File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 117666ms, 91.08% of 129192ms total Dropped 1166 nodes (cum <= 645.96ms) flat flat% sum% cum cum% 0 0% 0% 129176ms 100% __libc_start_call_main 0 0% 0% 129176ms 100% __libc_start_main_impl 0 0% 0% 129176ms 100% _start 0 0% 0% 129172ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 129172ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 129172ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 129172ms 100% main 1ms 0.00077% 0.00077% 129135ms 100% AbstractConvergenceTester::Converge 0 0% 0.00077% 129135ms 100% CxxTest::RealTestDescription::run 0 0% 0.00077% 129135ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0.00077% 129135ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0.00077% 129135ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0.00077% 129135ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 2ms 0.0015% 0.0023% 127957ms 99.04% AbstractCardiacProblem::Solve 12ms 0.0093% 0.012% 127154ms 98.42% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0031% 0.015% 70034ms 54.21% LinearSystem::Solve 6ms 0.0046% 0.019% 69556ms 53.84% KSPSolve 8ms 0.0062% 0.026% 69555ms 53.84% KSPSolve_Private 13ms 0.01% 0.036% 69216ms 53.58% KSPSolve_SYMMLQ 459ms 0.36% 0.39% 47621ms 36.86% AbstractCardiacTissue::SolveCellSystems 9ms 0.007% 0.4% 39905ms 30.89% PCApply 12ms 0.0093% 0.41% 39890ms 30.88% PCApply_BJacobi_Singleblock 0 0% 0.41% 37591ms 29.10% KSPSolve_PREONLY (partial-inline) 1064ms 0.82% 1.23% 37273ms 28.85% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 10ms 0.0077% 1.24% 36485ms 28.24% PCApply_ICC 4ms 0.0031% 1.24% 36475ms 28.23% MatSolve 36052ms 27.91% 29.15% 36471ms 28.23% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 3ms 0.0023% 29.15% 34209ms 26.48% KSP_PCApply.lto_priv.18 7707ms 5.97% 35.12% 32923ms 25.48% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 10ms 0.0077% 35.12% 24369ms 18.86% MatMult 248ms 0.19% 35.31% 24359ms 18.85% MatMult_SeqAIJ (partial-inline) 23845ms 18.46% 53.77% 24355ms 18.85% MatMult_SeqAIJ_Inode (inline) 2277ms 1.76% 55.53% 16924ms 13.10% CardiacNewtonSolver::Solve 5484ms 4.24% 59.78% 10090ms 7.81% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1546ms 1.20% 60.98% 9909ms 7.67% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 222ms 0.17% 61.15% 8952ms 6.93% AbstractCardiacTissue::UpdateCaches (inline) 1668ms 1.29% 62.44% 8353ms 6.47% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1166ms 0.9% 63.34% 8263ms 6.40% BidomainSolver::SetupLinearSystem 8091ms 6.26% 69.60% 8091ms 6.26% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 69.60% 7602ms 5.88% KSP_PCApply (partial-inline) 5ms 0.0039% 69.61% 7085ms 5.48% KSPConvergedDefault 4286ms 3.32% 72.93% 4395ms 3.40% __ieee754_log_fma 0 0% 72.93% 4079ms 3.16% boost::numeric::ublas::norm_inf (inline) 2842ms 2.20% 75.13% 4079ms 3.16% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 75.13% 4079ms 3.16% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 75.13% 4079ms 3.16% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3641ms 2.82% 77.94% 3641ms 2.82% ddot_ 3ms 0.0023% 77.95% 3243ms 2.51% MatNullSpaceRemove 27ms 0.021% 77.97% 3133ms 2.43% std::pow (inline) 5ms 0.0039% 77.97% 3116ms 2.41% VecDot 2052ms 1.59% 79.56% 3115ms 2.41% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 0 0% 79.56% 3111ms 2.41% VecDot_Seq 4ms 0.0031% 79.56% 3111ms 2.41% VecXDot_Seq_Private.constprop.0 419ms 0.32% 79.89% 3086ms 2.39% __pow 2687ms 2.08% 81.97% 2687ms 2.08% __memcpy_avx_unaligned_erms 0 0% 81.97% 2638ms 2.04% PetscMemcpy (inline) 354ms 0.27% 82.24% 2626ms 2.03% __ieee754_pow_fma 20ms 0.015% 82.26% 2252ms 1.74% VecCopy 2ms 0.0015% 82.26% 2229ms 1.73% VecCopy_Seq (partial-inline) 6ms 0.0046% 82.26% 2072ms 1.60% VecMDot 16ms 0.012% 82.27% 2066ms 1.60% VecMXDot_Private 2036ms 1.58% 83.85% 2044ms 1.58% VecMDot_Seq 1ms 0.00077% 83.85% 1996ms 1.54% AbstractFeVolumeIntegralAssembler::DoAssemble 10ms 0.0077% 83.86% 1734ms 1.34% VecAXPY 5ms 0.0039% 83.86% 1724ms 1.33% VecAXPY_Seq 1710ms 1.32% 85.19% 1710ms 1.32% daxpy_ 19ms 0.015% 85.20% 1651ms 1.28% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1539ms 1.19% 86.39% 1594ms 1.23% exp_inline (inline) 0 0% 86.39% 1382ms 1.07% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.39% 1226ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.39% 1226ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.39% 1226ms 0.95% boost_numeric_ublas_abs (inline) 1226ms 0.95% 87.34% 1226ms 0.95% std::abs (inline) 6ms 0.0046% 87.35% 1168ms 0.9% VecMAXPY 1157ms 0.9% 88.24% 1162ms 0.9% VecMAXPY_Seq 8ms 0.0062% 88.25% 1085ms 0.84% boost::numeric::ublas::matrix_assign (inline) 220ms 0.17% 88.42% 1069ms 0.83% boost::numeric::ublas::indexing_matrix_assign 680ms 0.53% 88.94% 1022ms 0.79% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.94% 1016ms 0.79% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.94% 1016ms 0.79% CuboidMeshConstructor::Construct 0 0% 88.94% 1016ms 0.79% DistributedTetrahedralMesh::ConstructCuboid 965ms 0.75% 89.69% 965ms 0.75% [libchaste_heart.so] 5ms 0.0039% 89.70% 904ms 0.7% Element::Element 9ms 0.007% 89.70% 888ms 0.69% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0015% 89.70% 881ms 0.68% AbstractBidomainSolver::FinaliseLinearSystem 277ms 0.21% 89.92% 877ms 0.68% AbstractBidomainSolver::CheckCompatibilityCondition 7ms 0.0054% 89.92% 857ms 0.66% BidomainAssembler::ComputeMatrixTerm 8ms 0.0062% 89.93% 835ms 0.65% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00077% 89.93% 826ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.0015% 89.93% 784ms 0.61% VecNorm 0 0% 89.93% 774ms 0.6% VecNorm_Seq 745ms 0.58% 90.51% 745ms 0.58% __memset_avx2_unaligned_erms 0 0% 90.51% 737ms 0.57% PetscMemzero (inline) 1ms 0.00077% 90.51% 735ms 0.57% BidomainProblem::WriteOneStep 7ms 0.0054% 90.51% 731ms 0.57% VecScale 1ms 0.00077% 90.52% 724ms 0.56% VecScale_Seq 723ms 0.56% 91.08% 723ms 0.56% dscal_ 4ms 0.0031% 91.08% 661ms 0.51% VecDuplicate