File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12767ms, 86.07% of 14833ms total Dropped 710 nodes (cum <= 74.17ms) flat flat% sum% cum cum% 0 0% 0% 14825ms 99.95% __libc_start_call_main 0 0% 0% 14825ms 99.95% __libc_start_main_impl 0 0% 0% 14825ms 99.95% _start 0 0% 0% 14822ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14822ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14822ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14822ms 99.93% main 0 0% 0% 14789ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14789ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14789ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14767ms 99.56% AbstractCardiacProblem::Solve 2ms 0.013% 0.027% 11491ms 77.47% AbstractDynamicLinearPdeSolver::Solve 82ms 0.55% 0.58% 9179ms 61.88% AbstractCardiacTissue::SolveCellSystems 177ms 1.19% 1.77% 5637ms 38.00% AbstractCardiacCell::ComputeExceptVoltage 151ms 1.02% 2.79% 4791ms 32.30% AbstractOneStepIvpOdeSolver::InternalSolve 167ms 1.13% 3.92% 4083ms 27.53% EulerIvpOdeSolver::CalculateNextYValue 916ms 6.18% 10.09% 3852ms 25.97% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1682ms 11.34% 21.43% 3493ms 23.55% __GI___exp 2ms 0.013% 21.45% 3208ms 21.63% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.45% 3062ms 20.64% Hdf5DataWriter::PutVector 2ms 0.013% 21.47% 3036ms 20.47% H5Dwrite 2ms 0.013% 21.48% 3019ms 20.35% H5D__write 95ms 0.64% 22.12% 2664ms 17.96% AbstractCardiacTissue::UpdateCaches (inline) 869ms 5.86% 27.98% 2531ms 17.06% CellLuoRudy1991FromCellML::GetIIonic 3ms 0.02% 28.00% 1806ms 12.18% H5D__chunk_collective_write 14ms 0.094% 28.09% 1803ms 12.16% H5F_set_coll_metadata_reads 1560ms 10.52% 38.61% 1728ms 11.65% __ieee754_exp_fma 21ms 0.14% 38.75% 1630ms 10.99% H5FD_s3comms_uriencode 2ms 0.013% 38.76% 1557ms 10.50% LinearSystem::Solve 0 0% 38.76% 1414ms 9.53% KSPSolve 1ms 0.0067% 38.77% 1414ms 9.53% KSPSolve_Private 4ms 0.027% 38.80% 1398ms 9.42% KSPSolve_CG 2ms 0.013% 38.81% 1256ms 8.47% H5F_block_write 3ms 0.02% 38.83% 1254ms 8.45% H5PB_write 2ms 0.013% 38.85% 1251ms 8.43% H5F__accum_write 2ms 0.013% 38.86% 1249ms 8.42% H5FD_write 56ms 0.38% 39.24% 1247ms 8.41% 2ms 0.013% 39.25% 1158ms 7.81% H5D__mpio_select_write 9ms 0.061% 39.31% 1094ms 7.38% H5D__chunk_cacheable 4ms 0.027% 39.34% 1070ms 7.21% PMPI_File_write_at_all 1040ms 7.01% 46.35% 1044ms 7.04% __GI_pwritev64 406ms 2.74% 49.09% 941ms 6.34% H5S_select_iterate 6ms 0.04% 49.13% 870ms 5.87% std::pow (inline) 69ms 0.47% 49.59% 862ms 5.81% __pow 99ms 0.67% 50.26% 793ms 5.35% __ieee754_pow_fma 299ms 2.02% 52.28% 736ms 4.96% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 52.28% 724ms 4.88% PCApply 1ms 0.0067% 52.29% 717ms 4.83% PCApply_BJacobi_Singleblock 0 0% 52.29% 683ms 4.60% KSPSolve_PREONLY 1ms 0.0067% 52.30% 681ms 4.59% PCApply_ICC 0 0% 52.30% 680ms 4.58% MatSolve 670ms 4.52% 56.81% 680ms 4.58% MatSolve_SeqSBAIJ_1_NaturalOrdering 2ms 0.013% 56.83% 676ms 4.56% MatMult 670ms 4.52% 61.34% 674ms 4.54% MatMult_SeqAIJ 292ms 1.97% 63.31% 661ms 4.46% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 63.31% 555ms 3.74% KSP_PCApply.lto_priv.7 73ms 0.49% 63.80% 544ms 3.67% H5D__chunk_set_sizes 45ms 0.3% 64.11% 449ms 3.03% H5S_mpio_space_type 359ms 2.42% 66.53% 359ms 2.42% log_inline (inline) 300ms 2.02% 68.55% 301ms 2.03% exp_inline (inline) 135ms 0.91% 69.46% 275ms 1.85% TimeStepper::TimeStepper 2ms 0.013% 69.47% 232ms 1.56% KSPConvergedDefault 51ms 0.34% 69.82% 212ms 1.43% __GI___libc_malloc 115ms 0.78% 70.59% 202ms 1.36% top12 (inline) 149ms 1.00% 71.60% 192ms 1.29% AbstractOneStepIvpOdeSolver::Solve 161ms 1.09% 72.68% 192ms 1.29% _int_malloc 181ms 1.22% 73.90% 181ms 1.22% [libchaste_heart.so] 180ms 1.21% 75.12% 180ms 1.21% std::isinf (inline) 7ms 0.047% 75.16% 173ms 1.17% ompi_datatype_create 16ms 0.11% 75.27% 171ms 1.15% H5VM_chunk_index 1ms 0.0067% 75.28% 170ms 1.15% KSP_PCApply 131ms 0.88% 76.16% 158ms 1.07% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 28ms 0.19% 76.35% 155ms 1.04% AbstractCardiacCell::SetVoltage (partial-inline) 152ms 1.02% 77.37% 152ms 1.02% TimeStepper::CalculateNextTime 68ms 0.46% 77.83% 146ms 0.98% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 77.83% 144ms 0.97% Hdf5DataWriter::PutUnlimitedVariable 9ms 0.061% 77.89% 133ms 0.9% ompi_datatype_destroy 17ms 0.11% 78.01% 132ms 0.89% __GI___libc_free 132ms 0.89% 78.90% 132ms 0.89% ddot_ 7ms 0.047% 78.95% 128ms 0.86% MPI_Type_free 120ms 0.81% 79.75% 120ms 0.81% __ieee754_log_fma 2ms 0.013% 79.77% 116ms 0.78% PMPI_Type_create_resized 39ms 0.26% 80.03% 114ms 0.77% _int_free 15ms 0.1% 80.13% 113ms 0.76% H5S_set_version 2ms 0.013% 80.15% 113ms 0.76% VecDuplicate 5ms 0.034% 80.18% 111ms 0.75% VecDuplicate_MPI 111ms 0.75% 80.93% 111ms 0.75% __memcpy_avx_unaligned_erms 34ms 0.23% 81.16% 111ms 0.75% ompi_datatype_release_args 5ms 0.034% 81.19% 111ms 0.75% ompi_info_register_framework_params 4ms 0.027% 81.22% 101ms 0.68% ompi_datatype_duplicate 37ms 0.25% 81.47% 99ms 0.67% std::__cxx11::basic_string::basic_string 36ms 0.24% 81.71% 98ms 0.66% H5VM_array_calc 0 0% 81.71% 98ms 0.66% PMPI_File_set_view 87ms 0.59% 82.30% 96ms 0.65% AbstractParameterisedSystem::SetAnyVariable 80ms 0.54% 82.84% 95ms 0.64% AbstractParameterisedSystem::GetAnyVariable 95ms 0.64% 83.48% 95ms 0.64% std::vector::operator[] (inline) 4ms 0.027% 83.50% 92ms 0.62% VecNorm 88ms 0.59% 84.10% 88ms 0.59% asuint64 (inline) 38ms 0.26% 84.35% 86ms 0.58% AbstractCardiacCell::GetVoltage (partial-inline) 34ms 0.23% 84.58% 85ms 0.57% ompi_datatype_set_args 2ms 0.013% 84.60% 84ms 0.57% VecTDot 83ms 0.56% 85.15% 83ms 0.56% [libm.so.6] 82ms 0.55% 85.71% 82ms 0.55% H5VM_array_offset_pre 3ms 0.02% 85.73% 81ms 0.55% H5D__chunk_allocated 0 0% 85.73% 81ms 0.55% VecTDot_Seq 0 0% 85.73% 81ms 0.55% VecXDot_Seq_Private.constprop.0 42ms 0.28% 86.01% 79ms 0.53% H5S_hyper_add_span_element 0 0% 86.01% 78ms 0.53% VecNorm_Seq 1ms 0.0067% 86.02% 76ms 0.51% H5D__select_write 4ms 0.027% 86.04% 75ms 0.51% H5Dgather 4ms 0.027% 86.07% 75ms 0.51% MPI_Type_create_hindexed