File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12840ms, 85.83% of 14959ms total Dropped 745 nodes (cum <= 74.80ms) flat flat% sum% cum cum% 0 0% 0% 14946ms 99.91% __libc_start_call_main 0 0% 0% 14946ms 99.91% __libc_start_main_impl 0 0% 0% 14946ms 99.91% _start 0 0% 0% 14943ms 99.89% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14943ms 99.89% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14943ms 99.89% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14943ms 99.89% main 0 0% 0% 14904ms 99.63% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14904ms 99.63% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14904ms 99.63% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14882ms 99.49% AbstractCardiacProblem::Solve 0 0% 0% 11385ms 76.11% AbstractDynamicLinearPdeSolver::Solve 75ms 0.5% 0.5% 8995ms 60.13% AbstractCardiacTissue::SolveCellSystems 93ms 0.62% 1.12% 5365ms 35.86% AbstractCardiacCell::ComputeExceptVoltage 131ms 0.88% 2.00% 4710ms 31.49% AbstractOneStepIvpOdeSolver::InternalSolve 165ms 1.10% 3.10% 3973ms 26.56% EulerIvpOdeSolver::CalculateNextYValue 871ms 5.82% 8.92% 3760ms 25.14% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1712ms 11.44% 20.37% 3469ms 23.19% __GI___exp 0 0% 20.37% 3433ms 22.95% MonodomainProblem::WriteOneStep 1ms 0.0067% 20.38% 3280ms 21.93% H5Dwrite 1ms 0.0067% 20.38% 3274ms 21.89% Hdf5DataWriter::PutVector 5ms 0.033% 20.42% 3261ms 21.80% H5D__write 120ms 0.8% 21.22% 2926ms 19.56% AbstractCardiacTissue::UpdateCaches (inline) 831ms 5.56% 26.77% 2699ms 18.04% CellLuoRudy1991FromCellML::GetIIonic 3ms 0.02% 26.79% 1953ms 13.06% H5D__chunk_collective_write 15ms 0.1% 26.89% 1950ms 13.04% H5F_set_coll_metadata_reads 23ms 0.15% 27.05% 1699ms 11.36% H5FD_s3comms_uriencode 1364ms 9.12% 36.17% 1679ms 11.22% __ieee754_exp_fma 3ms 0.02% 36.19% 1606ms 10.74% LinearSystem::Solve 0 0% 36.19% 1464ms 9.79% KSPSolve 2ms 0.013% 36.20% 1464ms 9.79% KSPSolve_Private 3ms 0.02% 36.22% 1450ms 9.69% KSPSolve_CG 49ms 0.33% 36.55% 1320ms 8.82% 3ms 0.02% 36.57% 1313ms 8.78% H5F_block_write 3ms 0.02% 36.59% 1310ms 8.76% H5PB_write 1ms 0.0067% 36.59% 1307ms 8.74% H5F__accum_write 1ms 0.0067% 36.60% 1306ms 8.73% H5FD_write 1ms 0.0067% 36.61% 1215ms 8.12% H5D__mpio_select_write 10ms 0.067% 36.67% 1174ms 7.85% H5D__chunk_cacheable 0 0% 36.67% 1100ms 7.35% PMPI_File_write_at_all 1075ms 7.19% 43.86% 1076ms 7.19% __GI_pwritev64 309ms 2.07% 45.93% 1032ms 6.90% H5S_select_iterate 3ms 0.02% 45.95% 1004ms 6.71% std::pow (inline) 96ms 0.64% 46.59% 1000ms 6.68% __pow 96ms 0.64% 47.23% 903ms 6.04% __ieee754_pow_fma 1ms 0.0067% 47.24% 818ms 5.47% PCApply 1ms 0.0067% 47.24% 813ms 5.43% PCApply_BJacobi_Singleblock 0 0% 47.24% 776ms 5.19% KSPSolve_PREONLY 0 0% 47.24% 772ms 5.16% MatSolve 765ms 5.11% 52.36% 772ms 5.16% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 52.36% 772ms 5.16% PCApply_ICC 352ms 2.35% 54.71% 765ms 5.11% MonodomainSolver::SetupLinearSystem 86ms 0.57% 55.28% 738ms 4.93% H5D__chunk_set_sizes 6ms 0.04% 55.32% 569ms 3.80% MatMult 561ms 3.75% 59.07% 563ms 3.76% MatMult_SeqAIJ 0 0% 59.07% 556ms 3.72% KSP_PCApply.lto_priv.7 57ms 0.38% 59.46% 480ms 3.21% H5S_mpio_space_type 214ms 1.43% 60.89% 444ms 2.97% CellLuoRudy1991FromCellML::VerifyStateVariables 439ms 2.93% 63.82% 439ms 2.93% log_inline (inline) 1ms 0.0067% 63.83% 336ms 2.25% KSPConvergedDefault 314ms 2.10% 65.93% 324ms 2.17% exp_inline (inline) 124ms 0.83% 66.76% 284ms 1.90% TimeStepper::TimeStepper 0 0% 66.76% 268ms 1.79% KSP_PCApply 215ms 1.44% 68.19% 268ms 1.79% top12 (inline) 12ms 0.08% 68.27% 264ms 1.76% H5VM_chunk_index 46ms 0.31% 68.58% 240ms 1.60% __GI___libc_malloc 233ms 1.56% 70.14% 233ms 1.56% [libchaste_heart.so] 177ms 1.18% 71.32% 224ms 1.50% _int_malloc 8ms 0.053% 71.38% 200ms 1.34% ompi_datatype_destroy 9ms 0.06% 71.44% 196ms 1.31% MPI_Type_free 5ms 0.033% 71.47% 182ms 1.22% ompi_datatype_create 29ms 0.19% 71.66% 181ms 1.21% __GI___libc_free 7ms 0.047% 71.71% 173ms 1.16% ompi_info_register_framework_params 53ms 0.35% 72.06% 170ms 1.14% ompi_datatype_release_args 168ms 1.12% 73.19% 168ms 1.12% ddot_ 128ms 0.86% 74.04% 164ms 1.10% AbstractOneStepIvpOdeSolver::Solve 164ms 1.10% 75.14% 164ms 1.10% H5VM_chunk_index_scaled 52ms 0.35% 75.49% 163ms 1.09% AbstractCardiacCell::SetVoltage (partial-inline) 5ms 0.033% 75.52% 158ms 1.06% Hdf5DataWriter::PutUnlimitedVariable 39ms 0.26% 75.78% 156ms 1.04% H5S_set_version 154ms 1.03% 76.81% 154ms 1.03% asuint64 (inline) 153ms 1.02% 77.83% 153ms 1.02% TimeStepper::CalculateNextTime 62ms 0.41% 78.25% 152ms 1.02% _int_free 123ms 0.82% 79.07% 146ms 0.98% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 54ms 0.36% 79.43% 130ms 0.87% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 2ms 0.013% 79.44% 128ms 0.86% VecNorm 3ms 0.02% 79.46% 122ms 0.82% PMPI_File_set_view 60ms 0.4% 79.86% 117ms 0.78% H5S_hyper_add_span_element 43ms 0.29% 80.15% 117ms 0.78% H5VM_array_calc 2ms 0.013% 80.17% 117ms 0.78% VecNorm_Seq 112ms 0.75% 80.91% 112ms 0.75% __ieee754_log_fma 0 0% 80.91% 109ms 0.73% VecDuplicate 2ms 0.013% 80.93% 109ms 0.73% VecDuplicate_MPI 107ms 0.72% 81.64% 107ms 0.72% __memcpy_avx_unaligned_erms 1ms 0.0067% 81.65% 103ms 0.69% PMPI_Type_create_resized 5ms 0.033% 81.68% 103ms 0.69% ompi_datatype_duplicate 79ms 0.53% 82.21% 98ms 0.66% AbstractParameterisedSystem::GetAnyVariable 79ms 0.53% 82.74% 97ms 0.65% AbstractParameterisedSystem::SetAnyVariable 61ms 0.41% 83.15% 92ms 0.62% TimeStepper::AdvanceOneTimeStep 88ms 0.59% 83.74% 88ms 0.59% H5VM_array_offset_pre 2ms 0.013% 83.75% 88ms 0.59% VecTDot 22ms 0.15% 83.90% 85ms 0.57% __libc_calloc 0 0% 83.90% 83ms 0.55% VecTDot_Seq 0 0% 83.90% 83ms 0.55% VecXDot_Seq_Private.constprop.0 83ms 0.55% 84.45% 83ms 0.55% std::isinf (inline) 0 0% 84.45% 81ms 0.54% std::vector::_M_assign_aux (inline) 0 0% 84.45% 81ms 0.54% std::vector::assign (inline) 4ms 0.027% 84.48% 80ms 0.53% H5D__chunk_allocated 80ms 0.53% 85.01% 80ms 0.53% [libm.so.6] 34ms 0.23% 85.24% 79ms 0.53% AbstractCardiacCell::GetVoltage (partial-inline) 3ms 0.02% 85.26% 78ms 0.52% opal_datatype_create_desc 5ms 0.033% 85.29% 77ms 0.51% PMPI_Type_vector 2ms 0.013% 85.31% 77ms 0.51% VecCreate 3ms 0.02% 85.33% 76ms 0.51% PetscMallocA 75ms 0.5% 85.83% 76ms 0.51% std::vector::operator[] (inline) 0 0% 85.83% 75ms 0.5% H5D__select_write 1ms 0.0067% 85.83% 75ms 0.5% H5Dgather