File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 409ms, 85.39% of 479ms total Dropped 209 nodes (cum <= 2.40ms) flat flat% sum% cum cum% 0 0% 0% 471ms 98.33% __libc_start_call_main 0 0% 0% 471ms 98.33% __libc_start_main_impl 0 0% 0% 471ms 98.33% _start 0 0% 0% 468ms 97.70% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 468ms 97.70% CxxTest::TestRunner::runAllTests 0 0% 0% 468ms 97.70% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 468ms 97.70% main 0 0% 0% 432ms 90.19% CxxTest::RealTestDescription::run 0 0% 0% 432ms 90.19% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 432ms 90.19% CxxTest::TestRunner::runTest (inline) 0 0% 0% 432ms 90.19% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 432ms 90.19% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 427ms 89.14% AbstractCardiacProblem::Solve 0 0% 0% 425ms 88.73% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 392ms 81.84% LinearSystem::Solve 0 0% 0% 389ms 81.21% KSPSolve 0 0% 0% 389ms 81.21% KSPSolve_CG 0 0% 0% 389ms 81.21% KSPSolve_Private 0 0% 0% 233ms 48.64% KSP_PCApply.lto_priv.7 2ms 0.42% 0.42% 220ms 45.93% PCApply 0 0% 0.42% 219ms 45.72% PCApply_BJacobi_Singleblock 0 0% 0.42% 194ms 40.50% KSPSolve_PREONLY (partial-inline) 1ms 0.21% 0.63% 179ms 37.37% MatSolve 0 0% 0.63% 179ms 37.37% PCApply_ICC 178ms 37.16% 37.79% 178ms 37.16% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 37.79% 86ms 17.95% MatMult 3ms 0.63% 38.41% 86ms 17.95% MatMult_SeqAIJ 82ms 17.12% 55.53% 83ms 17.33% MatMult_SeqAIJ_Inode (inline) 49ms 10.23% 65.76% 49ms 10.23% ddot_ 0 0% 65.76% 33ms 6.89% CxxTest::RealWorldDescription::setUp 1ms 0.21% 65.97% 33ms 6.89% MatNullSpaceRemove 0 0% 65.97% 33ms 6.89% PMPI_Init_thread 0 0% 65.97% 33ms 6.89% PetscInitialize 0 0% 65.97% 33ms 6.89% PetscSetup::setUpWorld 0 0% 65.97% 33ms 6.89% PetscSetupUtils::CommonSetup 0 0% 65.97% 33ms 6.89% PetscSetupUtils::InitialisePetsc 0 0% 65.97% 33ms 6.89% ompi_mpi_init 0 0% 65.97% 29ms 6.05% VecTDot 0 0% 65.97% 29ms 6.05% VecTDot_Seq 0 0% 65.97% 29ms 6.05% VecXDot_Seq_Private.constprop.0 0 0% 65.97% 27ms 5.64% 1ms 0.21% 66.18% 27ms 5.64% AbstractCardiacTissue::SolveCellSystems 0 0% 66.18% 23ms 4.80% VecNorm 0 0% 66.18% 22ms 4.59% VecMDot 1ms 0.21% 66.39% 22ms 4.59% VecMXDot_Private 1ms 0.21% 66.60% 22ms 4.59% VecNorm_Seq 0 0% 66.60% 22ms 4.59% orte_init 21ms 4.38% 70.98% 21ms 4.38% VecMDot_Seq 1ms 0.21% 71.19% 16ms 3.34% AbstractCardiacCell::ComputeExceptVoltage 0 0% 71.19% 15ms 3.13% KSP_PCApply (partial-inline) 0 0% 71.19% 13ms 2.71% AbstractOneStepIvpOdeSolver::InternalSolve 6ms 1.25% 72.44% 13ms 2.71% __GI___exp 0 0% 72.44% 13ms 2.71% __GI__dl_catch_exception 0 0% 72.44% 13ms 2.71% _dl_catch_error 0 0% 72.44% 13ms 2.71% _dlerror_run 0 0% 72.44% 13ms 2.71% mca_base_framework_open 0 0% 72.44% 13ms 2.71% opal_stackframe_output 2ms 0.42% 72.86% 12ms 2.51% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 72.86% 12ms 2.51% EulerIvpOdeSolver::CalculateNextYValue 0 0% 72.86% 12ms 2.51% hwloc_topology_load 0 0% 72.86% 12ms 2.51% mca_base_framework_components_register 0 0% 72.86% 12ms 2.51% mca_base_framework_register 2ms 0.42% 73.28% 11ms 2.30% VecAYPX 0 0% 73.28% 11ms 2.30% ___dlopen 0 0% 73.28% 11ms 2.30% _dl_open 0 0% 73.28% 11ms 2.30% dl_open_worker 0 0% 73.28% 11ms 2.30% dlopen_doit 0 0% 73.28% 11ms 2.30% dlopen_implementation (inline) 1ms 0.21% 73.49% 11ms 2.30% hwloc_linux_get_tid_last_cpu_location 0 0% 73.49% 11ms 2.30% mca_base_component_find 0 0% 73.49% 11ms 2.30% mca_base_component_repository_open 0 0% 73.49% 10ms 2.09% VecDuplicate 0 0% 73.49% 10ms 2.09% VecMAXPY 8ms 1.67% 75.16% 10ms 2.09% VecMAXPY_Seq 0 0% 75.16% 10ms 2.09% _dl_init 0 0% 75.16% 10ms 2.09% call_init (inline) 0 0% 75.16% 9ms 1.88% AbstractCardiacTissue::UpdateCaches (inline) 9ms 1.88% 77.04% 9ms 1.88% VecAYPX_Seq 0 0% 77.04% 9ms 1.88% VecDuplicate_Seq 0 0% 77.04% 9ms 1.88% dl_open_worker_begin 3ms 0.63% 77.66% 8ms 1.67% CellLuoRudy1991FromCellML::GetIIonic 0 0% 77.66% 8ms 1.67% VecCreate 0 0% 77.66% 8ms 1.67% _dl_start_user 7ms 1.46% 79.12% 7ms 1.46% __ieee754_exp_fma 5ms 1.04% 80.17% 7ms 1.46% _dl_runtime_resolve_xsavec 1ms 0.21% 80.38% 6ms 1.25% BidomainSolver::SetupLinearSystem 1ms 0.21% 80.58% 6ms 1.25% PetscHeaderCreate_Private 0 0% 80.58% 6ms 1.25% VecAXPY 0 0% 80.58% 6ms 1.25% VecAXPY_Seq 0 0% 80.58% 6ms 1.25% _dl_map_object 6ms 1.25% 81.84% 6ms 1.25% daxpy_ 1ms 0.21% 82.05% 5ms 1.04% KSPConvergedDefault 1ms 0.21% 82.25% 5ms 1.04% VecDestroy 1ms 0.21% 82.46% 5ms 1.04% __GI___libc_free 0 0% 82.46% 5ms 1.04% _dl_lookup_symbol_x 0 0% 82.46% 5ms 1.04% mca_base_framework_components_open 0 0% 82.46% 5ms 1.04% mca_topo_base_dist_graph_neighbors_count 0 0% 82.46% 5ms 1.04% orte_ess_base_proc_binding 0 0% 82.46% 4ms 0.84% AbstractCardiacProblem::Initialise 1ms 0.21% 82.67% 4ms 0.84% __GI___libc_malloc 0 0% 82.67% 4ms 0.84% _dl_map_object_from_fd 2ms 0.42% 83.09% 4ms 0.84% _int_free 0 0% 83.09% 4ms 0.84% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 83.09% 4ms 0.84% boost::serialization::singleton::get_instance 3ms 0.63% 83.72% 4ms 0.84% do_lookup_x 0 0% 83.72% 4ms 0.84% opal_hwloc_base_get_topology 0 0% 83.72% 3ms 0.63% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 83.72% 3ms 0.63% CxxTest::RealWorldDescription::tearDown 0 0% 83.72% 3ms 0.63% DistributedTetrahedralMesh::ConstructFromMeshReader 2ms 0.42% 84.13% 3ms 0.63% KSP_RemoveNullSpace (inline) 0 0% 84.13% 3ms 0.63% MPI_Comm_set_attr 0 0% 84.13% 3ms 0.63% PetscFinalize 1ms 0.21% 84.34% 3ms 0.63% PetscMallocA 0 0% 84.34% 3ms 0.63% PetscSetup::tearDownWorld 0 0% 84.34% 3ms 0.63% PetscSetupUtils::CommonFinalize 0 0% 84.34% 3ms 0.63% VecNorm_MPI 1ms 0.21% 84.55% 3ms 0.63% VecNorm_MPI_Default.constprop.0 3ms 0.63% 85.18% 3ms 0.63% __GI___libc_read 0 0% 85.18% 3ms 0.63% __GI_exit 0 0% 85.18% 3ms 0.63% __cxa_finalize 0 0% 85.18% 3ms 0.63% __run_exit_handlers 0 0% 85.18% 3ms 0.63% _dl_call_fini 0 0% 85.18% 3ms 0.63% _dl_fini 0 0% 85.18% 3ms 0.63% _dl_map_object_deps 0 0% 85.18% 3ms 0.63% _dl_map_segments (inline) 0 0% 85.18% 3ms 0.63% _dl_open_relocate_one_object (inline) 0 0% 85.18% 3ms 0.63% _dl_relocate_object 0 0% 85.18% 3ms 0.63% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 85.18% 3ms 0.63% elf_dynamic_do_Rela (inline) 0 0% 85.18% 3ms 0.63% elf_machine_rela (inline) 1ms 0.21% 85.39% 3ms 0.63% ompi_attr_set_c 0 0% 85.39% 3ms 0.63% ompi_mpi_finalize 0 0% 85.39% 3ms 0.63% openaux 0 0% 85.39% 3ms 0.63% resolve_map (inline)