File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 391ms, 87.87% of 445ms total Dropped 229 nodes (cum <= 2.23ms) flat flat% sum% cum cum% 0 0% 0% 438ms 98.43% __libc_start_call_main 0 0% 0% 438ms 98.43% __libc_start_main_impl 0 0% 0% 438ms 98.43% _start 0 0% 0% 435ms 97.75% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 435ms 97.75% CxxTest::TestRunner::runAllTests 0 0% 0% 435ms 97.75% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 435ms 97.75% main 0 0% 0% 400ms 89.89% CxxTest::RealTestDescription::run 0 0% 0% 400ms 89.89% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 400ms 89.89% CxxTest::TestRunner::runTest (inline) 0 0% 0% 400ms 89.89% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 400ms 89.89% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 395ms 88.76% AbstractCardiacProblem::Solve 0 0% 0% 395ms 88.76% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 362ms 81.35% LinearSystem::Solve 0 0% 0% 361ms 81.12% KSPSolve 0 0% 0% 361ms 81.12% KSPSolve_Private 0 0% 0% 360ms 80.90% KSPSolve_CG 0 0% 0% 217ms 48.76% KSP_PCApply.lto_priv.7 1ms 0.22% 0.22% 214ms 48.09% PCApply 0 0% 0.22% 212ms 47.64% PCApply_BJacobi_Singleblock 0 0% 0.22% 182ms 40.90% KSPSolve_PREONLY (partial-inline) 0 0% 0.22% 173ms 38.88% MatSolve 172ms 38.65% 38.88% 173ms 38.88% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 38.88% 173ms 38.88% PCApply_ICC 0 0% 38.88% 69ms 15.51% MatMult 4ms 0.9% 39.78% 69ms 15.51% MatMult_SeqAIJ (partial-inline) 65ms 14.61% 54.38% 69ms 15.51% MatMult_SeqAIJ_Inode (inline) 47ms 10.56% 64.94% 47ms 10.56% ddot_ 0 0% 64.94% 31ms 6.97% CxxTest::RealWorldDescription::setUp 0 0% 64.94% 31ms 6.97% PMPI_Init_thread 0 0% 64.94% 31ms 6.97% PetscInitialize 0 0% 64.94% 31ms 6.97% PetscSetup::setUpWorld 0 0% 64.94% 31ms 6.97% PetscSetupUtils::CommonSetup 0 0% 64.94% 31ms 6.97% PetscSetupUtils::InitialisePetsc 0 0% 64.94% 31ms 6.97% ompi_mpi_init 1ms 0.22% 65.17% 29ms 6.52% VecTDot 0 0% 65.17% 28ms 6.29% AbstractCardiacTissue::SolveCellSystems 0 0% 65.17% 28ms 6.29% VecTDot_Seq 0 0% 65.17% 28ms 6.29% VecXDot_Seq_Private.constprop.0 0 0% 65.17% 24ms 5.39% 0 0% 65.17% 22ms 4.94% MatNullSpaceRemove 0 0% 65.17% 21ms 4.72% orte_init 0 0% 65.17% 19ms 4.27% VecNorm 0 0% 65.17% 19ms 4.27% VecNorm_Seq 0 0% 65.17% 14ms 3.15% VecMAXPY 14ms 3.15% 68.31% 14ms 3.15% VecMAXPY_Seq 1ms 0.22% 68.54% 13ms 2.92% AbstractCardiacCell::ComputeExceptVoltage 0 0% 68.54% 13ms 2.92% VecDuplicate 0 0% 68.54% 13ms 2.92% VecDuplicate_Seq 0 0% 68.54% 13ms 2.92% __GI__dl_catch_exception 0 0% 68.54% 13ms 2.92% _dl_catch_error 0 0% 68.54% 13ms 2.92% _dlerror_run 0 0% 68.54% 13ms 2.92% hwloc_topology_load 0 0% 68.54% 13ms 2.92% mca_base_framework_components_register 0 0% 68.54% 13ms 2.92% mca_base_framework_open 0 0% 68.54% 13ms 2.92% mca_base_framework_register 0 0% 68.54% 12ms 2.70% KSP_PCApply (partial-inline) 0 0% 68.54% 12ms 2.70% hwloc_linux_get_tid_last_cpu_location 0 0% 68.54% 11ms 2.47% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.22% 68.76% 11ms 2.47% VecAXPY 0 0% 68.76% 11ms 2.47% VecAYPX 11ms 2.47% 71.24% 11ms 2.47% VecAYPX_Seq 0 0% 71.24% 11ms 2.47% ___dlopen 0 0% 71.24% 11ms 2.47% _dl_open 0 0% 71.24% 11ms 2.47% dl_open_worker 0 0% 71.24% 11ms 2.47% dl_open_worker_begin 0 0% 71.24% 11ms 2.47% dlopen_doit 0 0% 71.24% 11ms 2.47% dlopen_implementation (inline) 0 0% 71.24% 11ms 2.47% opal_stackframe_output 0 0% 71.24% 10ms 2.25% VecAXPY_Seq 0 0% 71.24% 10ms 2.25% VecCreate 10ms 2.25% 73.48% 10ms 2.25% daxpy_ 0 0% 73.48% 10ms 2.25% mca_base_component_find 0 0% 73.48% 10ms 2.25% mca_base_component_repository_open 7ms 1.57% 75.06% 9ms 2.02% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 75.06% 9ms 2.02% EulerIvpOdeSolver::CalculateNextYValue 0 0% 75.06% 8ms 1.80% VecMDot 7ms 1.57% 76.63% 8ms 1.80% VecMDot_Seq 0 0% 76.63% 8ms 1.80% VecMXDot_Private 0 0% 76.63% 7ms 1.57% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.45% 77.08% 7ms 1.57% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.22% 77.30% 7ms 1.57% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 77.30% 7ms 1.57% _dl_init 0 0% 77.30% 7ms 1.57% _dl_start_user 0 0% 77.30% 7ms 1.57% call_init (inline) 0 0% 77.30% 6ms 1.35% KSPConvergedDefault 0 0% 77.30% 6ms 1.35% PetscMallocA 0 0% 77.30% 6ms 1.35% PetscMallocAlign (partial-inline) 1ms 0.22% 77.53% 6ms 1.35% __GI___libc_malloc 0 0% 77.53% 6ms 1.35% _dl_lookup_symbol_x 0 0% 77.53% 6ms 1.35% _dl_map_object 1ms 0.22% 77.75% 6ms 1.35% boost::serialization::singleton::get_instance 1ms 0.22% 77.98% 5ms 1.12% PetscHeaderCreate_Private 1ms 0.22% 78.20% 5ms 1.12% VecDestroy 1ms 0.22% 78.43% 5ms 1.12% __GI___exp 5ms 1.12% 79.55% 5ms 1.12% __GI___libc_read 0 0% 79.55% 5ms 1.12% _dl_open_relocate_one_object (inline) 0 0% 79.55% 5ms 1.12% _dl_relocate_object 0 0% 79.55% 5ms 1.12% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 5ms 1.12% 80.67% 5ms 1.12% do_lookup_x 0 0% 80.67% 5ms 1.12% elf_dynamic_do_Rela (inline) 0 0% 80.67% 5ms 1.12% elf_machine_rela (inline) 0 0% 80.67% 5ms 1.12% opal_hwloc_base_get_topology 0 0% 80.67% 5ms 1.12% orte_ess_base_proc_binding 0 0% 80.67% 5ms 1.12% resolve_map (inline) 0 0% 80.67% 4ms 0.9% AbstractCardiacProblem::Initialise 1ms 0.22% 80.90% 4ms 0.9% BidomainSolver::SetupLinearSystem 0 0% 80.90% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 80.90% 4ms 0.9% KSPConvergedReasonViewFromOptions 0 0% 80.90% 4ms 0.9% PetscFinalize 1ms 0.22% 81.12% 4ms 0.9% PetscOptionsFindPair 0 0% 81.12% 4ms 0.9% PetscOptionsGetViewer 0 0% 81.12% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 81.12% 4ms 0.9% PetscSetupUtils::CommonFinalize 0 0% 81.12% 4ms 0.9% VecSetType 4ms 0.9% 82.02% 4ms 0.9% __ieee754_exp_fma 0 0% 82.02% 4ms 0.9% __posix_memalign 4ms 0.9% 82.92% 4ms 0.9% __strcmp_avx2 3ms 0.67% 83.60% 4ms 0.9% _int_malloc 0 0% 83.60% 4ms 0.9% mca_base_var_group_register 0 0% 83.60% 3ms 0.67% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 83.60% 3ms 0.67% PCSetUp 3ms 0.67% 84.27% 3ms 0.67% PetscInfo_Private 0 0% 84.27% 3ms 0.67% PetscMemzero (inline) 0 0% 84.27% 3ms 0.67% __GI_exit 0 0% 84.27% 3ms 0.67% ___asprintf_chk 0 0% 84.27% 3ms 0.67% __cxa_finalize 3ms 0.67% 84.94% 3ms 0.67% __libc_openat64 3ms 0.67% 85.62% 3ms 0.67% __memcpy_avx_unaligned_erms 3ms 0.67% 86.29% 3ms 0.67% __memset_avx2_unaligned_erms 0 0% 86.29% 3ms 0.67% __run_exit_handlers 0 0% 86.29% 3ms 0.67% __vasprintf_internal 0 0% 86.29% 3ms 0.67% _dl_call_fini 0 0% 86.29% 3ms 0.67% _dl_fini 0 0% 86.29% 3ms 0.67% boost::archive::detail::pointer_iserializer::pointer_iserializer (inline) 0 0% 86.29% 3ms 0.67% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 86.29% 3ms 0.67% boost::serialization::extended_type_info_typeid::extended_type_info_typeid (inline) 0 0% 86.29% 3ms 0.67% boost::serialization::singleton::get_const_instance (inline) 1ms 0.22% 86.52% 3ms 0.67% kh_get_HO (inline) 0 0% 86.52% 3ms 0.67% mca_base_var_register 0 0% 86.52% 3ms 0.67% ompi_mpi_finalize 3ms 0.67% 87.19% 3ms 0.67% std::isinf (inline) 3ms 0.67% 87.87% 3ms 0.67% strcmp