File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 94300ms, 91.72% of 102813ms total Dropped 1109 nodes (cum <= 514.07ms) flat flat% sum% cum cum% 0 0% 0% 102802ms 100% __libc_start_call_main 0 0% 0% 102802ms 100% __libc_start_main_impl 0 0% 0% 102802ms 100% _start 0 0% 0% 102799ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 102799ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 102799ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 102799ms 100% main 0 0% 0% 102760ms 99.95% CxxTest::RealTestDescription::run 0 0% 0% 102760ms 99.95% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 102760ms 99.95% CxxTest::TestRunner::runTest (inline) 0 0% 0% 102760ms 99.95% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 102760ms 99.95% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 1ms 0.00097% 0.00097% 102759ms 99.95% AbstractConvergenceTester::Converge 5ms 0.0049% 0.0058% 101816ms 99.03% AbstractCardiacProblem::Solve 8ms 0.0078% 0.014% 101048ms 98.28% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0049% 0.018% 56906ms 55.35% LinearSystem::Solve 2ms 0.0019% 0.02% 56416ms 54.87% KSPSolve 9ms 0.0088% 0.029% 56416ms 54.87% KSPSolve_Private 9ms 0.0088% 0.038% 56131ms 54.60% KSPSolve_SYMMLQ 445ms 0.43% 0.47% 36703ms 35.70% AbstractCardiacTissue::SolveCellSystems 6ms 0.0058% 0.48% 31189ms 30.34% PCApply 5ms 0.0049% 0.48% 31178ms 30.32% PCApply_BJacobi_Singleblock 0 0% 0.48% 29372ms 28.57% KSPSolve_PREONLY (partial-inline) 1ms 0.00097% 0.48% 28569ms 27.79% PCApply_ICC 12ms 0.012% 0.49% 28568ms 27.79% MatSolve 28215ms 27.44% 27.94% 28556ms 27.77% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 887ms 0.86% 28.80% 28438ms 27.66% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0029% 28.80% 26695ms 25.96% KSP_PCApply.lto_priv.18 6015ms 5.85% 34.65% 24994ms 24.31% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 6ms 0.0058% 34.66% 20505ms 19.94% MatMult 184ms 0.18% 34.84% 20499ms 19.94% MatMult_SeqAIJ (partial-inline) 20070ms 19.52% 54.36% 20497ms 19.94% MatMult_SeqAIJ_Inode (inline) 1741ms 1.69% 56.05% 13154ms 12.79% CardiacNewtonSolver::Solve 4296ms 4.18% 60.23% 7811ms 7.60% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 181ms 0.18% 60.41% 7007ms 6.82% AbstractCardiacTissue::UpdateCaches (inline) 1076ms 1.05% 61.45% 6889ms 6.70% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1248ms 1.21% 62.67% 6558ms 6.38% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 878ms 0.85% 63.52% 6522ms 6.34% BidomainSolver::SetupLinearSystem 2ms 0.0019% 63.52% 6018ms 5.85% KSP_PCApply (partial-inline) 3ms 0.0029% 63.53% 5677ms 5.52% KSPConvergedDefault 5574ms 5.42% 68.95% 5574ms 5.42% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3259ms 3.17% 72.12% 3344ms 3.25% __ieee754_log_fma 0 0% 72.12% 3238ms 3.15% boost::numeric::ublas::norm_inf (inline) 2230ms 2.17% 74.29% 3238ms 3.15% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.29% 3238ms 3.15% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.29% 3238ms 3.15% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 5ms 0.0049% 74.29% 2639ms 2.57% MatNullSpaceRemove 2568ms 2.50% 76.79% 2568ms 2.50% ddot_ 21ms 0.02% 76.81% 2465ms 2.40% std::pow (inline) 344ms 0.33% 77.14% 2438ms 2.37% __pow 2426ms 2.36% 79.50% 2426ms 2.36% __memcpy_avx512_unaligned_erms 1567ms 1.52% 81.03% 2409ms 2.34% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 0 0% 81.03% 2395ms 2.33% PetscMemcpy (inline) 1ms 0.00097% 81.03% 2101ms 2.04% VecDot 0 0% 81.03% 2100ms 2.04% VecDot_Seq 3ms 0.0029% 81.03% 2100ms 2.04% VecXDot_Seq_Private.constprop.0 16ms 0.016% 81.05% 2068ms 2.01% VecCopy 282ms 0.27% 81.32% 2066ms 2.01% __ieee754_pow_fma 3ms 0.0029% 81.32% 2051ms 1.99% VecCopy_Seq (partial-inline) 16ms 0.016% 81.34% 1823ms 1.77% VecAXPY 1ms 0.00097% 81.34% 1807ms 1.76% VecAXPY_Seq 1798ms 1.75% 83.09% 1798ms 1.75% daxpy_ 2ms 0.0019% 83.09% 1620ms 1.58% VecMDot 7ms 0.0068% 83.10% 1618ms 1.57% VecMXDot_Private 1601ms 1.56% 84.66% 1606ms 1.56% VecMDot_Seq 0 0% 84.66% 1566ms 1.52% AbstractFeVolumeIntegralAssembler::DoAssemble 11ms 0.011% 84.67% 1313ms 1.28% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1186ms 1.15% 85.82% 1230ms 1.20% exp_inline (inline) 0 0% 85.82% 1082ms 1.05% AbstractFeAssemblerInterface::AssembleMatrix (inline) 7ms 0.0068% 85.83% 1014ms 0.99% VecMAXPY 1004ms 0.98% 86.80% 1007ms 0.98% VecMAXPY_Seq 0 0% 86.80% 1004ms 0.98% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.80% 1004ms 0.98% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.80% 1004ms 0.98% boost_numeric_ublas_abs (inline) 1004ms 0.98% 87.78% 1004ms 0.98% std::abs (inline) 567ms 0.55% 88.33% 859ms 0.84% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 6ms 0.0058% 88.34% 837ms 0.81% boost::numeric::ublas::matrix_assign (inline) 187ms 0.18% 88.52% 828ms 0.81% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.52% 798ms 0.78% CuboidMeshConstructor::Construct 0 0% 88.52% 797ms 0.78% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00097% 88.52% 797ms 0.78% DistributedTetrahedralMesh::ConstructCuboid 751ms 0.73% 89.25% 751ms 0.73% [libchaste_heart.so] 2ms 0.0019% 89.25% 721ms 0.7% VecNorm 2ms 0.0019% 89.25% 708ms 0.69% VecNorm_Seq 7ms 0.0068% 89.26% 704ms 0.68% AbstractTetrahedralElement::CalculateJacobian 1ms 0.00097% 89.26% 699ms 0.68% BidomainProblem::WriteOneStep 4ms 0.0039% 89.27% 693ms 0.67% Element::Element 4ms 0.0039% 89.27% 666ms 0.65% BidomainAssembler::ComputeMatrixTerm 10ms 0.0097% 89.28% 654ms 0.64% VecScale 2ms 0.0019% 89.28% 653ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 3ms 0.0029% 89.28% 644ms 0.63% VecScale_Seq 639ms 0.62% 89.91% 639ms 0.62% dscal_ 0 0% 89.91% 631ms 0.61% AbstractBidomainSolver::FinaliseLinearSystem 8ms 0.0078% 89.91% 631ms 0.61% boost::numeric::ublas::c_matrix::c_matrix (inline) 187ms 0.18% 90.10% 629ms 0.61% AbstractBidomainSolver::CheckCompatibilityCondition 2ms 0.0019% 90.10% 594ms 0.58% VecDuplicate 581ms 0.57% 90.66% 581ms 0.57% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 561ms 0.55% 91.21% 561ms 0.55% __memset_avx512_unaligned_erms 0 0% 91.21% 550ms 0.53% PetscMemzero (inline) 526ms 0.51% 91.72% 526ms 0.51% log_inline (inline)