File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12920ms, 86.75% of 14894ms total Dropped 742 nodes (cum <= 74.47ms) flat flat% sum% cum cum% 0 0% 0% 14885ms 99.94% __libc_start_call_main 0 0% 0% 14885ms 99.94% __libc_start_main_impl 0 0% 0% 14885ms 99.94% _start 0 0% 0% 14882ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14882ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14882ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14882ms 99.92% main 0 0% 0% 14843ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14843ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14843ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14822ms 99.52% AbstractCardiacProblem::Solve 2ms 0.013% 0.034% 11457ms 76.92% AbstractDynamicLinearPdeSolver::Solve 36ms 0.24% 0.28% 9199ms 61.76% AbstractCardiacTissue::SolveCellSystems 147ms 0.99% 1.26% 5774ms 38.77% AbstractCardiacCell::ComputeExceptVoltage 184ms 1.24% 2.50% 4970ms 33.37% AbstractOneStepIvpOdeSolver::InternalSolve 170ms 1.14% 3.64% 4205ms 28.23% EulerIvpOdeSolver::CalculateNextYValue 953ms 6.40% 10.04% 3977ms 26.70% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1710ms 11.48% 21.52% 3580ms 24.04% __GI___exp 0 0% 21.52% 3292ms 22.10% MonodomainProblem::WriteOneStep 2ms 0.013% 21.53% 3147ms 21.13% Hdf5DataWriter::PutVector 2ms 0.013% 21.55% 3137ms 21.06% H5Dwrite 3ms 0.02% 21.57% 3114ms 20.91% H5D__write 93ms 0.62% 22.19% 2613ms 17.54% AbstractCardiacTissue::UpdateCaches (inline) 863ms 5.79% 27.98% 2478ms 16.64% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 28.00% 1805ms 12.12% H5D__chunk_collective_write 6ms 0.04% 28.04% 1803ms 12.11% H5F_set_coll_metadata_reads 1629ms 10.94% 38.98% 1787ms 12.00% __ieee754_exp_fma 21ms 0.14% 39.12% 1624ms 10.90% H5FD_s3comms_uriencode 3ms 0.02% 39.14% 1458ms 9.79% LinearSystem::Solve 0 0% 39.14% 1307ms 8.78% KSPSolve 7ms 0.047% 39.18% 1307ms 8.78% KSPSolve_Private 1ms 0.0067% 39.19% 1296ms 8.70% KSPSolve_CG 45ms 0.3% 39.49% 1275ms 8.56% 4ms 0.027% 39.52% 1271ms 8.53% H5F_block_write 1ms 0.0067% 39.53% 1267ms 8.51% H5F__accum_write 0 0% 39.53% 1267ms 8.51% H5PB_write 1ms 0.0067% 39.53% 1266ms 8.50% H5FD_write 12ms 0.081% 39.61% 1197ms 8.04% H5D__chunk_cacheable 3ms 0.02% 39.63% 1181ms 7.93% H5D__mpio_select_write 0 0% 39.63% 1095ms 7.35% PMPI_File_write_at_all 1067ms 7.16% 46.80% 1070ms 7.18% __GI_pwritev64 422ms 2.83% 49.63% 1044ms 7.01% H5S_select_iterate 5ms 0.034% 49.66% 838ms 5.63% std::pow (inline) 101ms 0.68% 50.34% 833ms 5.59% __pow 340ms 2.28% 52.63% 777ms 5.22% MonodomainSolver::SetupLinearSystem 96ms 0.64% 53.27% 731ms 4.91% __ieee754_pow_fma 1ms 0.0067% 53.28% 672ms 4.51% PCApply 3ms 0.02% 53.30% 670ms 4.50% PCApply_BJacobi_Singleblock 275ms 1.85% 55.14% 635ms 4.26% CellLuoRudy1991FromCellML::VerifyStateVariables 3ms 0.02% 55.16% 632ms 4.24% MatMult 73ms 0.49% 55.65% 631ms 4.24% H5D__chunk_set_sizes 627ms 4.21% 59.86% 629ms 4.22% MatMult_SeqAIJ 1ms 0.0067% 59.87% 621ms 4.17% KSPSolve_PREONLY 1ms 0.0067% 59.88% 618ms 4.15% MatSolve 0 0% 59.88% 618ms 4.15% PCApply_ICC 609ms 4.09% 63.97% 617ms 4.14% MatSolve_SeqSBAIJ_1_NaturalOrdering 1ms 0.0067% 63.97% 509ms 3.42% KSP_PCApply.lto_priv.7 57ms 0.38% 64.35% 437ms 2.93% H5S_mpio_space_type 346ms 2.32% 66.68% 346ms 2.32% log_inline (inline) 132ms 0.89% 67.56% 258ms 1.73% TimeStepper::TimeStepper 249ms 1.67% 69.24% 249ms 1.67% exp_inline (inline) 2ms 0.013% 69.25% 230ms 1.54% KSPConvergedDefault 23ms 0.15% 69.40% 203ms 1.36% H5VM_chunk_index 111ms 0.75% 70.15% 201ms 1.35% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 44ms 0.3% 70.44% 194ms 1.30% __GI___libc_malloc 108ms 0.73% 71.17% 191ms 1.28% top12 (inline) 185ms 1.24% 72.41% 185ms 1.24% std::isinf (inline) 141ms 0.95% 73.36% 173ms 1.16% _int_malloc 0 0% 73.36% 167ms 1.12% KSP_PCApply 140ms 0.94% 74.30% 161ms 1.08% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 30ms 0.2% 74.50% 157ms 1.05% AbstractCardiacCell::SetVoltage (partial-inline) 25ms 0.17% 74.67% 157ms 1.05% __GI___libc_free 156ms 1.05% 75.72% 156ms 1.05% [libchaste_heart.so] 116ms 0.78% 76.49% 150ms 1.01% AbstractOneStepIvpOdeSolver::Solve 7ms 0.047% 76.54% 147ms 0.99% ompi_datatype_create 0 0% 76.54% 145ms 0.97% Hdf5DataWriter::PutUnlimitedVariable 6ms 0.04% 76.58% 144ms 0.97% MPI_Type_free 9ms 0.06% 76.64% 142ms 0.95% ompi_datatype_destroy 141ms 0.95% 77.59% 141ms 0.95% ddot_ 60ms 0.4% 77.99% 132ms 0.89% _int_free 125ms 0.84% 78.83% 125ms 0.84% TimeStepper::CalculateNextTime 24ms 0.16% 78.99% 123ms 0.83% ompi_datatype_release_args 3ms 0.02% 79.01% 123ms 0.83% ompi_info_register_framework_params 71ms 0.48% 79.49% 121ms 0.81% H5S_hyper_add_span_element 11ms 0.074% 79.56% 116ms 0.78% H5S_set_version 3ms 0.02% 79.58% 116ms 0.78% ompi_datatype_duplicate 3ms 0.02% 79.60% 115ms 0.77% PMPI_Type_create_resized 0 0% 79.60% 111ms 0.75% VecDuplicate 5ms 0.034% 79.64% 111ms 0.75% VecDuplicate_MPI 108ms 0.73% 80.36% 108ms 0.73% __ieee754_log_fma 44ms 0.3% 80.66% 105ms 0.7% H5VM_array_calc 104ms 0.7% 81.35% 104ms 0.7% __memcpy_avx_unaligned_erms 1ms 0.0067% 81.36% 102ms 0.68% PMPI_File_set_view 3ms 0.02% 81.38% 98ms 0.66% VecTDot 38ms 0.26% 81.64% 98ms 0.66% std::__cxx11::basic_string::basic_string 1ms 0.0067% 81.64% 96ms 0.64% VecNorm 94ms 0.63% 82.27% 94ms 0.63% H5VM_array_offset_pre 86ms 0.58% 82.85% 92ms 0.62% AbstractParameterisedSystem::SetAnyVariable 0 0% 82.85% 92ms 0.62% VecTDot_Seq 3ms 0.02% 82.87% 92ms 0.62% VecXDot_Seq_Private.constprop.0 72ms 0.48% 83.36% 91ms 0.61% AbstractParameterisedSystem::GetAnyVariable 90ms 0.6% 83.96% 90ms 0.6% asuint64 (inline) 88ms 0.59% 84.55% 88ms 0.59% std::vector::operator[] (inline) 87ms 0.58% 85.13% 87ms 0.58% H5VM_chunk_index_scaled 0 0% 85.13% 87ms 0.58% VecNorm_Seq 56ms 0.38% 85.51% 85ms 0.57% TimeStepper::AdvanceOneTimeStep 84ms 0.56% 86.07% 84ms 0.56% [libm.so.6] 33ms 0.22% 86.30% 83ms 0.56% H5S_select_iter_next 43ms 0.29% 86.59% 77ms 0.52% AbstractCardiacCell::GetVoltage (partial-inline) 24ms 0.16% 86.75% 75ms 0.5% ompi_datatype_set_args