File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12827ms, 85.17% of 15061ms total Dropped 791 nodes (cum <= 75.31ms) flat flat% sum% cum cum% 0 0% 0% 15049ms 99.92% __libc_start_call_main 0 0% 0% 15049ms 99.92% __libc_start_main_impl 0 0% 0% 15049ms 99.92% _start 0 0% 0% 15046ms 99.90% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 15046ms 99.90% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 15046ms 99.90% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 15046ms 99.90% main 0 0% 0% 15001ms 99.60% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 15001ms 99.60% CxxTest::TestRunner::runTest (inline) 0 0% 0% 15001ms 99.60% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14976ms 99.44% AbstractCardiacProblem::Solve 3ms 0.02% 0.033% 11427ms 75.87% AbstractDynamicLinearPdeSolver::Solve 76ms 0.5% 0.54% 9135ms 60.65% AbstractCardiacTissue::SolveCellSystems 98ms 0.65% 1.19% 5468ms 36.31% AbstractCardiacCell::ComputeExceptVoltage 120ms 0.8% 1.99% 4823ms 32.02% AbstractOneStepIvpOdeSolver::InternalSolve 152ms 1.01% 2.99% 4132ms 27.44% EulerIvpOdeSolver::CalculateNextYValue 902ms 5.99% 8.98% 3931ms 26.10% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1834ms 12.18% 21.16% 3610ms 23.97% __GI___exp 4ms 0.027% 21.19% 3489ms 23.17% MonodomainProblem::WriteOneStep 2ms 0.013% 21.20% 3322ms 22.06% Hdf5DataWriter::PutVector 1ms 0.0066% 21.21% 3292ms 21.86% H5Dwrite 3ms 0.02% 21.23% 3270ms 21.71% H5D__write 101ms 0.67% 21.90% 2973ms 19.74% AbstractCardiacTissue::UpdateCaches (inline) 880ms 5.84% 27.74% 2790ms 18.52% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 27.75% 1859ms 12.34% H5D__chunk_collective_write 16ms 0.11% 27.86% 1857ms 12.33% H5F_set_coll_metadata_reads 1381ms 9.17% 37.03% 1705ms 11.32% __ieee754_exp_fma 24ms 0.16% 37.19% 1659ms 11.02% H5FD_s3comms_uriencode 1ms 0.0066% 37.20% 1549ms 10.28% LinearSystem::Solve 1ms 0.0066% 37.20% 1440ms 9.56% KSPSolve 3ms 0.02% 37.22% 1439ms 9.55% KSPSolve_Private 3ms 0.02% 37.24% 1426ms 9.47% KSPSolve_CG 5ms 0.033% 37.28% 1293ms 8.59% H5D__chunk_cacheable 60ms 0.4% 37.67% 1266ms 8.41% 0 0% 37.67% 1253ms 8.32% H5F_block_write 1ms 0.0066% 37.68% 1253ms 8.32% H5PB_write 2ms 0.013% 37.69% 1252ms 8.31% H5FD_write 0 0% 37.69% 1252ms 8.31% H5F__accum_write 1ms 0.0066% 37.70% 1155ms 7.67% H5D__mpio_select_write 371ms 2.46% 40.16% 1138ms 7.56% H5S_select_iterate 1ms 0.0066% 40.17% 1043ms 6.93% PMPI_File_write_at_all 1ms 0.0066% 40.18% 1032ms 6.85% std::pow (inline) 116ms 0.77% 40.95% 1031ms 6.85% __pow 1003ms 6.66% 47.61% 1007ms 6.69% __GI_pwritev64 87ms 0.58% 48.18% 914ms 6.07% __ieee754_pow_fma 1ms 0.0066% 48.19% 800ms 5.31% PCApply 1ms 0.0066% 48.20% 791ms 5.25% PCApply_BJacobi_Singleblock 76ms 0.5% 48.70% 777ms 5.16% H5D__chunk_set_sizes 0 0% 48.70% 762ms 5.06% KSPSolve_PREONLY 1ms 0.0066% 48.71% 759ms 5.04% PCApply_ICC 4ms 0.027% 48.74% 758ms 5.03% MatSolve 750ms 4.98% 53.71% 754ms 5.01% MatSolve_SeqSBAIJ_1_NaturalOrdering 307ms 2.04% 55.75% 724ms 4.81% MonodomainSolver::SetupLinearSystem 2ms 0.013% 55.77% 557ms 3.70% MatMult 555ms 3.69% 59.45% 555ms 3.69% MatMult_SeqAIJ 1ms 0.0066% 59.46% 548ms 3.64% KSP_PCApply.lto_priv.7 78ms 0.52% 59.98% 518ms 3.44% H5S_mpio_space_type 453ms 3.01% 62.98% 453ms 3.01% log_inline (inline) 214ms 1.42% 64.40% 435ms 2.89% CellLuoRudy1991FromCellML::VerifyStateVariables 328ms 2.18% 66.58% 341ms 2.26% exp_inline (inline) 2ms 0.013% 66.60% 329ms 2.18% KSPConvergedDefault 136ms 0.9% 67.50% 278ms 1.85% TimeStepper::TimeStepper 221ms 1.47% 68.97% 265ms 1.76% top12 (inline) 1ms 0.0066% 68.97% 254ms 1.69% KSP_PCApply 16ms 0.11% 69.08% 253ms 1.68% H5VM_chunk_index 243ms 1.61% 70.69% 243ms 1.61% [libchaste_heart.so] 59ms 0.39% 71.08% 236ms 1.57% __GI___libc_malloc 168ms 1.12% 72.20% 212ms 1.41% _int_malloc 55ms 0.37% 72.56% 187ms 1.24% AbstractCardiacCell::SetVoltage (partial-inline) 12ms 0.08% 72.64% 183ms 1.22% MPI_Type_free 7ms 0.046% 72.69% 181ms 1.20% ompi_datatype_create 180ms 1.20% 73.89% 180ms 1.20% ddot_ 12ms 0.08% 73.97% 177ms 1.18% ompi_datatype_destroy 32ms 0.21% 74.18% 165ms 1.10% __GI___libc_free 5ms 0.033% 74.21% 162ms 1.08% Hdf5DataWriter::PutUnlimitedVariable 37ms 0.25% 74.46% 159ms 1.06% H5S_set_version 76ms 0.5% 74.96% 154ms 1.02% H5S_hyper_add_span_element 11ms 0.073% 75.03% 154ms 1.02% ompi_info_register_framework_params 41ms 0.27% 75.31% 153ms 1.02% ompi_datatype_release_args 126ms 0.84% 76.14% 151ms 1.00% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 149ms 0.99% 77.13% 149ms 0.99% asuint64 (inline) 143ms 0.95% 78.08% 143ms 0.95% TimeStepper::CalculateNextTime 100ms 0.66% 78.75% 140ms 0.93% AbstractOneStepIvpOdeSolver::Solve 136ms 0.9% 79.65% 136ms 0.9% H5VM_chunk_index_scaled 45ms 0.3% 79.95% 133ms 0.88% _int_free 0 0% 79.95% 132ms 0.88% PMPI_File_set_view 51ms 0.34% 80.29% 122ms 0.81% H5VM_array_calc 3ms 0.02% 80.31% 118ms 0.78% PMPI_Type_create_resized 114ms 0.76% 81.06% 114ms 0.76% __memcpy_avx_unaligned_erms 2ms 0.013% 81.08% 110ms 0.73% VecNorm 2ms 0.013% 81.09% 110ms 0.73% ompi_datatype_duplicate 109ms 0.72% 81.81% 109ms 0.72% __ieee754_log_fma 83ms 0.55% 82.37% 107ms 0.71% AbstractParameterisedSystem::SetAnyVariable 44ms 0.29% 82.66% 106ms 0.7% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 82.66% 104ms 0.69% VecNorm_Seq 102ms 0.68% 83.33% 102ms 0.68% H5VM_array_offset_pre 0 0% 83.33% 101ms 0.67% VecTDot 0 0% 83.33% 100ms 0.66% VecTDot_Seq 0 0% 83.33% 100ms 0.66% VecXDot_Seq_Private.constprop.0 81ms 0.54% 83.87% 94ms 0.62% AbstractParameterisedSystem::GetAnyVariable 0 0% 83.87% 91ms 0.6% VecDuplicate 2ms 0.013% 83.89% 91ms 0.6% VecDuplicate_MPI 88ms 0.58% 84.47% 88ms 0.58% std::isinf (inline) 4ms 0.027% 84.50% 84ms 0.56% MPI_Type_create_hindexed 41ms 0.27% 84.77% 83ms 0.55% H5S_select_iter_next 2ms 0.013% 84.78% 80ms 0.53% H5Pcreate 22ms 0.15% 84.93% 79ms 0.52% __libc_calloc 0 0% 84.93% 79ms 0.52% std::vector::_M_assign_aux (inline) 0 0% 84.93% 79ms 0.52% std::vector::assign (inline) 23ms 0.15% 85.08% 78ms 0.52% ompi_datatype_set_args 0 0% 85.08% 77ms 0.51% H5D__chunk_allocated 7ms 0.046% 85.13% 77ms 0.51% H5P_create_id 6ms 0.04% 85.17% 76ms 0.5% opal_datatype_create_desc