File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 2765ms, 88.45% of 3126ms total Dropped 379 nodes (cum <= 15.63ms) flat flat% sum% cum cum% 0 0% 0% 3120ms 99.81% __libc_start_call_main 0 0% 0% 3120ms 99.81% __libc_start_main_impl 0 0% 0% 3120ms 99.81% _start 0 0% 0% 3118ms 99.74% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 3118ms 99.74% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 3118ms 99.74% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 3118ms 99.74% main 0 0% 0% 3087ms 98.75% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 3087ms 98.75% CxxTest::TestRunner::runTest (inline) 0 0% 0% 3087ms 98.75% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 0 0% 0% 3081ms 98.56% AbstractCardiacProblem::Solve 1ms 0.032% 0.032% 3077ms 98.43% AbstractDynamicLinearPdeSolver::Solve 8ms 0.26% 0.29% 1486ms 47.54% AbstractCardiacTissue::SolveCellSystems 0 0% 0.29% 1233ms 39.44% LinearSystem::Solve 1ms 0.032% 0.32% 1200ms 38.39% KSPSolve 1ms 0.032% 0.35% 1200ms 38.39% KSPSolve_Private 0 0% 0.35% 1170ms 37.43% KSPSolve_SYMMLQ 13ms 0.42% 0.77% 843ms 26.97% AbstractCardiacCell::ComputeExceptVoltage 19ms 0.61% 1.38% 760ms 24.31% AbstractOneStepIvpOdeSolver::InternalSolve 2ms 0.064% 1.44% 670ms 21.43% PCApply 1ms 0.032% 1.47% 667ms 21.34% PCApply_BJacobi_Singleblock 67ms 2.14% 3.61% 654ms 20.92% EulerIvpOdeSolver::CalculateNextYValue 3ms 0.096% 3.71% 635ms 20.31% MatMult 9ms 0.29% 4.00% 630ms 20.15% MatMult_SeqAIJ (partial-inline) 621ms 19.87% 23.86% 629ms 20.12% MatMult_SeqAIJ_Inode (inline) 214ms 6.85% 30.71% 576ms 18.43% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 30.71% 559ms 17.88% KSPSolve_PREONLY (partial-inline) 12ms 0.38% 31.09% 535ms 17.11% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.064% 31.16% 531ms 16.99% MatSolve 0 0% 31.16% 531ms 16.99% PCApply_ICC 521ms 16.67% 47.82% 526ms 16.83% MatSolve_SeqSBAIJ_1_NaturalOrdering 216ms 6.91% 54.73% 513ms 16.41% CellLuoRudy1991FromCellML::GetIIonic 0 0% 54.73% 484ms 15.48% KSP_PCApply.lto_priv.18 155ms 4.96% 59.69% 445ms 14.24% __GI___exp 17ms 0.54% 60.24% 340ms 10.88% BidomainSolver::SetupLinearSystem 249ms 7.97% 68.20% 249ms 7.97% __ieee754_exp_fma 0 0% 68.20% 242ms 7.74% KSPConvergedDefault 0 0% 68.20% 227ms 7.26% KSP_PCApply (partial-inline) 6ms 0.19% 68.39% 159ms 5.09% std::pow (inline) 8ms 0.26% 68.65% 150ms 4.80% __pow 10ms 0.32% 68.97% 142ms 4.54% __ieee754_pow_fma 0 0% 68.97% 85ms 2.72% MatNullSpaceRemove 60ms 1.92% 70.89% 82ms 2.62% CellLuoRudy1991FromCellML::VerifyStateVariables 78ms 2.50% 73.38% 78ms 2.50% [libchaste_heart.so] 68ms 2.18% 75.56% 72ms 2.30% exp_inline (inline) 0 0% 75.56% 70ms 2.24% VecDuplicate 58ms 1.86% 77.42% 58ms 1.86% log_inline (inline) 12ms 0.38% 77.80% 56ms 1.79% MPI_Wtime 45ms 1.44% 79.24% 45ms 1.44% [libm.so.6] 1ms 0.032% 79.27% 44ms 1.41% VecMAXPY 1ms 0.032% 79.30% 43ms 1.38% __GI___clock_gettime 42ms 1.34% 80.65% 42ms 1.34% [[vdso]] 3ms 0.096% 80.74% 41ms 1.31% PetscLogEventBeginDefault 0 0% 80.74% 41ms 1.31% VecMDot 4ms 0.13% 80.87% 41ms 1.31% VecMXDot_Private 39ms 1.25% 82.12% 39ms 1.25% ddot_ 0 0% 82.12% 37ms 1.18% VecDuplicate_Seq 6ms 0.19% 82.31% 34ms 1.09% PetscLogEventEndDefault 3ms 0.096% 82.41% 33ms 1.06% VecDuplicate_MPI 32ms 1.02% 83.43% 32ms 1.02% TimeStepper::CalculateNextTime 5ms 0.16% 83.59% 30ms 0.96% PetscMallocA 0 0% 83.59% 29ms 0.93% CxxTest::RealWorldDescription::setUp 0 0% 83.59% 29ms 0.93% PMPI_Init_thread 0 0% 83.59% 29ms 0.93% PetscInitialize 0 0% 83.59% 29ms 0.93% PetscSetup::setUpWorld 0 0% 83.59% 29ms 0.93% PetscSetupUtils::CommonSetup 0 0% 83.59% 29ms 0.93% PetscSetupUtils::InitialisePetsc 0 0% 83.59% 29ms 0.93% VecNorm 0 0% 83.59% 29ms 0.93% ompi_mpi_init 8ms 0.26% 83.85% 28ms 0.9% TimeStepper::AdvanceOneTimeStep 0 0% 83.85% 28ms 0.9% VecDot 26ms 0.83% 84.68% 28ms 0.9% VecMDot_Seq 8ms 0.26% 84.93% 27ms 0.86% TimeStepper::TimeStepper 0 0% 84.93% 27ms 0.86% VecCreate 27ms 0.86% 85.80% 27ms 0.86% VecMAXPY_Seq 1ms 0.032% 85.83% 25ms 0.8% 3ms 0.096% 85.92% 25ms 0.8% PetscMallocAlign 0 0% 85.92% 25ms 0.8% VecNorm_Seq 3ms 0.096% 86.02% 24ms 0.77% VecCopy 0 0% 86.02% 24ms 0.77% VecDestroy 0 0% 86.02% 23ms 0.74% VecDot_Seq 0 0% 86.02% 23ms 0.74% VecXDot_Seq_Private.constprop.0 4ms 0.13% 86.15% 22ms 0.7% AbstractCardiacCell::SetVoltage (partial-inline) 13ms 0.42% 86.56% 21ms 0.67% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 0 0% 86.56% 21ms 0.67% VecAXPY 3ms 0.096% 86.66% 21ms 0.67% VecSetType 0 0% 86.66% 20ms 0.64% orte_init 0 0% 86.66% 18ms 0.58% VecNorm_MPI 0 0% 86.66% 18ms 0.58% VecNorm_MPI_Default.constprop.0 11ms 0.35% 87.01% 18ms 0.58% __GI___libc_malloc 8ms 0.26% 87.27% 17ms 0.54% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 2ms 0.064% 87.33% 17ms 0.54% PMPI_Comm_get_attr 17ms 0.54% 87.88% 17ms 0.54% [libchaste_ode.so] 2ms 0.064% 87.94% 17ms 0.54% __posix_memalign 0 0% 87.94% 16ms 0.51% VecCreate_MPI_Private 16ms 0.51% 88.45% 16ms 0.51% __memcpy_avx512_unaligned_erms