File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 425ms, 87.63% of 485ms total Dropped 220 nodes (cum <= 2.42ms) flat flat% sum% cum cum% 0 0% 0% 475ms 97.94% __libc_start_call_main 0 0% 0% 475ms 97.94% __libc_start_main_impl 0 0% 0% 475ms 97.94% _start 0 0% 0% 472ms 97.32% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 472ms 97.32% CxxTest::TestRunner::runAllTests 0 0% 0% 472ms 97.32% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 472ms 97.32% main 0 0% 0% 432ms 89.07% CxxTest::RealTestDescription::run 0 0% 0% 432ms 89.07% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 432ms 89.07% CxxTest::TestRunner::runTest (inline) 0 0% 0% 432ms 89.07% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 432ms 89.07% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 427ms 88.04% AbstractCardiacProblem::Solve 0 0% 0% 425ms 87.63% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 380ms 78.35% LinearSystem::Solve 0 0% 0% 377ms 77.73% KSPSolve 0 0% 0% 377ms 77.73% KSPSolve_CG 0 0% 0% 377ms 77.73% KSPSolve_Private 0 0% 0% 207ms 42.68% KSP_PCApply.lto_priv.7 0 0% 0% 196ms 40.41% PCApply 1ms 0.21% 0.21% 196ms 40.41% PCApply_BJacobi_Singleblock 0 0% 0.21% 176ms 36.29% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 164ms 33.81% MatSolve 162ms 33.40% 33.61% 164ms 33.81% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 33.61% 164ms 33.81% PCApply_ICC 1ms 0.21% 33.81% 74ms 15.26% MatMult 0 0% 33.81% 73ms 15.05% MatMult_SeqAIJ 73ms 15.05% 48.87% 73ms 15.05% MatMult_SeqAIJ_Inode (inline) 70ms 14.43% 63.30% 70ms 14.43% ddot_ 1ms 0.21% 63.51% 49ms 10.10% VecTDot 0 0% 63.51% 48ms 9.90% VecTDot_Seq 0 0% 63.51% 48ms 9.90% VecXDot_Seq_Private.constprop.0 0 0% 63.51% 38ms 7.84% AbstractCardiacTissue::SolveCellSystems 0 0% 63.51% 36ms 7.42% CxxTest::RealWorldDescription::setUp 0 0% 63.51% 36ms 7.42% PetscInitialize 0 0% 63.51% 36ms 7.42% PetscSetup::setUpWorld 0 0% 63.51% 36ms 7.42% PetscSetupUtils::CommonSetup 0 0% 63.51% 36ms 7.42% PetscSetupUtils::InitialisePetsc 0 0% 63.51% 35ms 7.22% PMPI_Init_thread 0 0% 63.51% 35ms 7.22% ompi_mpi_init 0 0% 63.51% 33ms 6.80% 0 0% 63.51% 30ms 6.19% MatNullSpaceRemove 0 0% 63.51% 25ms 5.15% AbstractCardiacCell::ComputeExceptVoltage 0 0% 63.51% 25ms 5.15% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.21% 63.71% 24ms 4.95% VecNorm 0 0% 63.71% 23ms 4.74% VecNorm_Seq 0 0% 63.71% 23ms 4.74% orte_init 2ms 0.41% 64.12% 18ms 3.71% EulerIvpOdeSolver::CalculateNextYValue 0 0% 64.12% 18ms 3.71% VecMDot 1ms 0.21% 64.33% 18ms 3.71% VecMXDot_Private 17ms 3.51% 67.84% 17ms 3.51% VecMDot_Seq 7ms 1.44% 69.28% 16ms 3.30% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.28% 16ms 3.30% VecAYPX 16ms 3.30% 72.58% 16ms 3.30% VecAYPX_Seq 0 0% 72.58% 16ms 3.30% __GI__dl_catch_exception 0 0% 72.58% 16ms 3.30% _dl_catch_error 0 0% 72.58% 16ms 3.30% _dlerror_run 0 0% 72.58% 15ms 3.09% opal_stackframe_output 0 0% 72.58% 14ms 2.89% KSP_PCApply (partial-inline) 0 0% 72.58% 14ms 2.89% hwloc_topology_load 0 0% 72.58% 14ms 2.89% mca_base_framework_open 4ms 0.82% 73.40% 13ms 2.68% __GI___exp 0 0% 73.40% 13ms 2.68% hwloc_linux_get_tid_last_cpu_location 0 0% 73.40% 12ms 2.47% VecMAXPY 12ms 2.47% 75.88% 12ms 2.47% VecMAXPY_Seq 0 0% 75.88% 12ms 2.47% mca_base_framework_register 0 0% 75.88% 11ms 2.27% _dl_init 0 0% 75.88% 11ms 2.27% call_init (inline) 0 0% 75.88% 10ms 2.06% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.21% 76.08% 10ms 2.06% CellLuoRudy1991FromCellML::GetIIonic 0 0% 76.08% 10ms 2.06% ___dlopen 0 0% 76.08% 10ms 2.06% _dl_open 0 0% 76.08% 10ms 2.06% dl_open_worker 0 0% 76.08% 10ms 2.06% dlopen_doit 0 0% 76.08% 10ms 2.06% dlopen_implementation (inline) 0 0% 76.08% 10ms 2.06% mca_base_framework_components_register 4ms 0.82% 76.91% 9ms 1.86% __GI___libc_malloc 9ms 1.86% 78.76% 9ms 1.86% __ieee754_exp_fma 0 0% 78.76% 9ms 1.86% mca_base_component_find 0 0% 78.76% 9ms 1.86% mca_base_component_repository_open 0 0% 78.76% 8ms 1.65% VecDuplicate 0 0% 78.76% 8ms 1.65% _dl_start_user 2ms 0.41% 79.18% 7ms 1.44% BidomainSolver::SetupLinearSystem 0 0% 79.18% 7ms 1.44% VecDuplicate_Seq 0 0% 79.18% 7ms 1.44% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 79.18% 7ms 1.44% boost::serialization::singleton::get_instance 1ms 0.21% 79.38% 7ms 1.44% dl_open_worker_begin 0 0% 79.38% 6ms 1.24% __dlclose 0 0% 79.38% 6ms 1.24% _dl_close 1ms 0.21% 79.59% 6ms 1.24% _dl_close_worker (inline) 0 0% 79.59% 6ms 1.24% _dl_lookup_symbol_x 0 0% 79.59% 6ms 1.24% mca_base_component_repository_release 0 0% 79.59% 6ms 1.24% mca_base_framework_components_open 1ms 0.21% 79.79% 5ms 1.03% VecAXPY 2ms 0.41% 80.21% 5ms 1.03% __cxa_finalize 5ms 1.03% 81.24% 5ms 1.03% __memcpy_avx_unaligned_erms 0 0% 81.24% 5ms 1.03% _dl_call_fini 2ms 0.41% 81.65% 5ms 1.03% _dl_fixup 0 0% 81.65% 5ms 1.03% _dl_runtime_resolve_xsavec 0 0% 81.65% 5ms 1.03% mca_base_components_close 0 0% 81.65% 5ms 1.03% mca_topo_base_dist_graph_neighbors_count 0 0% 81.65% 5ms 1.03% opal_hwloc_base_get_topology 0 0% 81.65% 5ms 1.03% orte_ess_base_proc_binding 0 0% 81.65% 4ms 0.82% AbstractCardiacProblem::Initialise 0 0% 81.65% 4ms 0.82% CxxTest::RealWorldDescription::tearDown 0 0% 81.65% 4ms 0.82% PetscFinalize 1ms 0.21% 81.86% 4ms 0.82% PetscMallocA 0 0% 81.86% 4ms 0.82% PetscMemcpy (inline) 0 0% 81.86% 4ms 0.82% PetscSetup::tearDownWorld 0 0% 81.86% 4ms 0.82% PetscSetupUtils::CommonFinalize 0 0% 81.86% 4ms 0.82% VecAXPY_Seq 0 0% 81.86% 4ms 0.82% VecDestroy 4ms 0.82% 82.68% 4ms 0.82% __GI___libc_read 4ms 0.82% 83.51% 4ms 0.82% __libc_openat64 1ms 0.21% 83.71% 4ms 0.82% __pow 4ms 0.82% 84.54% 4ms 0.82% __strcmp_avx2 2ms 0.41% 84.95% 4ms 0.82% _int_malloc 0 0% 84.95% 4ms 0.82% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 84.95% 4ms 0.82% boost::serialization::void_cast_detail::void_caster::recursive_register 4ms 0.82% 85.77% 4ms 0.82% do_lookup_x 0 0% 85.77% 4ms 0.82% ompi_mpi_finalize 0 0% 85.77% 4ms 0.82% std::pow (inline) 0 0% 85.77% 3ms 0.62% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 85.77% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 85.77% 3ms 0.62% PetscMallocAlign 1ms 0.21% 85.98% 3ms 0.62% TimeStepper::TimeStepper 0 0% 85.98% 3ms 0.62% VecCreate 1ms 0.21% 86.19% 3ms 0.62% VecSetType 0 0% 86.19% 3ms 0.62% XOpenDisplay 0 0% 86.19% 3ms 0.62% [hwloc_gl.so] 0 0% 86.19% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 86.19% 3ms 0.62% _XConnectXCB 0 0% 86.19% 3ms 0.62% __GI_exit 3ms 0.62% 86.80% 3ms 0.62% __GI_munmap 0 0% 86.80% 3ms 0.62% __ieee754_pow_fma 0 0% 86.80% 3ms 0.62% __posix_memalign 0 0% 86.80% 3ms 0.62% __run_exit_handlers 0 0% 86.80% 3ms 0.62% _dl_fini 0 0% 86.80% 3ms 0.62% _dl_map_object 0 0% 86.80% 3ms 0.62% _dl_map_object_from_fd 0 0% 86.80% 3ms 0.62% _dl_open_relocate_one_object (inline) 0 0% 86.80% 3ms 0.62% _dl_relocate_object 0 0% 86.80% 3ms 0.62% _dl_unmap 0 0% 86.80% 3ms 0.62% _dl_unmap_segments (inline) 0 0% 86.80% 3ms 0.62% boost::archive::detail::pointer_oserializer::pointer_oserializer (inline) 1ms 0.21% 87.01% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.01% 3ms 0.62% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 3ms 0.62% 87.63% 3ms 0.62% daxpy_ 0 0% 87.63% 3ms 0.62% elf_dynamic_do_Rela (inline) 0 0% 87.63% 3ms 0.62% elf_machine_rela (inline) 0 0% 87.63% 3ms 0.62% mca_base_framework_close 0 0% 87.63% 3ms 0.62% mca_base_var_group_register 0 0% 87.63% 3ms 0.62% mca_base_var_register 0 0% 87.63% 3ms 0.62% resolve_map (inline) 0 0% 87.63% 3ms 0.62% xcb_connect_to_display_with_auth_info