81.26% 5ms 1.13% boost::serialization::singleton::get_instance 5ms 1.13% 82.39% 5ms 1.13% daxpy_ 0 0% 82.39% 5ms 1.13% dl_open_worker_begin 0 0% 82.39% 5ms 1.13% mca_base_component_find 0 0% 82.39% 5ms 1.13% mca_base_component_repository_open 0 0% 82.39% 4ms 0.9% AbstractCardiacProblem::Initialise 1ms 0.23% 82.62% 4ms 0.9% BidomainSolver::SetupLinearSystem 0 0% 82.62% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 82.62% 4ms 0.9% PetscFinalize 0 0% 82.62% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 82.62% 4ms 0.9% PetscSetupUtils::CommonFinalize 0 0% 82.62% 4ms 0.9% VecCreate_Seq 2ms 0.45% 83.07% 4ms 0.9% __cxa_finalize 0 0% 83.07% 4ms 0.9% __dlclose 0 0% 83.07% 4ms 0.9% _dl_close 0 0% 83.07% 4ms 0.9% _dl_close_worker (inline) 1ms 0.23% 83.30% 4ms 0.9% _dl_map_object 1ms 0.23% 83.52% 4ms 0.9% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 83.52% 4ms 0.9% mca_base_component_repository_release 0 0% 83.52% 4ms 0.9% mca_base_components_close 0 0% 83.52% 4ms 0.9% mca_base_var_group_register 0 0% 83.52% 4ms 0.9% mca_base_var_register 0 0% 83.52% 4ms 0.9% ompi_mpi_finalize 0 0% 83.52% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 83.52% 3ms 0.68% PetscHeaderDestroy_Private 0 0% 83.52% 3ms 0.68% VecDestroy 0 0% 83.52% 3ms 0.68% VecSet 0 0% 83.52% 3ms 0.68% VecSet_Seq (partial-inline) 0 0% 83.52% 3ms 0.68% XOpenDisplay 0 0% 83.52% 3ms 0.68% [hwloc_gl.so] 1ms 0.23% 83.75% 3ms 0.68% _IO_new_file_fopen 0 0% 83.75% 3ms 0.68% _IO_new_fopen 0 0% 83.75% 3ms 0.68% _XConnectXCB 3ms 0.68% 84.42% 3ms 0.68% __GI___libc_read 0 0% 84.42% 3ms 0.68% __GI_exit 2ms 0.45% 84.88% 3ms 0.68% __GI_getenv 0 0% 84.88% 3ms 0.68% __fopen_internal (inline) 3ms 0.68% 85.55% 3ms 0.68% __ieee754_exp_fma 0 0% 85.55% 3ms 0.68% __run_exit_handlers 0 0% 85.55% 3ms 0.68% _dl_fini 0 0% 85.55% 3ms 0.68% _dl_map_object_deps 2ms 0.45% 86.00% 3ms 0.68% _dl_runtime_resolve_xsavec 2ms 0.45% 86.46% 3ms 0.68% _int_malloc 0 0% 86.46% 3ms 0.68% opal_timer_base_get_freq 0 0% 86.46% 3ms 0.68% openaux 0 0% 86.46% 3ms 0.68% xcb_connect_to_display_with_auth_info