File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12603ms, 84.91% of 14842ms total Dropped 748 nodes (cum <= 74.21ms) flat flat% sum% cum cum% 0 0% 0% 14833ms 99.94% __libc_start_call_main 0 0% 0% 14833ms 99.94% __libc_start_main_impl 0 0% 0% 14833ms 99.94% _start 0 0% 0% 14830ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14830ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14830ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14830ms 99.92% main 0 0% 0% 14793ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14793ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14793ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14768ms 99.50% AbstractCardiacProblem::Solve 3ms 0.02% 0.04% 11463ms 77.23% AbstractDynamicLinearPdeSolver::Solve 50ms 0.34% 0.38% 9163ms 61.74% AbstractCardiacTissue::SolveCellSystems 146ms 0.98% 1.36% 5683ms 38.29% AbstractCardiacCell::ComputeExceptVoltage 185ms 1.25% 2.61% 4856ms 32.72% AbstractOneStepIvpOdeSolver::InternalSolve 157ms 1.06% 3.67% 4082ms 27.50% EulerIvpOdeSolver::CalculateNextYValue 846ms 5.70% 9.37% 3860ms 26.01% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1793ms 12.08% 21.45% 3586ms 24.16% __GI___exp 1ms 0.0067% 21.45% 3238ms 21.82% MonodomainProblem::WriteOneStep 3ms 0.02% 21.47% 3091ms 20.83% Hdf5DataWriter::PutVector 1ms 0.0067% 21.48% 3062ms 20.63% H5Dwrite 6ms 0.04% 21.52% 3030ms 20.42% H5D__write 111ms 0.75% 22.27% 2715ms 18.29% AbstractCardiacTissue::UpdateCaches (inline) 850ms 5.73% 27.99% 2567ms 17.30% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.99% 1819ms 12.26% H5D__chunk_collective_write 17ms 0.11% 28.11% 1819ms 12.26% H5F_set_coll_metadata_reads 1576ms 10.62% 38.73% 1708ms 11.51% __ieee754_exp_fma 17ms 0.11% 38.84% 1587ms 10.69% H5FD_s3comms_uriencode 1ms 0.0067% 38.85% 1550ms 10.44% LinearSystem::Solve 0 0% 38.85% 1426ms 9.61% KSPSolve 0 0% 38.85% 1426ms 9.61% KSPSolve_Private 6ms 0.04% 38.89% 1413ms 9.52% KSPSolve_CG 2ms 0.013% 38.90% 1218ms 8.21% H5F_block_write 1ms 0.0067% 38.91% 1216ms 8.19% H5PB_write 45ms 0.3% 39.21% 1215ms 8.19% 1ms 0.0067% 39.22% 1215ms 8.19% H5F__accum_write 2ms 0.013% 39.23% 1214ms 8.18% H5FD_write 3ms 0.02% 39.25% 1132ms 7.63% H5D__mpio_select_write 4ms 0.027% 39.28% 1102ms 7.42% H5D__chunk_cacheable 2ms 0.013% 39.29% 1026ms 6.91% PMPI_File_write_at_all 1002ms 6.75% 46.05% 1004ms 6.76% __GI_pwritev64 365ms 2.46% 48.50% 953ms 6.42% H5S_select_iterate 6ms 0.04% 48.54% 920ms 6.20% std::pow (inline) 89ms 0.6% 49.14% 914ms 6.16% __pow 104ms 0.7% 49.85% 825ms 5.56% __ieee754_pow_fma 2ms 0.013% 49.86% 737ms 4.97% PCApply 302ms 2.03% 51.89% 728ms 4.90% MonodomainSolver::SetupLinearSystem 0 0% 51.89% 726ms 4.89% PCApply_BJacobi_Singleblock 0 0% 51.89% 689ms 4.64% KSPSolve_PREONLY 3ms 0.02% 51.91% 687ms 4.63% MatSolve 0 0% 51.91% 687ms 4.63% PCApply_ICC 675ms 4.55% 56.46% 684ms 4.61% MatSolve_SeqSBAIJ_1_NaturalOrdering 3ms 0.02% 56.48% 642ms 4.33% MatMult 636ms 4.29% 60.77% 639ms 4.31% MatMult_SeqAIJ 65ms 0.44% 61.20% 609ms 4.10% H5D__chunk_set_sizes 252ms 1.70% 62.90% 589ms 3.97% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 62.90% 538ms 3.62% KSP_PCApply.lto_priv.7 53ms 0.36% 63.26% 457ms 3.08% H5S_mpio_space_type 395ms 2.66% 65.92% 395ms 2.66% log_inline (inline) 290ms 1.95% 67.87% 291ms 1.96% exp_inline (inline) 149ms 1.00% 68.88% 273ms 1.84% TimeStepper::TimeStepper 2ms 0.013% 68.89% 251ms 1.69% KSPConvergedDefault 48ms 0.32% 69.22% 209ms 1.41% __GI___libc_malloc 0 0% 69.22% 201ms 1.35% KSP_PCApply 186ms 1.25% 70.47% 186ms 1.25% std::isinf (inline) 143ms 0.96% 71.43% 184ms 1.24% _int_malloc 159ms 1.07% 72.50% 183ms 1.23% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 95ms 0.64% 73.14% 180ms 1.21% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 18ms 0.12% 73.27% 170ms 1.15% H5VM_chunk_index 28ms 0.19% 73.45% 166ms 1.12% AbstractCardiacCell::SetVoltage (partial-inline) 99ms 0.67% 74.12% 166ms 1.12% top12 (inline) 5ms 0.034% 74.15% 164ms 1.10% MPI_Type_free 6ms 0.04% 74.19% 164ms 1.10% ompi_datatype_destroy 123ms 0.83% 75.02% 163ms 1.10% AbstractOneStepIvpOdeSolver::Solve 163ms 1.10% 76.12% 163ms 1.10% [libchaste_heart.so] 155ms 1.04% 77.17% 155ms 1.04% ddot_ 10ms 0.067% 77.23% 154ms 1.04% ompi_datatype_create 6ms 0.04% 77.27% 147ms 0.99% ompi_info_register_framework_params 1ms 0.0067% 77.28% 146ms 0.98% Hdf5DataWriter::PutUnlimitedVariable 49ms 0.33% 77.61% 146ms 0.98% ompi_datatype_release_args 24ms 0.16% 77.77% 142ms 0.96% __GI___libc_free 19ms 0.13% 77.90% 140ms 0.94% H5S_set_version 139ms 0.94% 78.84% 139ms 0.94% TimeStepper::CalculateNextTime 41ms 0.28% 79.11% 121ms 0.82% H5VM_array_calc 119ms 0.8% 79.92% 119ms 0.8% __memcpy_avx_unaligned_erms 1ms 0.0067% 79.92% 118ms 0.8% PMPI_File_set_view 42ms 0.28% 80.20% 118ms 0.8% _int_free 100ms 0.67% 80.88% 112ms 0.75% AbstractParameterisedSystem::SetAnyVariable 58ms 0.39% 81.27% 111ms 0.75% H5S_hyper_add_span_element 4ms 0.027% 81.30% 108ms 0.73% PMPI_Type_create_resized 102ms 0.69% 81.98% 105ms 0.71% __ieee754_log_fma 0 0% 81.98% 96ms 0.65% VecDuplicate 3ms 0.02% 82.00% 96ms 0.65% VecDuplicate_MPI 1ms 0.0067% 82.01% 96ms 0.65% VecNorm 2ms 0.013% 82.02% 96ms 0.65% VecTDot 0 0% 82.02% 94ms 0.63% VecTDot_Seq 2ms 0.013% 82.04% 94ms 0.63% VecXDot_Seq_Private.constprop.0 1ms 0.0067% 82.04% 92ms 0.62% VecNorm_Seq 2ms 0.013% 82.06% 91ms 0.61% ompi_datatype_duplicate 72ms 0.49% 82.54% 90ms 0.61% AbstractParameterisedSystem::GetAnyVariable 34ms 0.23% 82.77% 86ms 0.58% std::__cxx11::basic_string::basic_string 85ms 0.57% 83.34% 85ms 0.57% [libm.so.6] 13ms 0.088% 83.43% 84ms 0.57% std::vector::_M_assign_aux (inline) 0 0% 83.43% 84ms 0.57% std::vector::assign (inline) 24ms 0.16% 83.59% 82ms 0.55% ompi_datatype_set_args 81ms 0.55% 84.14% 81ms 0.55% H5VM_chunk_index_scaled 50ms 0.34% 84.48% 81ms 0.55% TimeStepper::AdvanceOneTimeStep 41ms 0.28% 84.75% 78ms 0.53% AbstractCardiacCell::GetVoltage (partial-inline) 24ms 0.16% 84.91% 75ms 0.51% __libc_calloc