File: Test3dBidomainProblemForEfficiencyWithFasterOdes Type: cpu Showing nodes accounting for 3611ms, 89.43% of 4038ms total Dropped 357 nodes (cum <= 20.19ms) flat flat% sum% cum cum% 0 0% 0% 4028ms 99.75% __libc_start_call_main 0 0% 0% 4028ms 99.75% __libc_start_main_impl 0 0% 0% 4028ms 99.75% _start 0 0% 0% 4025ms 99.68% main 0 0% 0% 3990ms 98.81% Test3dBidomainProblemForEfficiencyWithFasterOdes::TestBidomain3d 0 0% 0% 3983ms 98.64% AbstractCardiacProblem::Solve 0 0% 0% 3975ms 98.44% AbstractDynamicLinearPdeSolver::Solve 1ms 0.025% 0.025% 2023ms 50.10% LinearSystem::Solve 0 0% 0.025% 1984ms 49.13% KSPSolve 7ms 0.17% 0.2% 1984ms 49.13% KSPSolve_Private 1ms 0.025% 0.22% 1954ms 48.39% KSPSolve_CG 15ms 0.37% 0.59% 1493ms 36.97% AbstractCardiacTissue::SolveCellSystems 4ms 0.099% 0.69% 1143ms 28.31% PCApply 4ms 0.099% 0.79% 1132ms 28.03% PCApply_BJacobi_Singleblock 34ms 0.84% 1.63% 1017ms 25.19% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 1.63% 985ms 24.39% KSPSolve_PREONLY (partial-inline) 1ms 0.025% 1.66% 939ms 23.25% MatSolve 0 0% 1.66% 939ms 23.25% PCApply_ICC 929ms 23.01% 24.67% 933ms 23.11% MatSolve_SeqSBAIJ_1_NaturalOrdering 4ms 0.099% 24.76% 908ms 22.49% MatMult 0 0% 24.76% 901ms 22.31% KSP_PCApply.lto_priv.7 228ms 5.65% 30.41% 898ms 22.24% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 3ms 0.074% 30.49% 894ms 22.14% MatMult_SeqAIJ 888ms 21.99% 52.48% 894ms 22.14% MatMult_SeqAIJ_Inode (inline) 48ms 1.19% 53.67% 420ms 10.40% BidomainSolver::SetupLinearSystem 228ms 5.65% 59.31% 405ms 10.03% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 221ms 5.47% 64.78% 392ms 9.71% CardiacNewtonSolver::Solve 0 0% 64.78% 323ms 8.00% KSP_PCApply (partial-inline) 2ms 0.05% 64.83% 321ms 7.95% KSPConvergedDefault 25ms 0.62% 65.45% 279ms 6.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 81ms 2.01% 67.46% 254ms 6.29% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::RegenerateTables 92ms 2.28% 69.74% 162ms 4.01% __GI___exp 146ms 3.62% 73.35% 149ms 3.69% __ieee754_log_fma 0 0% 73.35% 125ms 3.10% MatNullSpaceRemove 10ms 0.25% 73.60% 111ms 2.75% __pow 102ms 2.53% 76.13% 102ms 2.53% [libchaste_heart.so] 10ms 0.25% 76.37% 100ms 2.48% __ieee754_pow_fma 2ms 0.05% 76.42% 87ms 2.15% VecDuplicate 66ms 1.63% 78.06% 84ms 2.08% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 74ms 1.83% 79.89% 74ms 1.83% ddot_ 65ms 1.61% 81.50% 74ms 1.83% exp_inline (inline) 20ms 0.5% 82.00% 73ms 1.81% MPI_Wtime 0 0% 82.00% 72ms 1.78% VecMDot 4ms 0.099% 82.10% 72ms 1.78% VecMXDot_Private 45ms 1.11% 83.21% 70ms 1.73% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 60ms 1.49% 84.70% 60ms 1.49% __ieee754_exp_fma 2ms 0.05% 84.74% 59ms 1.46% VecTDot 5ms 0.12% 84.87% 53ms 1.31% VecMAXPY 1ms 0.025% 84.89% 53ms 1.31% __GI___clock_gettime 52ms 1.29% 86.18% 52ms 1.29% [[vdso]] 8ms 0.2% 86.38% 51ms 1.26% PetscLogEventEndDefault 0 0% 86.38% 48ms 1.19% VecTDot_Seq 0 0% 86.38% 48ms 1.19% VecXDot_Seq_Private.constprop.0 0 0% 86.38% 47ms 1.16% VecDuplicate_Seq 1ms 0.025% 86.40% 46ms 1.14% VecDestroy 43ms 1.06% 87.47% 46ms 1.14% VecMDot_Seq 1ms 0.025% 87.49% 44ms 1.09% VecNorm 2ms 0.05% 87.54% 38ms 0.94% VecDuplicate_MPI 3ms 0.074% 87.62% 37ms 0.92% PetscMallocA 36ms 0.89% 88.51% 37ms 0.92% VecMAXPY_Seq 5ms 0.12% 88.63% 36ms 0.89% PetscLogEventBeginDefault 10ms 0.25% 88.88% 35ms 0.87% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 88.88% 35ms 0.87% AbstractBidomainSolver::FinaliseLinearSystem 0 0% 88.88% 35ms 0.87% VecNorm_Seq 3ms 0.074% 88.95% 34ms 0.84% PetscMallocAlign 1ms 0.025% 88.98% 33ms 0.82% VecCreate 0 0% 88.98% 32ms 0.79% CxxTest::RealWorldDescription::setUp 0 0% 88.98% 32ms 0.79% PetscInitialize 0 0% 88.98% 32ms 0.79% PetscSetup::setUpWorld 0 0% 88.98% 32ms 0.79% PetscSetupUtils::CommonSetup 0 0% 88.98% 32ms 0.79% PetscSetupUtils::InitialisePetsc 0 0% 88.98% 31ms 0.77% PMPI_Init_thread 0 0% 88.98% 31ms 0.77% ompi_mpi_init 7ms 0.17% 89.15% 30ms 0.74% __GI___libc_malloc 1ms 0.025% 89.18% 29ms 0.72% 0 0% 89.18% 26ms 0.64% PetscHeaderDestroy_Private 3ms 0.074% 89.25% 26ms 0.64% VecCreate_MPI_Private 0 0% 89.25% 26ms 0.64% __posix_memalign 0 0% 89.25% 22ms 0.54% VecSetType 4ms 0.099% 89.35% 21ms 0.52% PMPI_Comm_get_attr 3ms 0.074% 89.43% 21ms 0.52% VecAXPY