File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 117765ms, 91.19% of 129146ms total Dropped 1189 nodes (cum <= 645.73ms) flat flat% sum% cum cum% 0 0% 0% 129134ms 100% __libc_start_call_main 0 0% 0% 129134ms 100% __libc_start_main_impl 0 0% 0% 129134ms 100% _start 0 0% 0% 129131ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 129131ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 129131ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 129131ms 100% main 0 0% 0% 129088ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 129087ms 100% AbstractConvergenceTester::Converge 0 0% 0% 129087ms 100% CxxTest::RealTestDescription::run 0 0% 0% 129087ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 129087ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 129087ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 3ms 0.0023% 0.0023% 127872ms 99.01% AbstractCardiacProblem::Solve 7ms 0.0054% 0.0077% 127010ms 98.35% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0031% 0.011% 69989ms 54.19% LinearSystem::Solve 3ms 0.0023% 0.013% 69437ms 53.77% KSPSolve 12ms 0.0093% 0.022% 69436ms 53.77% KSPSolve_Private 18ms 0.014% 0.036% 69038ms 53.46% KSPSolve_SYMMLQ 503ms 0.39% 0.43% 47577ms 36.84% AbstractCardiacTissue::SolveCellSystems 2ms 0.0015% 0.43% 40306ms 31.21% PCApply 5ms 0.0039% 0.43% 40291ms 31.20% PCApply_BJacobi_Singleblock 1ms 0.00077% 0.43% 37812ms 29.28% KSPSolve_PREONLY (partial-inline) 1100ms 0.85% 1.28% 37142ms 28.76% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0023% 1.29% 36603ms 28.34% PCApply_ICC 5ms 0.0039% 1.29% 36600ms 28.34% MatSolve 36094ms 27.95% 29.24% 36595ms 28.34% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 3ms 0.0023% 29.24% 34569ms 26.77% KSP_PCApply.lto_priv.18 7827ms 6.06% 35.30% 32592ms 25.24% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 7ms 0.0054% 35.31% 23358ms 18.09% MatMult 319ms 0.25% 35.55% 23351ms 18.08% MatMult_SeqAIJ (partial-inline) 22799ms 17.65% 53.21% 23346ms 18.08% MatMult_SeqAIJ_Inode (inline) 2221ms 1.72% 54.93% 16766ms 12.98% CardiacNewtonSolver::Solve 5567ms 4.31% 59.24% 9990ms 7.74% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1442ms 1.12% 60.35% 9470ms 7.33% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 203ms 0.16% 60.51% 8899ms 6.89% AbstractCardiacTissue::UpdateCaches (inline) 1720ms 1.33% 61.84% 8306ms 6.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1176ms 0.91% 62.75% 8237ms 6.38% BidomainSolver::SetupLinearSystem 1ms 0.00077% 62.75% 7758ms 6.01% KSP_PCApply (partial-inline) 7697ms 5.96% 68.71% 7697ms 5.96% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 8ms 0.0062% 68.72% 7121ms 5.51% KSPConvergedDefault 4138ms 3.20% 71.92% 4226ms 3.27% __ieee754_log_fma 0 0% 71.92% 4089ms 3.17% boost::numeric::ublas::norm_inf (inline) 2822ms 2.19% 74.11% 4089ms 3.17% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.11% 4089ms 3.17% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.11% 4089ms 3.17% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 8ms 0.0062% 74.12% 3481ms 2.70% MatNullSpaceRemove 2098ms 1.62% 75.74% 3231ms 2.50% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 3190ms 2.47% 78.21% 3190ms 2.47% ddot_ 27ms 0.021% 78.23% 3153ms 2.44% std::pow (inline) 397ms 0.31% 78.54% 3114ms 2.41% __pow 2934ms 2.27% 80.81% 2934ms 2.27% __memcpy_avx_unaligned_erms 0 0% 80.81% 2898ms 2.24% PetscMemcpy (inline) 4ms 0.0031% 80.81% 2738ms 2.12% VecDot 1ms 0.00077% 80.81% 2734ms 2.12% VecDot_Seq 4ms 0.0031% 80.82% 2733ms 2.12% VecXDot_Seq_Private.constprop.0 346ms 0.27% 81.09% 2686ms 2.08% __ieee754_pow_fma 18ms 0.014% 81.10% 2432ms 1.88% VecCopy 3ms 0.0023% 81.10% 2408ms 1.86% VecCopy_Seq (partial-inline) 13ms 0.01% 81.11% 2219ms 1.72% VecAXPY 6ms 0.0046% 81.12% 2206ms 1.71% VecAXPY_Seq 7ms 0.0054% 81.12% 2191ms 1.70% VecMDot 2188ms 1.69% 82.82% 2188ms 1.69% daxpy_ 15ms 0.012% 82.83% 2184ms 1.69% VecMXDot_Private 2157ms 1.67% 84.50% 2164ms 1.68% VecMDot_Seq 2ms 0.0015% 84.50% 2012ms 1.56% AbstractFeVolumeIntegralAssembler::DoAssemble 23ms 0.018% 84.52% 1686ms 1.31% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1523ms 1.18% 85.70% 1575ms 1.22% exp_inline (inline) 0 0% 85.70% 1401ms 1.08% AbstractFeAssemblerInterface::AssembleMatrix (inline) 6ms 0.0046% 85.70% 1282ms 0.99% VecMAXPY 1269ms 0.98% 86.68% 1276ms 0.99% VecMAXPY_Seq 0 0% 86.68% 1262ms 0.98% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.68% 1262ms 0.98% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.68% 1262ms 0.98% boost_numeric_ublas_abs (inline) 1262ms 0.98% 87.66% 1262ms 0.98% std::abs (inline) 4ms 0.0031% 87.66% 1109ms 0.86% boost::numeric::ublas::matrix_assign (inline) 225ms 0.17% 87.84% 1097ms 0.85% boost::numeric::ublas::indexing_matrix_assign 1047ms 0.81% 88.65% 1047ms 0.81% [libchaste_heart.so] 0 0% 88.65% 1038ms 0.8% CuboidMeshConstructor::Construct 0 0% 88.65% 1037ms 0.8% AbstractTetrahedralMesh::ConstructRegularSlabMesh 4ms 0.0031% 88.65% 1037ms 0.8% DistributedTetrahedralMesh::ConstructCuboid 679ms 0.53% 89.18% 1034ms 0.8% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 3ms 0.0023% 89.18% 925ms 0.72% Element::Element 3ms 0.0023% 89.18% 902ms 0.7% AbstractTetrahedralElement::CalculateJacobian 5ms 0.0039% 89.19% 880ms 0.68% BidomainAssembler::ComputeMatrixTerm 5ms 0.0039% 89.19% 851ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 3ms 0.0023% 89.19% 841ms 0.65% AbstractTetrahedralElement::AbstractTetrahedralElement 3ms 0.0023% 89.20% 831ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 228ms 0.18% 89.37% 827ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 7ms 0.0054% 89.38% 818ms 0.63% VecScale 0 0% 89.38% 815ms 0.63% VecDuplicate 3ms 0.0023% 89.38% 811ms 0.63% VecScale_Seq 801ms 0.62% 90.00% 801ms 0.62% dscal_ 794ms 0.61% 90.61% 794ms 0.61% __memset_avx2_unaligned_erms 5ms 0.0039% 90.62% 792ms 0.61% BidomainProblem::WriteOneStep 0 0% 90.62% 785ms 0.61% PetscMemzero (inline) 3ms 0.0023% 90.62% 770ms 0.6% VecNorm 2ms 0.0015% 90.62% 760ms 0.59% VecNorm_Seq 730ms 0.57% 91.19% 730ms 0.57% log_inline (inline)