File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12742ms, 85.89% of 14836ms total Dropped 751 nodes (cum <= 74.18ms) flat flat% sum% cum cum% 0 0% 0% 14826ms 99.93% __libc_start_call_main 0 0% 0% 14826ms 99.93% __libc_start_main_impl 0 0% 0% 14826ms 99.93% _start 0 0% 0% 14823ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14823ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14823ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14823ms 99.91% main 0 0% 0% 14785ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14785ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14785ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14763ms 99.51% AbstractCardiacProblem::Solve 1ms 0.0067% 0.013% 11419ms 76.97% AbstractDynamicLinearPdeSolver::Solve 64ms 0.43% 0.44% 9033ms 60.89% AbstractCardiacTissue::SolveCellSystems 105ms 0.71% 1.15% 5447ms 36.71% AbstractCardiacCell::ComputeExceptVoltage 106ms 0.71% 1.87% 4805ms 32.39% AbstractOneStepIvpOdeSolver::InternalSolve 175ms 1.18% 3.05% 4146ms 27.95% EulerIvpOdeSolver::CalculateNextYValue 941ms 6.34% 9.39% 3932ms 26.50% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1879ms 12.67% 22.05% 3600ms 24.27% __GI___exp 0 0% 22.05% 3276ms 22.08% MonodomainProblem::WriteOneStep 2ms 0.013% 22.07% 3134ms 21.12% Hdf5DataWriter::PutVector 1ms 0.0067% 22.07% 3122ms 21.04% H5Dwrite 2ms 0.013% 22.09% 3092ms 20.84% H5D__write 106ms 0.71% 22.80% 2842ms 19.16% AbstractCardiacTissue::UpdateCaches (inline) 812ms 5.47% 28.28% 2652ms 17.88% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 28.28% 1842ms 12.42% H5D__chunk_collective_write 14ms 0.094% 28.38% 1841ms 12.41% H5F_set_coll_metadata_reads 1343ms 9.05% 37.43% 1642ms 11.07% __ieee754_exp_fma 16ms 0.11% 37.54% 1637ms 11.03% H5FD_s3comms_uriencode 2ms 0.013% 37.55% 1602ms 10.80% LinearSystem::Solve 1ms 0.0067% 37.56% 1493ms 10.06% KSPSolve 6ms 0.04% 37.60% 1492ms 10.06% KSPSolve_Private 4ms 0.027% 37.62% 1481ms 9.98% KSPSolve_CG 40ms 0.27% 37.89% 1315ms 8.86% 1ms 0.0067% 37.90% 1304ms 8.79% H5F_block_write 2ms 0.013% 37.91% 1303ms 8.78% H5PB_write 1ms 0.0067% 37.92% 1301ms 8.77% H5F__accum_write 2ms 0.013% 37.93% 1300ms 8.76% H5FD_write 0 0% 37.93% 1211ms 8.16% H5D__mpio_select_write 7ms 0.047% 37.98% 1141ms 7.69% H5D__chunk_cacheable 0 0% 37.98% 1129ms 7.61% PMPI_File_write_at_all 1108ms 7.47% 45.45% 1114ms 7.51% __GI_pwritev64 319ms 2.15% 47.60% 991ms 6.68% H5S_select_iterate 1ms 0.0067% 47.61% 926ms 6.24% std::pow (inline) 99ms 0.67% 48.27% 925ms 6.23% __pow 90ms 0.61% 48.88% 824ms 5.55% __ieee754_pow_fma 1ms 0.0067% 48.89% 803ms 5.41% PCApply 0 0% 48.89% 799ms 5.39% PCApply_BJacobi_Singleblock 0 0% 48.89% 771ms 5.20% KSPSolve_PREONLY 4ms 0.027% 48.91% 767ms 5.17% MatSolve 0 0% 48.91% 767ms 5.17% PCApply_ICC 334ms 2.25% 51.17% 766ms 5.16% MonodomainSolver::SetupLinearSystem 754ms 5.08% 56.25% 763ms 5.14% MatSolve_SeqSBAIJ_1_NaturalOrdering 85ms 0.57% 56.82% 682ms 4.60% H5D__chunk_set_sizes 6ms 0.04% 56.86% 644ms 4.34% MatMult 635ms 4.28% 61.14% 638ms 4.30% MatMult_SeqAIJ 0 0% 61.14% 585ms 3.94% KSP_PCApply.lto_priv.7 277ms 1.87% 63.01% 478ms 3.22% CellLuoRudy1991FromCellML::VerifyStateVariables 65ms 0.44% 63.45% 432ms 2.91% H5S_mpio_space_type 425ms 2.86% 66.31% 425ms 2.86% log_inline (inline) 0 0% 66.31% 281ms 1.89% KSPConvergedDefault 269ms 1.81% 68.12% 277ms 1.87% exp_inline (inline) 113ms 0.76% 68.89% 260ms 1.75% TimeStepper::TimeStepper 9ms 0.061% 68.95% 254ms 1.71% H5VM_chunk_index 236ms 1.59% 70.54% 236ms 1.59% [libchaste_heart.so] 171ms 1.15% 71.69% 229ms 1.54% top12 (inline) 0 0% 71.69% 220ms 1.48% KSP_PCApply 186ms 1.25% 72.94% 186ms 1.25% ddot_ 10ms 0.067% 73.01% 169ms 1.14% MPI_Type_free 45ms 0.3% 73.31% 168ms 1.13% __GI___libc_malloc 168ms 1.13% 74.45% 168ms 1.13% asuint64 (inline) 12ms 0.081% 74.53% 165ms 1.11% ompi_datatype_destroy 43ms 0.29% 74.82% 162ms 1.09% AbstractCardiacCell::SetVoltage (partial-inline) 24ms 0.16% 74.98% 160ms 1.08% __GI___libc_free 125ms 0.84% 75.82% 152ms 1.02% _int_malloc 105ms 0.71% 76.53% 151ms 1.02% AbstractOneStepIvpOdeSolver::Solve 0 0% 76.53% 142ms 0.96% Hdf5DataWriter::PutUnlimitedVariable 13ms 0.088% 76.62% 141ms 0.95% ompi_datatype_create 38ms 0.26% 76.87% 140ms 0.94% ompi_datatype_release_args 2ms 0.013% 76.89% 140ms 0.94% ompi_info_register_framework_params 60ms 0.4% 77.29% 138ms 0.93% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 136ms 0.92% 78.21% 136ms 0.92% TimeStepper::CalculateNextTime 51ms 0.34% 78.55% 136ms 0.92% _int_free 134ms 0.9% 79.46% 134ms 0.9% H5VM_chunk_index_scaled 68ms 0.46% 79.91% 132ms 0.89% H5S_hyper_add_span_element 124ms 0.84% 80.75% 124ms 0.84% __memcpy_avx_unaligned_erms 28ms 0.19% 80.94% 118ms 0.8% H5S_set_version 2ms 0.013% 80.95% 116ms 0.78% VecNorm 1ms 0.0067% 80.96% 114ms 0.77% VecNorm_Seq 88ms 0.59% 81.55% 112ms 0.75% AbstractParameterisedSystem::GetAnyVariable 112ms 0.75% 82.31% 112ms 0.75% H5VM_array_offset_pre 87ms 0.59% 82.89% 109ms 0.73% AbstractParameterisedSystem::SetAnyVariable 90ms 0.61% 83.50% 108ms 0.73% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 108ms 0.73% 84.23% 108ms 0.73% __ieee754_log_fma 3ms 0.02% 84.25% 102ms 0.69% PMPI_File_set_view 0 0% 84.25% 99ms 0.67% VecTDot 0 0% 84.25% 99ms 0.67% VecTDot_Seq 0 0% 84.25% 99ms 0.67% VecXDot_Seq_Private.constprop.0 39ms 0.26% 84.51% 94ms 0.63% AbstractCardiacCell::GetVoltage (partial-inline) 36ms 0.24% 84.75% 90ms 0.61% H5VM_array_calc 0 0% 84.75% 88ms 0.59% PMPI_Type_create_resized 4ms 0.027% 84.78% 87ms 0.59% ompi_datatype_duplicate 1ms 0.0067% 84.79% 86ms 0.58% VecDuplicate 4ms 0.027% 84.81% 85ms 0.57% VecDuplicate_MPI 81ms 0.55% 85.36% 81ms 0.55% [libm.so.6] 0 0% 85.36% 81ms 0.55% std::vector::_M_assign_aux (inline) 0 0% 85.36% 81ms 0.55% std::vector::assign (inline) 78ms 0.53% 85.89% 78ms 0.53% std::isinf (inline)