File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 421ms, 87.34% of 482ms total Dropped 224 nodes (cum <= 2.41ms) flat flat% sum% cum cum% 0 0% 0% 475ms 98.55% __libc_start_call_main 0 0% 0% 475ms 98.55% __libc_start_main_impl 0 0% 0% 475ms 98.55% _start 0 0% 0% 472ms 97.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 472ms 97.93% CxxTest::TestRunner::runAllTests 0 0% 0% 472ms 97.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 472ms 97.93% main 0 0% 0% 430ms 89.21% CxxTest::RealTestDescription::run 0 0% 0% 430ms 89.21% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 430ms 89.21% CxxTest::TestRunner::runTest (inline) 0 0% 0% 430ms 89.21% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 430ms 89.21% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 425ms 88.17% AbstractCardiacProblem::Solve 0 0% 0% 424ms 87.97% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 379ms 78.63% KSPSolve 0 0% 0% 379ms 78.63% KSPSolve_Private 0 0% 0% 379ms 78.63% LinearSystem::Solve 0 0% 0% 378ms 78.42% KSPSolve_CG 0 0% 0% 230ms 47.72% KSP_PCApply.lto_priv.7 0 0% 0% 218ms 45.23% PCApply 0 0% 0% 217ms 45.02% PCApply_BJacobi_Singleblock 0 0% 0% 188ms 39.00% KSPSolve_PREONLY (partial-inline) 0 0% 0% 173ms 35.89% MatSolve 172ms 35.68% 35.68% 173ms 35.89% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.68% 173ms 35.89% PCApply_ICC 2ms 0.41% 36.10% 73ms 15.15% MatMult 1ms 0.21% 36.31% 71ms 14.73% MatMult_SeqAIJ (partial-inline) 69ms 14.32% 50.62% 71ms 14.73% MatMult_SeqAIJ_Inode (inline) 49ms 10.17% 60.79% 49ms 10.17% ddot_ 0 0% 60.79% 38ms 7.88% CxxTest::RealWorldDescription::setUp 0 0% 60.79% 38ms 7.88% MatNullSpaceRemove 0 0% 60.79% 38ms 7.88% PetscInitialize 0 0% 60.79% 38ms 7.88% PetscSetup::setUpWorld 0 0% 60.79% 38ms 7.88% PetscSetupUtils::CommonSetup 0 0% 60.79% 38ms 7.88% PetscSetupUtils::InitialisePetsc 0 0% 60.79% 37ms 7.68% AbstractCardiacTissue::SolveCellSystems 0 0% 60.79% 37ms 7.68% PMPI_Init_thread 0 0% 60.79% 37ms 7.68% ompi_mpi_init 0 0% 60.79% 33ms 6.85% VecTDot 0 0% 60.79% 33ms 6.85% VecTDot_Seq 0 0% 60.79% 33ms 6.85% VecXDot_Seq_Private.constprop.0 1ms 0.21% 61.00% 30ms 6.22% 0 0% 61.00% 23ms 4.77% AbstractCardiacCell::ComputeExceptVoltage 0 0% 61.00% 23ms 4.77% orte_init 0 0% 61.00% 21ms 4.36% VecMDot 2ms 0.41% 61.41% 21ms 4.36% VecMXDot_Private 1ms 0.21% 61.62% 20ms 4.15% AbstractOneStepIvpOdeSolver::InternalSolve 19ms 3.94% 65.56% 19ms 3.94% VecMDot_Seq 9ms 1.87% 67.43% 19ms 3.94% __GI___exp 1ms 0.21% 67.63% 17ms 3.53% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 67.63% 17ms 3.53% EulerIvpOdeSolver::CalculateNextYValue 0 0% 67.63% 17ms 3.53% VecMAXPY 17ms 3.53% 71.16% 17ms 3.53% VecMAXPY_Seq 0 0% 71.16% 16ms 3.32% KSP_PCApply (partial-inline) 0 0% 71.16% 16ms 3.32% VecAYPX 16ms 3.32% 74.48% 16ms 3.32% VecAYPX_Seq 0 0% 74.48% 16ms 3.32% VecNorm 0 0% 74.48% 16ms 3.32% VecNorm_Seq 0 0% 74.48% 15ms 3.11% hwloc_topology_load 0 0% 74.48% 14ms 2.90% __GI__dl_catch_exception 0 0% 74.48% 14ms 2.90% _dl_catch_error 0 0% 74.48% 14ms 2.90% _dlerror_run 1ms 0.21% 74.69% 14ms 2.90% hwloc_linux_get_tid_last_cpu_location 1ms 0.21% 74.90% 13ms 2.70% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 74.90% 13ms 2.70% mca_base_framework_open 0 0% 74.90% 12ms 2.49% opal_stackframe_output 4ms 0.83% 75.73% 11ms 2.28% CellLuoRudy1991FromCellML::GetIIonic 0 0% 75.73% 11ms 2.28% _dl_init 0 0% 75.73% 11ms 2.28% call_init (inline) 0 0% 75.73% 11ms 2.28% mca_base_framework_register 0 0% 75.73% 10ms 2.07% VecDuplicate 0 0% 75.73% 10ms 2.07% VecDuplicate_Seq 0 0% 75.73% 10ms 2.07% ___dlopen 0 0% 75.73% 10ms 2.07% _dl_open 0 0% 75.73% 10ms 2.07% dl_open_worker 0 0% 75.73% 10ms 2.07% dlopen_doit 0 0% 75.73% 10ms 2.07% dlopen_implementation (inline) 0 0% 75.73% 10ms 2.07% mca_base_framework_components_register 0 0% 75.73% 9ms 1.87% VecAXPY 0 0% 75.73% 9ms 1.87% VecAXPY_Seq 7ms 1.45% 77.18% 9ms 1.87% __ieee754_exp_fma 9ms 1.87% 79.05% 9ms 1.87% daxpy_ 0 0% 79.05% 9ms 1.87% mca_base_component_find 0 0% 79.05% 9ms 1.87% mca_base_component_repository_open 0 0% 79.05% 8ms 1.66% PetscMallocA 1ms 0.21% 79.25% 8ms 1.66% PetscMallocAlign 1ms 0.21% 79.46% 8ms 1.66% __GI___libc_malloc 0 0% 79.46% 7ms 1.45% _dl_start_user 0 0% 79.46% 7ms 1.45% opal_hwloc_base_get_topology 0 0% 79.46% 7ms 1.45% orte_ess_base_proc_binding 0 0% 79.46% 6ms 1.24% BidomainSolver::SetupLinearSystem 0 0% 79.46% 6ms 1.24% VecCreate_Seq 0 0% 79.46% 6ms 1.24% VecSetType 4ms 0.83% 80.29% 6ms 1.24% _int_malloc 0 0% 80.29% 6ms 1.24% dl_open_worker_begin 0 0% 80.29% 5ms 1.04% PetscMemcpy (inline) 2ms 0.41% 80.71% 5ms 1.04% VecCopy 0 0% 80.71% 5ms 1.04% __posix_memalign 2ms 0.41% 81.12% 5ms 1.04% _dl_runtime_resolve_xsavec 0 0% 81.12% 5ms 1.04% mca_base_framework_components_open 0 0% 81.12% 5ms 1.04% mca_topo_base_dist_graph_neighbors_count 0 0% 81.12% 4ms 0.83% AbstractCardiacProblem::Initialise 0 0% 81.12% 4ms 0.83% CxxTest::RealWorldDescription::tearDown 0 0% 81.12% 4ms 0.83% PetscFinalize 0 0% 81.12% 4ms 0.83% PetscSetup::tearDownWorld 0 0% 81.12% 4ms 0.83% PetscSetupUtils::CommonFinalize 0 0% 81.12% 4ms 0.83% VecCreate 4ms 0.83% 81.95% 4ms 0.83% __GI___libc_read 1ms 0.21% 82.16% 4ms 0.83% __cxa_finalize 4ms 0.83% 82.99% 4ms 0.83% __memcpy_avx_unaligned_erms 0 0% 82.99% 4ms 0.83% _dl_call_fini 0 0% 82.99% 4ms 0.83% _dl_lookup_symbol_x 0 0% 82.99% 4ms 0.83% _dl_map_object 1ms 0.21% 83.20% 4ms 0.83% boost::serialization::singleton::get_instance 0 0% 83.20% 4ms 0.83% ompi_mpi_finalize 0 0% 83.20% 3ms 0.62% VecCopy_Seq (partial-inline) 1ms 0.21% 83.40% 3ms 0.62% VecCreate_Seq_Private (partial-inline) 0 0% 83.40% 3ms 0.62% XOpenDisplay 0 0% 83.40% 3ms 0.62% [hwloc_gl.so] 0 0% 83.40% 3ms 0.62% [libxcb.so.1.1.0] 0 0% 83.40% 3ms 0.62% _XConnectXCB 3ms 0.62% 84.02% 3ms 0.62% __GI___clock_nanosleep 1ms 0.21% 84.23% 3ms 0.62% __GI___libc_free 0 0% 84.23% 3ms 0.62% __GI___nanosleep 0 0% 84.23% 3ms 0.62% __GI_exit 0 0% 84.23% 3ms 0.62% __dlclose 1ms 0.21% 84.44% 3ms 0.62% __ieee754_pow_fma 3ms 0.62% 85.06% 3ms 0.62% __libc_openat64 3ms 0.62% 85.68% 3ms 0.62% __mmap64 0 0% 85.68% 3ms 0.62% __pow 0 0% 85.68% 3ms 0.62% __run_exit_handlers 0 0% 85.68% 3ms 0.62% _dl_close 2ms 0.41% 86.10% 3ms 0.62% _dl_close_worker (inline) 0 0% 86.10% 3ms 0.62% _dl_fini 2ms 0.41% 86.51% 3ms 0.62% _dl_fixup 0 0% 86.51% 3ms 0.62% _dl_map_object_from_fd 0 0% 86.51% 3ms 0.62% _dl_map_segments (inline) 0 0% 86.51% 3ms 0.62% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 86.51% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.21% 86.72% 3ms 0.62% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 86.72% 3ms 0.62% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 3ms 0.62% 87.34% 3ms 0.62% do_lookup_x 0 0% 87.34% 3ms 0.62% mca_base_component_repository_release 0 0% 87.34% 3ms 0.62% mca_base_components_close 0 0% 87.34% 3ms 0.62% mca_base_var_group_register 0 0% 87.34% 3ms 0.62% mca_base_var_register 0 0% 87.34% 3ms 0.62% std::pow (inline) 0 0% 87.34% 3ms 0.62% usleep 0 0% 87.34% 3ms 0.62% xcb_connect_to_display_with_auth_info