File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 120961ms, 91.66% of 131962ms total Dropped 1142 nodes (cum <= 659.81ms) flat flat% sum% cum cum% 0 0% 0% 131947ms 100% __libc_start_call_main 0 0% 0% 131947ms 100% __libc_start_main_impl 0 0% 0% 131947ms 100% _start 0 0% 0% 131944ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 131944ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 131944ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 131944ms 100% main 0 0% 0% 131903ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 131903ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 131902ms 100% AbstractConvergenceTester::Converge 0 0% 0% 131902ms 100% CxxTest::RealTestDescription::run 0 0% 0% 131902ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 131902ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 2ms 0.0015% 0.0015% 130715ms 99.06% AbstractCardiacProblem::Solve 8ms 0.0061% 0.0076% 129911ms 98.45% AbstractDynamicLinearPdeSolver::Solve 2ms 0.0015% 0.0091% 72628ms 55.04% LinearSystem::Solve 0 0% 0.0091% 72025ms 54.58% KSPSolve 8ms 0.0061% 0.015% 72025ms 54.58% KSPSolve_Private 16ms 0.012% 0.027% 71645ms 54.29% KSPSolve_SYMMLQ 486ms 0.37% 0.4% 47531ms 36.02% AbstractCardiacTissue::SolveCellSystems 12ms 0.0091% 0.4% 40498ms 30.69% PCApply 9ms 0.0068% 0.41% 40477ms 30.67% PCApply_BJacobi_Singleblock 1ms 0.00076% 0.41% 37955ms 28.76% KSPSolve_PREONLY (partial-inline) 1003ms 0.76% 1.17% 37184ms 28.18% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 6ms 0.0045% 1.18% 36986ms 28.03% PCApply_ICC 5ms 0.0038% 1.18% 36980ms 28.02% MatSolve 36475ms 27.64% 28.82% 36975ms 28.02% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0015% 28.82% 34632ms 26.24% KSP_PCApply.lto_priv.18 7886ms 5.98% 34.80% 32770ms 24.83% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0061% 34.80% 25596ms 19.40% MatMult 4123ms 3.12% 37.93% 25588ms 19.39% MatMult_SeqAIJ (partial-inline) 21268ms 16.12% 54.05% 21773ms 16.50% MatMult_SeqAIJ_Inode (inline) 2246ms 1.70% 55.75% 16745ms 12.69% CardiacNewtonSolver::Solve 5489ms 4.16% 59.91% 10028ms 7.60% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1501ms 1.14% 61.04% 9735ms 7.38% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 221ms 0.17% 61.21% 8974ms 6.80% AbstractCardiacTissue::UpdateCaches (inline) 1169ms 0.89% 62.10% 8536ms 6.47% BidomainSolver::SetupLinearSystem 1653ms 1.25% 63.35% 8413ms 6.38% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 7924ms 6.00% 69.36% 7924ms 6.00% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 2ms 0.0015% 69.36% 7558ms 5.73% KSP_PCApply (partial-inline) 5ms 0.0038% 69.36% 7168ms 5.43% KSPConvergedDefault 4271ms 3.24% 72.60% 4357ms 3.30% __ieee754_log_fma 0 0% 72.60% 4038ms 3.06% boost::numeric::ublas::norm_inf (inline) 2792ms 2.12% 74.71% 4038ms 3.06% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.71% 4038ms 3.06% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.71% 4038ms 3.06% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3539ms 2.68% 77.40% 3539ms 2.68% ddot_ 4ms 0.003% 77.40% 3211ms 2.43% MatNullSpaceRemove 25ms 0.019% 77.42% 3211ms 2.43% std::pow (inline) 2069ms 1.57% 78.98% 3202ms 2.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 354ms 0.27% 79.25% 3166ms 2.40% __pow 4ms 0.003% 79.26% 2984ms 2.26% VecDot 1ms 0.00076% 79.26% 2980ms 2.26% VecDot_Seq 3ms 0.0023% 79.26% 2979ms 2.26% VecXDot_Seq_Private.constprop.0 2890ms 2.19% 81.45% 2890ms 2.19% __memcpy_avx_unaligned_erms 0 0% 81.45% 2851ms 2.16% PetscMemcpy (inline) 388ms 0.29% 81.74% 2781ms 2.11% __ieee754_pow_fma 20ms 0.015% 81.76% 2516ms 1.91% VecAXPY 4ms 0.003% 81.76% 2496ms 1.89% VecAXPY_Seq 2475ms 1.88% 83.64% 2475ms 1.88% daxpy_ 19ms 0.014% 83.65% 2377ms 1.80% VecCopy 2ms 0.0015% 83.65% 2356ms 1.79% VecCopy_Seq (partial-inline) 2ms 0.0015% 83.65% 2066ms 1.57% VecMDot 5ms 0.0038% 83.66% 2064ms 1.56% VecMXDot_Private 2047ms 1.55% 85.21% 2056ms 1.56% VecMDot_Seq 1ms 0.00076% 85.21% 2004ms 1.52% AbstractFeVolumeIntegralAssembler::DoAssemble 20ms 0.015% 85.23% 1659ms 1.26% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1548ms 1.17% 86.40% 1594ms 1.21% exp_inline (inline) 0 0% 86.40% 1389ms 1.05% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.40% 1240ms 0.94% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.40% 1240ms 0.94% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.40% 1240ms 0.94% boost_numeric_ublas_abs (inline) 1240ms 0.94% 87.34% 1240ms 0.94% std::abs (inline) 6ms 0.0045% 87.34% 1141ms 0.86% VecMAXPY 1130ms 0.86% 88.20% 1135ms 0.86% VecMAXPY_Seq 3ms 0.0023% 88.20% 1104ms 0.84% boost::numeric::ublas::matrix_assign (inline) 236ms 0.18% 88.38% 1097ms 0.83% boost::numeric::ublas::indexing_matrix_assign 672ms 0.51% 88.89% 1040ms 0.79% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.89% 1014ms 0.77% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.89% 1014ms 0.77% CuboidMeshConstructor::Construct 1ms 0.00076% 88.89% 1014ms 0.77% DistributedTetrahedralMesh::ConstructCuboid 939ms 0.71% 89.60% 939ms 0.71% [libchaste_heart.so] 1ms 0.00076% 89.60% 908ms 0.69% AbstractTetrahedralElement::CalculateJacobian 9ms 0.0068% 89.61% 902ms 0.68% VecScale 1ms 0.00076% 89.61% 901ms 0.68% Element::Element 2ms 0.0015% 89.61% 896ms 0.68% VecNorm 6ms 0.0045% 89.62% 893ms 0.68% BidomainAssembler::ComputeMatrixTerm 2ms 0.0015% 89.62% 893ms 0.68% VecScale_Seq 888ms 0.67% 90.29% 888ms 0.67% dscal_ 2ms 0.0015% 90.29% 884ms 0.67% VecNorm_Seq 6ms 0.0045% 90.30% 873ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.0015% 90.30% 861ms 0.65% AbstractBidomainSolver::FinaliseLinearSystem 229ms 0.17% 90.47% 858ms 0.65% AbstractBidomainSolver::CheckCompatibilityCondition 1ms 0.00076% 90.47% 847ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 810ms 0.61% 91.09% 810ms 0.61% __memset_avx2_unaligned_erms 0 0% 91.09% 794ms 0.6% PetscMemzero (inline) 760ms 0.58% 91.66% 760ms 0.58% log_inline (inline) 1ms 0.00076% 91.66% 750ms 0.57% BidomainProblem::WriteOneStep 1ms 0.00076% 91.66% 719ms 0.54% VecDuplicate