File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116114ms, 91.37% of 127088ms total Dropped 1154 nodes (cum <= 635.44ms) flat flat% sum% cum cum% 0 0% 0% 127077ms 100% __libc_start_call_main 0 0% 0% 127077ms 100% __libc_start_main_impl 0 0% 0% 127077ms 100% _start 0 0% 0% 127074ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 127074ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 127074ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 127074ms 100% main 0 0% 0% 127029ms 100% AbstractConvergenceTester::Converge 0 0% 0% 127029ms 100% CxxTest::RealTestDescription::run 0 0% 0% 127029ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 127029ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 127029ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 127029ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 7ms 0.0055% 0.0055% 125837ms 99.02% AbstractCardiacProblem::Solve 10ms 0.0079% 0.013% 125013ms 98.37% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0024% 0.016% 68835ms 54.16% LinearSystem::Solve 1ms 0.00079% 0.017% 68344ms 53.78% KSPSolve 19ms 0.015% 0.031% 68344ms 53.78% KSPSolve_Private 11ms 0.0087% 0.04% 68023ms 53.52% KSPSolve_SYMMLQ 430ms 0.34% 0.38% 46915ms 36.92% AbstractCardiacTissue::SolveCellSystems 6ms 0.0047% 0.38% 39545ms 31.12% PCApply 3ms 0.0024% 0.39% 39531ms 31.11% PCApply_BJacobi_Singleblock 4ms 0.0031% 0.39% 37083ms 29.18% KSPSolve_PREONLY (partial-inline) 987ms 0.78% 1.17% 36675ms 28.86% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 5ms 0.0039% 1.17% 35924ms 28.27% PCApply_ICC 10ms 0.0079% 1.18% 35919ms 28.26% MatSolve 35480ms 27.92% 29.09% 35909ms 28.26% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.00079% 29.10% 34082ms 26.82% KSP_PCApply.lto_priv.18 7538ms 5.93% 35.03% 32420ms 25.51% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.0047% 35.03% 22660ms 17.83% MatMult 324ms 0.25% 35.29% 22654ms 17.83% MatMult_SeqAIJ (partial-inline) 22126ms 17.41% 52.70% 22651ms 17.82% MatMult_SeqAIJ_Inode (inline) 2234ms 1.76% 54.45% 16899ms 13.30% CardiacNewtonSolver::Solve 5639ms 4.44% 58.89% 10101ms 7.95% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1555ms 1.22% 60.12% 9540ms 7.51% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 201ms 0.16% 60.27% 8944ms 7.04% AbstractCardiacTissue::UpdateCaches (inline) 1720ms 1.35% 61.63% 8390ms 6.60% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1232ms 0.97% 62.60% 8100ms 6.37% BidomainSolver::SetupLinearSystem 7671ms 6.04% 68.63% 7671ms 6.04% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 68.63% 7392ms 5.82% KSP_PCApply (partial-inline) 9ms 0.0071% 68.64% 6932ms 5.45% KSPConvergedDefault 4173ms 3.28% 71.92% 4276ms 3.36% __ieee754_log_fma 0 0% 71.92% 4128ms 3.25% boost::numeric::ublas::norm_inf (inline) 2856ms 2.25% 74.17% 4128ms 3.25% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.17% 4128ms 3.25% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.17% 4128ms 3.25% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 5ms 0.0039% 74.17% 3320ms 2.61% MatNullSpaceRemove 3309ms 2.60% 76.78% 3309ms 2.60% ddot_ 38ms 0.03% 76.81% 3139ms 2.47% std::pow (inline) 397ms 0.31% 77.12% 3081ms 2.42% __pow 2005ms 1.58% 78.70% 3057ms 2.41% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2999ms 2.36% 81.06% 2999ms 2.36% __memcpy_avx_unaligned_erms 0 0% 81.06% 2969ms 2.34% PetscMemcpy (inline) 362ms 0.28% 81.34% 2650ms 2.09% __ieee754_pow_fma 8ms 0.0063% 81.35% 2595ms 2.04% VecDot 2ms 0.0016% 81.35% 2587ms 2.04% VecDot_Seq 1ms 0.00079% 81.35% 2585ms 2.03% VecXDot_Seq_Private.constprop.0 24ms 0.019% 81.37% 2567ms 2.02% VecCopy 2ms 0.0016% 81.37% 2542ms 2.00% VecCopy_Seq (partial-inline) 12ms 0.0094% 81.38% 2090ms 1.64% VecAXPY 1ms 0.00079% 81.38% 2086ms 1.64% VecMDot 11ms 0.0087% 81.39% 2085ms 1.64% VecMXDot_Private 3ms 0.0024% 81.39% 2078ms 1.64% VecAXPY_Seq 2067ms 1.63% 83.02% 2073ms 1.63% VecMDot_Seq 2062ms 1.62% 84.64% 2062ms 1.62% daxpy_ 0 0% 84.64% 2026ms 1.59% AbstractFeVolumeIntegralAssembler::DoAssemble 29ms 0.023% 84.66% 1663ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1532ms 1.21% 85.87% 1587ms 1.25% exp_inline (inline) 0 0% 85.87% 1396ms 1.10% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.87% 1263ms 0.99% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.87% 1263ms 0.99% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.87% 1263ms 0.99% boost_numeric_ublas_abs (inline) 1263ms 0.99% 86.86% 1263ms 0.99% std::abs (inline) 16ms 0.013% 86.88% 1229ms 0.97% VecMAXPY 1199ms 0.94% 87.82% 1213ms 0.95% VecMAXPY_Seq 7ms 0.0055% 87.82% 1125ms 0.89% boost::numeric::ublas::matrix_assign (inline) 225ms 0.18% 88.00% 1115ms 0.88% boost::numeric::ublas::indexing_matrix_assign 733ms 0.58% 88.58% 1059ms 0.83% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.58% 1034ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.58% 1034ms 0.81% CuboidMeshConstructor::Construct 1ms 0.00079% 88.58% 1034ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 2ms 0.0016% 88.58% 1028ms 0.81% VecNorm 1ms 0.00079% 88.58% 1013ms 0.8% VecNorm_Seq 969ms 0.76% 89.34% 969ms 0.76% [libchaste_heart.so] 3ms 0.0024% 89.35% 916ms 0.72% Element::Element 13ms 0.01% 89.36% 898ms 0.71% VecScale 1ms 0.00079% 89.36% 886ms 0.7% AbstractTetrahedralElement::CalculateJacobian 5ms 0.0039% 89.36% 885ms 0.7% VecScale_Seq 5ms 0.0039% 89.37% 877ms 0.69% BidomainAssembler::ComputeMatrixTerm 877ms 0.69% 90.06% 877ms 0.69% dscal_ 1ms 0.00079% 90.06% 849ms 0.67% AbstractTetrahedralElement::AbstractTetrahedralElement 5ms 0.0039% 90.06% 843ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 0 0% 90.06% 819ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 238ms 0.19% 90.25% 815ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 90.25% 751ms 0.59% BidomainProblem::WriteOneStep 749ms 0.59% 90.84% 749ms 0.59% __memset_avx2_unaligned_erms 0 0% 90.84% 742ms 0.58% PetscMemzero (inline) 1ms 0.00079% 90.84% 717ms 0.56% VecNorm_MPI 3ms 0.0024% 90.84% 716ms 0.56% VecNorm_MPI_Default.constprop.0 3ms 0.0024% 90.84% 684ms 0.54% VecDuplicate 664ms 0.52% 91.37% 664ms 0.52% log_inline (inline)