File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12954ms, 86.52% of 14973ms total Dropped 753 nodes (cum <= 74.86ms) flat flat% sum% cum cum% 0 0% 0% 14966ms 100% __libc_start_call_main 0 0% 0% 14966ms 100% __libc_start_main_impl 0 0% 0% 14966ms 100% _start 0 0% 0% 14963ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14963ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14963ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14963ms 99.93% main 0 0% 0% 14927ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14927ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14927ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14905ms 99.55% AbstractCardiacProblem::Solve 2ms 0.013% 0.02% 11396ms 76.11% AbstractDynamicLinearPdeSolver::Solve 94ms 0.63% 0.65% 9175ms 61.28% AbstractCardiacTissue::SolveCellSystems 170ms 1.14% 1.78% 5659ms 37.79% AbstractCardiacCell::ComputeExceptVoltage 188ms 1.26% 3.04% 4853ms 32.41% AbstractOneStepIvpOdeSolver::InternalSolve 195ms 1.30% 4.34% 4119ms 27.51% EulerIvpOdeSolver::CalculateNextYValue 894ms 5.97% 10.31% 3879ms 25.91% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1713ms 11.44% 21.75% 3575ms 23.88% __GI___exp 1ms 0.0067% 21.76% 3445ms 23.01% MonodomainProblem::WriteOneStep 0 0% 21.76% 3304ms 22.07% Hdf5DataWriter::PutVector 0 0% 21.76% 3281ms 21.91% H5Dwrite 3ms 0.02% 21.78% 3254ms 21.73% H5D__write 122ms 0.81% 22.59% 2635ms 17.60% AbstractCardiacTissue::UpdateCaches (inline) 796ms 5.32% 27.91% 2472ms 16.51% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.91% 1877ms 12.54% H5D__chunk_collective_write 28ms 0.19% 28.10% 1877ms 12.54% H5F_set_coll_metadata_reads 1615ms 10.79% 38.88% 1777ms 11.87% __ieee754_exp_fma 12ms 0.08% 38.96% 1624ms 10.85% H5FD_s3comms_uriencode 1ms 0.0067% 38.97% 1439ms 9.61% LinearSystem::Solve 0 0% 38.97% 1295ms 8.65% KSPSolve 2ms 0.013% 38.98% 1295ms 8.65% KSPSolve_Private 4ms 0.027% 39.01% 1284ms 8.58% KSPSolve_CG 8ms 0.053% 39.06% 1269ms 8.48% H5D__chunk_cacheable 1ms 0.0067% 39.07% 1218ms 8.13% H5F_block_write 2ms 0.013% 39.08% 1217ms 8.13% H5PB_write 1ms 0.0067% 39.09% 1215ms 8.11% H5FD_write 0 0% 39.09% 1215ms 8.11% H5F__accum_write 46ms 0.31% 39.40% 1213ms 8.10% 6ms 0.04% 39.44% 1129ms 7.54% H5D__mpio_select_write 449ms 3.00% 42.44% 1081ms 7.22% H5S_select_iterate 0 0% 42.44% 1016ms 6.79% PMPI_File_write_at_all 985ms 6.58% 49.01% 985ms 6.58% __GI_pwritev64 5ms 0.033% 49.05% 861ms 5.75% std::pow (inline) 77ms 0.51% 49.56% 856ms 5.72% __pow 103ms 0.69% 50.25% 777ms 5.19% __ieee754_pow_fma 321ms 2.14% 52.39% 762ms 5.09% MonodomainSolver::SetupLinearSystem 2ms 0.013% 52.41% 681ms 4.55% PCApply 1ms 0.0067% 52.41% 677ms 4.52% PCApply_BJacobi_Singleblock 3ms 0.02% 52.43% 653ms 4.36% KSPSolve_PREONLY 1ms 0.0067% 52.44% 646ms 4.31% MatSolve 0 0% 52.44% 646ms 4.31% PCApply_ICC 84ms 0.56% 53.00% 645ms 4.31% H5D__chunk_set_sizes 636ms 4.25% 57.25% 645ms 4.31% MatSolve_SeqSBAIJ_1_NaturalOrdering 315ms 2.10% 59.35% 633ms 4.23% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0067% 59.36% 574ms 3.83% MatMult 570ms 3.81% 63.17% 573ms 3.83% MatMult_SeqAIJ 60ms 0.4% 63.57% 501ms 3.35% H5S_mpio_space_type 0 0% 63.57% 461ms 3.08% KSP_PCApply.lto_priv.7 372ms 2.48% 66.05% 372ms 2.48% log_inline (inline) 2ms 0.013% 66.07% 288ms 1.92% KSPConvergedDefault 271ms 1.81% 67.88% 275ms 1.84% exp_inline (inline) 142ms 0.95% 68.82% 257ms 1.72% TimeStepper::TimeStepper 0 0% 68.82% 223ms 1.49% KSP_PCApply 44ms 0.29% 69.12% 219ms 1.46% __GI___libc_malloc 189ms 1.26% 70.38% 217ms 1.45% _int_malloc 112ms 0.75% 71.13% 196ms 1.31% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 9ms 0.06% 71.19% 194ms 1.30% MPI_Type_free 8ms 0.053% 71.24% 194ms 1.30% ompi_datatype_destroy 34ms 0.23% 71.47% 191ms 1.28% __GI___libc_free 107ms 0.71% 72.18% 190ms 1.27% top12 (inline) 183ms 1.22% 73.41% 183ms 1.22% [libchaste_heart.so] 16ms 0.11% 73.51% 178ms 1.19% H5VM_chunk_index 10ms 0.067% 73.58% 176ms 1.18% ompi_datatype_create 60ms 0.4% 73.98% 175ms 1.17% ompi_datatype_release_args 10ms 0.067% 74.05% 175ms 1.17% ompi_info_register_framework_params 42ms 0.28% 74.33% 174ms 1.16% AbstractCardiacCell::SetVoltage (partial-inline) 138ms 0.92% 75.25% 159ms 1.06% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 158ms 1.06% 76.30% 158ms 1.06% std::isinf (inline) 63ms 0.42% 76.72% 157ms 1.05% _int_free 119ms 0.79% 77.52% 154ms 1.03% AbstractOneStepIvpOdeSolver::Solve 151ms 1.01% 78.53% 151ms 1.01% ddot_ 0 0% 78.53% 140ms 0.94% Hdf5DataWriter::PutUnlimitedVariable 23ms 0.15% 78.68% 136ms 0.91% H5S_set_version 57ms 0.38% 79.06% 121ms 0.81% H5S_hyper_add_span_element 0 0% 79.06% 119ms 0.79% PMPI_File_set_view 119ms 0.79% 79.86% 119ms 0.79% TimeStepper::CalculateNextTime 0 0% 79.86% 116ms 0.77% VecDuplicate 1ms 0.0067% 79.86% 116ms 0.77% VecDuplicate_MPI 116ms 0.77% 80.64% 116ms 0.77% __memcpy_avx_unaligned_erms 48ms 0.32% 80.96% 113ms 0.75% H5VM_array_calc 103ms 0.69% 81.65% 110ms 0.73% AbstractParameterisedSystem::SetAnyVariable 107ms 0.71% 82.36% 107ms 0.71% __ieee754_log_fma 2ms 0.013% 82.37% 101ms 0.67% VecNorm 0 0% 82.37% 101ms 0.67% VecTDot 0 0% 82.37% 101ms 0.67% VecTDot_Seq 1ms 0.0067% 82.38% 101ms 0.67% VecXDot_Seq_Private.constprop.0 50ms 0.33% 82.72% 97ms 0.65% std::__cxx11::basic_string::basic_string 28ms 0.19% 82.90% 94ms 0.63% __libc_calloc 4ms 0.027% 82.93% 93ms 0.62% PMPI_Type_create_resized 1ms 0.0067% 82.94% 92ms 0.61% MPI_Type_contiguous 3ms 0.02% 82.96% 91ms 0.61% VecNorm_Seq 35ms 0.23% 83.19% 91ms 0.61% ompi_datatype_set_args 1ms 0.0067% 83.20% 90ms 0.6% opal_datatype_create_desc 87ms 0.58% 83.78% 87ms 0.58% [libm.so.6] 2ms 0.013% 83.79% 87ms 0.58% ompi_datatype_duplicate 86ms 0.57% 84.37% 86ms 0.57% asuint64 (inline) 84ms 0.56% 84.93% 84ms 0.56% H5VM_chunk_index_scaled 51ms 0.34% 85.27% 83ms 0.55% H5SL_search 3ms 0.02% 85.29% 82ms 0.55% MPI_Type_create_hindexed 78ms 0.52% 85.81% 78ms 0.52% H5VM_array_offset_pre 62ms 0.41% 86.22% 76ms 0.51% AbstractParameterisedSystem::GetAnyVariable 44ms 0.29% 86.52% 76ms 0.51% TimeStepper::AdvanceOneTimeStep