File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 9896ms, 86.63% of 11423ms total Dropped 672 nodes (cum <= 57.12ms) flat flat% sum% cum cum% 0 0% 0% 11416ms 99.94% __libc_start_call_main 0 0% 0% 11416ms 99.94% __libc_start_main_impl 0 0% 0% 11416ms 99.94% _start 0 0% 0% 11414ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 11414ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 11414ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 11414ms 99.92% main 0 0% 0% 11379ms 99.61% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 11379ms 99.61% CxxTest::TestRunner::runTest (inline) 0 0% 0% 11379ms 99.61% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.018% 0.018% 11362ms 99.47% AbstractCardiacProblem::Solve 1ms 0.0088% 0.026% 8867ms 77.62% AbstractDynamicLinearPdeSolver::Solve 65ms 0.57% 0.6% 7163ms 62.71% AbstractCardiacTissue::SolveCellSystems 62ms 0.54% 1.14% 4351ms 38.09% AbstractCardiacCell::ComputeExceptVoltage 90ms 0.79% 1.93% 3819ms 33.43% AbstractOneStepIvpOdeSolver::InternalSolve 145ms 1.27% 3.20% 3199ms 28.00% EulerIvpOdeSolver::CalculateNextYValue 701ms 6.14% 9.33% 3030ms 26.53% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1391ms 12.18% 21.51% 2795ms 24.47% __GI___exp 1ms 0.0088% 21.52% 2441ms 21.37% MonodomainProblem::WriteOneStep 0 0% 21.52% 2371ms 20.76% Hdf5DataWriter::PutVector 4ms 0.035% 21.55% 2352ms 20.59% H5Dwrite 1ms 0.0088% 21.56% 2334ms 20.43% H5D__write 92ms 0.81% 22.37% 2229ms 19.51% AbstractCardiacTissue::UpdateCaches (inline) 658ms 5.76% 28.13% 2081ms 18.22% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0088% 28.14% 1440ms 12.61% H5D__chunk_collective_write 11ms 0.096% 28.23% 1439ms 12.60% H5F_set_coll_metadata_reads 1098ms 9.61% 37.84% 1346ms 11.78% __ieee754_exp_fma 9ms 0.079% 37.92% 1274ms 11.15% H5FD_s3comms_uriencode 0 0% 37.92% 1075ms 9.41% LinearSystem::Solve 22ms 0.19% 38.12% 1020ms 8.93% 1ms 0.0088% 38.12% 1014ms 8.88% H5F_block_write 0 0% 38.12% 1013ms 8.87% H5FD_write 0 0% 38.12% 1013ms 8.87% H5F__accum_write 0 0% 38.12% 1013ms 8.87% H5PB_write 0 0% 38.12% 1010ms 8.84% KSPSolve 3ms 0.026% 38.15% 1010ms 8.84% KSPSolve_Private 2ms 0.018% 38.17% 1002ms 8.77% KSPSolve_CG 0 0% 38.17% 952ms 8.33% H5D__mpio_select_write 1ms 0.0088% 38.18% 893ms 7.82% PMPI_File_write_at_all 873ms 7.64% 45.82% 874ms 7.65% __GI_pwritev64 4ms 0.035% 45.85% 828ms 7.25% H5D__chunk_cacheable 240ms 2.10% 47.96% 720ms 6.30% H5S_select_iterate 4ms 0.035% 47.99% 712ms 6.23% std::pow (inline) 71ms 0.62% 48.61% 706ms 6.18% __pow 68ms 0.6% 49.21% 635ms 5.56% __ieee754_pow_fma 303ms 2.65% 51.86% 612ms 5.36% MonodomainSolver::SetupLinearSystem 1ms 0.0088% 51.87% 578ms 5.06% PCApply 1ms 0.0088% 51.88% 576ms 5.04% PCApply_BJacobi_Singleblock 0 0% 51.88% 553ms 4.84% KSPSolve_PREONLY 1ms 0.0088% 51.89% 551ms 4.82% PCApply_ICC 1ms 0.0088% 51.90% 550ms 4.81% MatSolve 545ms 4.77% 56.67% 549ms 4.81% MatSolve_SeqSBAIJ_1_NaturalOrdering 53ms 0.46% 57.13% 490ms 4.29% H5D__chunk_set_sizes 3ms 0.026% 57.16% 359ms 3.14% MatMult 353ms 3.09% 60.25% 356ms 3.12% MatMult_SeqAIJ 177ms 1.55% 61.80% 349ms 3.06% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0088% 61.81% 341ms 2.99% KSP_PCApply.lto_priv.7 43ms 0.38% 62.18% 322ms 2.82% H5S_mpio_space_type 0 0% 62.18% 296ms 2.59% KSPConvergedDefault 295ms 2.58% 64.76% 295ms 2.58% log_inline (inline) 1ms 0.0088% 64.77% 239ms 2.09% KSP_PCApply 108ms 0.95% 65.72% 236ms 2.07% TimeStepper::TimeStepper 228ms 2.00% 67.71% 235ms 2.06% exp_inline (inline) 152ms 1.33% 69.04% 203ms 1.78% top12 (inline) 202ms 1.77% 70.81% 202ms 1.77% [libchaste_heart.so] 41ms 0.36% 71.17% 173ms 1.51% AbstractCardiacCell::SetVoltage (partial-inline) 12ms 0.11% 71.28% 164ms 1.44% H5VM_chunk_index 21ms 0.18% 71.46% 143ms 1.25% __GI___libc_free 140ms 1.23% 72.69% 140ms 1.23% asuint64 (inline) 27ms 0.24% 72.92% 139ms 1.22% __GI___libc_malloc 111ms 0.97% 73.89% 133ms 1.16% _int_malloc 132ms 1.16% 75.05% 132ms 1.16% ddot_ 6ms 0.053% 75.10% 127ms 1.11% ompi_datatype_destroy 2ms 0.018% 75.12% 124ms 1.09% MPI_Type_free 104ms 0.91% 76.03% 123ms 1.08% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 123ms 1.08% 77.11% 123ms 1.08% TimeStepper::CalculateNextTime 45ms 0.39% 77.50% 122ms 1.07% _int_free 5ms 0.044% 77.55% 120ms 1.05% ompi_datatype_create 28ms 0.25% 77.79% 118ms 1.03% ompi_datatype_release_args 4ms 0.035% 77.83% 118ms 1.03% ompi_info_register_framework_params 90ms 0.79% 78.61% 108ms 0.95% AbstractParameterisedSystem::SetAnyVariable 30ms 0.26% 78.88% 107ms 0.94% H5S_set_version 107ms 0.94% 79.81% 107ms 0.94% __memcpy_avx512_unaligned_erms 76ms 0.67% 80.48% 101ms 0.88% AbstractOneStepIvpOdeSolver::Solve 38ms 0.33% 80.81% 94ms 0.82% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 80.81% 92ms 0.81% std::vector::_M_assign_aux (inline) 0 0% 80.81% 92ms 0.81% std::vector::assign (inline) 0 0% 80.81% 84ms 0.74% VecTDot 0 0% 80.81% 84ms 0.74% VecTDot_Seq 1ms 0.0088% 80.82% 84ms 0.74% VecXDot_Seq_Private.constprop.0 9ms 0.079% 80.90% 84ms 0.74% std::__copy_move::__copy_m (inline) 0 0% 80.90% 84ms 0.74% std::__copy_move_a (inline) 0 0% 80.90% 84ms 0.74% std::__copy_move_a1 (inline) 0 0% 80.90% 84ms 0.74% std::__copy_move_a2 (inline) 0 0% 80.90% 84ms 0.74% std::copy (inline) 83ms 0.73% 81.62% 83ms 0.73% H5VM_chunk_index_scaled 71ms 0.62% 82.25% 82ms 0.72% AbstractParameterisedSystem::GetAnyVariable 38ms 0.33% 82.58% 78ms 0.68% H5S_hyper_add_span_element 78ms 0.68% 83.26% 78ms 0.68% __ieee754_log_fma 28ms 0.25% 83.51% 77ms 0.67% H5VM_array_calc 30ms 0.26% 83.77% 76ms 0.67% AbstractCardiacCell::GetVoltage (partial-inline) 2ms 0.018% 83.79% 76ms 0.67% PMPI_File_set_view 0 0% 83.79% 71ms 0.62% VecNorm 69ms 0.6% 84.39% 69ms 0.6% H5VM_array_offset_pre 0 0% 84.39% 69ms 0.6% Hdf5DataWriter::PutUnlimitedVariable 46ms 0.4% 84.79% 66ms 0.58% TimeStepper::AdvanceOneTimeStep 0 0% 84.79% 65ms 0.57% VecNorm_Seq 63ms 0.55% 85.35% 63ms 0.55% TimeStepper::GetNextTimeStep 1ms 0.0088% 85.35% 61ms 0.53% ompi_datatype_duplicate 60ms 0.53% 85.88% 60ms 0.53% std::isinf (inline) 2ms 0.018% 85.90% 59ms 0.52% PMPI_Type_create_resized 22ms 0.19% 86.09% 59ms 0.52% __libc_calloc 58ms 0.51% 86.60% 58ms 0.51% [libm.so.6] 4ms 0.035% 86.63% 58ms 0.51% opal_datatype_create_desc