File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 425ms, 87.45% of 486ms total Dropped 225 nodes (cum <= 2.43ms) flat flat% sum% cum cum% 0 0% 0% 476ms 97.94% __libc_start_call_main 0 0% 0% 476ms 97.94% __libc_start_main_impl 0 0% 0% 476ms 97.94% _start 0 0% 0% 473ms 97.33% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 473ms 97.33% CxxTest::TestRunner::runAllTests 0 0% 0% 473ms 97.33% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 473ms 97.33% main 0 0% 0% 431ms 88.68% CxxTest::RealTestDescription::run 0 0% 0% 431ms 88.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 431ms 88.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 431ms 88.68% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 431ms 88.68% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 427ms 87.86% AbstractCardiacProblem::Solve 0 0% 0% 424ms 87.24% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 380ms 78.19% LinearSystem::Solve 0 0% 0% 379ms 77.98% KSPSolve 1ms 0.21% 0.21% 379ms 77.98% KSPSolve_Private 0 0% 0.21% 378ms 77.78% KSPSolve_CG 0 0% 0.21% 221ms 45.47% KSP_PCApply.lto_priv.7 0 0% 0.21% 215ms 44.24% PCApply 0 0% 0.21% 215ms 44.24% PCApply_BJacobi_Singleblock 0 0% 0.21% 186ms 38.27% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 170ms 34.98% MatSolve 168ms 34.57% 34.77% 170ms 34.98% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 34.77% 170ms 34.98% PCApply_ICC 1ms 0.21% 34.98% 84ms 17.28% MatMult 0 0% 34.98% 83ms 17.08% MatMult_SeqAIJ 83ms 17.08% 52.06% 83ms 17.08% MatMult_SeqAIJ_Inode (inline) 59ms 12.14% 64.20% 59ms 12.14% ddot_ 0 0% 64.20% 39ms 8.02% CxxTest::RealWorldDescription::setUp 0 0% 64.20% 39ms 8.02% PetscSetup::setUpWorld 0 0% 64.20% 39ms 8.02% PetscSetupUtils::CommonSetup 0 0% 64.20% 38ms 7.82% PMPI_Init_thread 0 0% 64.20% 38ms 7.82% PetscInitialize 0 0% 64.20% 38ms 7.82% PetscSetupUtils::InitialisePetsc 0 0% 64.20% 38ms 7.82% ompi_mpi_init 0 0% 64.20% 37ms 7.61% VecTDot 0 0% 64.20% 37ms 7.61% VecTDot_Seq 0 0% 64.20% 37ms 7.61% VecXDot_Seq_Private.constprop.0 0 0% 64.20% 35ms 7.20% AbstractCardiacTissue::SolveCellSystems 0 0% 64.20% 32ms 6.58% MatNullSpaceRemove 0 0% 64.20% 31ms 6.38% 0 0% 64.20% 26ms 5.35% AbstractCardiacCell::ComputeExceptVoltage 0 0% 64.20% 24ms 4.94% orte_init 1ms 0.21% 64.40% 23ms 4.73% VecNorm 0 0% 64.40% 22ms 4.53% VecNorm_Seq 0 0% 64.40% 21ms 4.32% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 64.40% 21ms 4.32% __GI__dl_catch_exception 0 0% 64.40% 21ms 4.32% _dl_catch_error 0 0% 64.40% 21ms 4.32% _dlerror_run 0 0% 64.40% 20ms 4.12% VecMDot 1ms 0.21% 64.61% 20ms 4.12% VecMXDot_Private 1ms 0.21% 64.81% 19ms 3.91% EulerIvpOdeSolver::CalculateNextYValue 19ms 3.91% 68.72% 19ms 3.91% VecMDot_Seq 0 0% 68.72% 19ms 3.91% mca_base_framework_open 5ms 1.03% 69.75% 18ms 3.70% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.75% 18ms 3.70% mca_base_framework_register 0 0% 69.75% 18ms 3.70% opal_stackframe_output 0 0% 69.75% 17ms 3.50% KSP_PCApply (partial-inline) 0 0% 69.75% 17ms 3.50% ___dlopen 0 0% 69.75% 17ms 3.50% _dl_open 0 0% 69.75% 17ms 3.50% dlopen_doit 0 0% 69.75% 17ms 3.50% dlopen_implementation (inline) 0 0% 69.75% 17ms 3.50% mca_base_framework_components_register 0 0% 69.75% 16ms 3.29% dl_open_worker 0 0% 69.75% 15ms 3.09% mca_base_component_find 0 0% 69.75% 15ms 3.09% mca_base_component_repository_open 0 0% 69.75% 14ms 2.88% _dl_init 0 0% 69.75% 14ms 2.88% call_init (inline) 0 0% 69.75% 14ms 2.88% hwloc_topology_load 7ms 1.44% 71.19% 13ms 2.67% __GI___exp 0 0% 71.19% 13ms 2.67% hwloc_linux_get_tid_last_cpu_location 0 0% 71.19% 12ms 2.47% VecMAXPY 12ms 2.47% 73.66% 12ms 2.47% VecMAXPY_Seq 0 0% 73.66% 11ms 2.26% VecDuplicate 0 0% 73.66% 11ms 2.26% VecDuplicate_Seq 0 0% 73.66% 11ms 2.26% dl_open_worker_begin 0 0% 73.66% 9ms 1.85% _dl_start_user 0 0% 73.66% 8ms 1.65% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 73.66% 8ms 1.65% PetscMallocA 0 0% 73.66% 8ms 1.65% PetscMallocAlign (partial-inline) 0 0% 73.66% 8ms 1.65% VecAYPX 8ms 1.65% 75.31% 8ms 1.65% VecAYPX_Seq 1ms 0.21% 75.51% 7ms 1.44% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.21% 75.72% 7ms 1.44% VecAXPY 0 0% 75.72% 7ms 1.44% VecSetType 1ms 0.21% 75.93% 7ms 1.44% __GI___libc_malloc 1ms 0.21% 76.13% 7ms 1.44% _dl_map_object 1ms 0.21% 76.34% 7ms 1.44% boost::serialization::singleton::get_instance 0 0% 76.34% 7ms 1.44% mca_base_framework_components_open 0 0% 76.34% 6ms 1.23% BidomainSolver::SetupLinearSystem 0 0% 76.34% 6ms 1.23% VecAXPY_Seq 0 0% 76.34% 6ms 1.23% _dl_lookup_symbol_x 0 0% 76.34% 6ms 1.23% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 6ms 1.23% 77.57% 6ms 1.23% daxpy_ 0 0% 77.57% 6ms 1.23% mca_topo_base_dist_graph_neighbors_count 0 0% 77.57% 5ms 1.03% VecCreate 0 0% 77.57% 5ms 1.03% VecCreate_Seq 1ms 0.21% 77.78% 5ms 1.03% VecDestroy 5ms 1.03% 78.81% 5ms 1.03% __GI___clock_nanosleep 0 0% 78.81% 5ms 1.03% __GI___nanosleep 5ms 1.03% 79.84% 5ms 1.03% __ieee754_exp_fma 0 0% 79.84% 5ms 1.03% __posix_memalign 0 0% 79.84% 5ms 1.03% opal_hwloc_base_get_topology 0 0% 79.84% 5ms 1.03% orte_ess_base_proc_binding 0 0% 79.84% 5ms 1.03% usleep 0 0% 79.84% 4ms 0.82% AbstractCardiacProblem::Initialise 1ms 0.21% 80.04% 4ms 0.82% PetscHeaderDestroy_Private 0 0% 80.04% 4ms 0.82% PetscMemzero (inline) 4ms 0.82% 80.86% 4ms 0.82% __GI_munmap 0 0% 80.86% 4ms 0.82% __ieee754_pow_fma 4ms 0.82% 81.69% 4ms 0.82% __memcpy_avx_unaligned_erms 4ms 0.82% 82.51% 4ms 0.82% __memset_avx2_unaligned_erms 0 0% 82.51% 4ms 0.82% __pow 1ms 0.21% 82.72% 4ms 0.82% _dl_map_object_from_fd 0 0% 82.72% 4ms 0.82% _dl_open_relocate_one_object (inline) 0 0% 82.72% 4ms 0.82% _dl_relocate_object 4ms 0.82% 83.54% 4ms 0.82% do_lookup_x 0 0% 83.54% 4ms 0.82% elf_dynamic_do_Rela (inline) 0 0% 83.54% 4ms 0.82% elf_machine_rela (inline) 0 0% 83.54% 4ms 0.82% resolve_map (inline) 0 0% 83.54% 4ms 0.82% std::pow (inline) 0 0% 83.54% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 83.54% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 83.54% 3ms 0.62% PetscFinalize 0 0% 83.54% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 83.54% 3ms 0.62% PetscSetupUtils::CommonFinalize 0 0% 83.54% 3ms 0.62% XOpenDisplay 0 0% 83.54% 3ms 0.62% [hwloc_gl.so] 0 0% 83.54% 3ms 0.62% [hwloc_pci.so] 3ms 0.62% 84.16% 3ms 0.62% [libchaste_heart.so] 0 0% 84.16% 3ms 0.62% [libxcb.so.1.1.0] 0 0% 84.16% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 84.16% 3ms 0.62% _XConnectXCB 3ms 0.62% 84.77% 3ms 0.62% __GI___libc_read 0 0% 84.77% 3ms 0.62% __GI_exit 0 0% 84.77% 3ms 0.62% __cxa_finalize 0 0% 84.77% 3ms 0.62% __dlclose 3ms 0.62% 85.39% 3ms 0.62% __libc_openat64 0 0% 85.39% 3ms 0.62% __run_exit_handlers 3ms 0.62% 86.01% 3ms 0.62% __strcmp_avx2 0 0% 86.01% 3ms 0.62% _dl_call_fini 0 0% 86.01% 3ms 0.62% _dl_close 0 0% 86.01% 3ms 0.62% _dl_close_worker (inline) 0 0% 86.01% 3ms 0.62% _dl_fini 1ms 0.21% 86.21% 3ms 0.62% _dl_runtime_resolve_xsavec 0 0% 86.21% 3ms 0.62% _dl_unmap 0 0% 86.21% 3ms 0.62% _dl_unmap_segments (inline) 0 0% 86.21% 3ms 0.62% boost::archive::detail::pointer_oserializer::pointer_oserializer (inline) 0 0% 86.21% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 3ms 0.62% 86.83% 3ms 0.62% log_inline (inline) 0 0% 86.83% 3ms 0.62% mca_base_component_repository_release 0 0% 86.83% 3ms 0.62% ompi_mpi_finalize 0 0% 86.83% 3ms 0.62% tcache_get (inline) 3ms 0.62% 87.45% 3ms 0.62% tcache_get_n (inline) 0 0% 87.45% 3ms 0.62% xcb_connect_to_display_with_auth_info