File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12747ms, 85.85% of 14848ms total Dropped 767 nodes (cum <= 74.24ms) flat flat% sum% cum cum% 0 0% 0% 14841ms 100% __libc_start_call_main 0 0% 0% 14841ms 100% __libc_start_main_impl 0 0% 0% 14841ms 100% _start 0 0% 0% 14838ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14838ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14838ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14838ms 99.93% main 0 0% 0% 14801ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14801ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14801ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14778ms 99.53% AbstractCardiacProblem::Solve 2ms 0.013% 0.034% 11530ms 77.65% AbstractDynamicLinearPdeSolver::Solve 122ms 0.82% 0.86% 9214ms 62.06% AbstractCardiacTissue::SolveCellSystems 178ms 1.20% 2.05% 5616ms 37.82% AbstractCardiacCell::ComputeExceptVoltage 108ms 0.73% 2.78% 4890ms 32.93% AbstractOneStepIvpOdeSolver::InternalSolve 190ms 1.28% 4.06% 4229ms 28.48% EulerIvpOdeSolver::CalculateNextYValue 912ms 6.14% 10.20% 3977ms 26.78% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1784ms 12.02% 22.22% 3644ms 24.54% __GI___exp 2ms 0.013% 22.23% 3180ms 21.42% MonodomainProblem::WriteOneStep 2ms 0.013% 22.25% 3029ms 20.40% Hdf5DataWriter::PutVector 1ms 0.0067% 22.25% 3018ms 20.33% H5Dwrite 3ms 0.02% 22.27% 3001ms 20.21% H5D__write 95ms 0.64% 22.91% 2633ms 17.73% AbstractCardiacTissue::UpdateCaches (inline) 822ms 5.54% 28.45% 2501ms 16.84% CellLuoRudy1991FromCellML::GetIIonic 0 0% 28.45% 1783ms 12.01% H5D__chunk_collective_write 11ms 0.074% 28.52% 1783ms 12.01% H5F_set_coll_metadata_reads 1640ms 11.05% 39.57% 1777ms 11.97% __ieee754_exp_fma 12ms 0.081% 39.65% 1605ms 10.81% H5FD_s3comms_uriencode 3ms 0.02% 39.67% 1541ms 10.38% LinearSystem::Solve 0 0% 39.67% 1392ms 9.38% KSPSolve 3ms 0.02% 39.69% 1392ms 9.38% KSPSolve_Private 1ms 0.0067% 39.70% 1379ms 9.29% KSPSolve_CG 3ms 0.02% 39.72% 1228ms 8.27% H5F_block_write 3ms 0.02% 39.74% 1225ms 8.25% H5PB_write 2ms 0.013% 39.75% 1222ms 8.23% H5F__accum_write 0 0% 39.75% 1220ms 8.22% H5FD_write 59ms 0.4% 40.15% 1216ms 8.19% 4ms 0.027% 40.17% 1148ms 7.73% H5D__mpio_select_write 5ms 0.034% 40.21% 1110ms 7.48% H5D__chunk_cacheable 1ms 0.0067% 40.21% 1030ms 6.94% PMPI_File_write_at_all 992ms 6.68% 46.90% 996ms 6.71% __GI_pwritev64 404ms 2.72% 49.62% 981ms 6.61% H5S_select_iterate 8ms 0.054% 49.67% 856ms 5.77% std::pow (inline) 81ms 0.55% 50.22% 847ms 5.70% __pow 82ms 0.55% 50.77% 766ms 5.16% __ieee754_pow_fma 334ms 2.25% 53.02% 750ms 5.05% MonodomainSolver::SetupLinearSystem 4ms 0.027% 53.04% 746ms 5.02% PCApply 0 0% 53.04% 736ms 4.96% PCApply_BJacobi_Singleblock 2ms 0.013% 53.06% 704ms 4.74% KSPSolve_PREONLY 4ms 0.027% 53.08% 699ms 4.71% MatSolve 0 0% 53.08% 699ms 4.71% PCApply_ICC 683ms 4.60% 57.68% 695ms 4.68% MatSolve_SeqSBAIJ_1_NaturalOrdering 302ms 2.03% 59.72% 651ms 4.38% CellLuoRudy1991FromCellML::VerifyStateVariables 3ms 0.02% 59.74% 640ms 4.31% MatMult 635ms 4.28% 64.02% 637ms 4.29% MatMult_SeqAIJ 57ms 0.38% 64.40% 594ms 4.00% H5D__chunk_set_sizes 0 0% 64.40% 506ms 3.41% KSP_PCApply.lto_priv.7 50ms 0.34% 64.74% 455ms 3.06% H5S_mpio_space_type 352ms 2.37% 67.11% 352ms 2.37% log_inline (inline) 302ms 2.03% 69.14% 303ms 2.04% exp_inline (inline) 3ms 0.02% 69.16% 284ms 1.91% KSPConvergedDefault 0 0% 69.16% 241ms 1.62% KSP_PCApply 123ms 0.83% 69.99% 235ms 1.58% TimeStepper::TimeStepper 54ms 0.36% 70.35% 213ms 1.43% __GI___libc_malloc 77ms 0.52% 70.87% 211ms 1.42% AbstractCardiacCell::SetVoltage (partial-inline) 150ms 1.01% 71.88% 191ms 1.29% _int_malloc 13ms 0.088% 71.97% 179ms 1.21% H5VM_chunk_index 7ms 0.047% 72.02% 166ms 1.12% ompi_datatype_create 92ms 0.62% 72.64% 163ms 1.10% top12 (inline) 162ms 1.09% 73.73% 162ms 1.09% [libchaste_heart.so] 161ms 1.08% 74.81% 161ms 1.08% std::isinf (inline) 112ms 0.75% 75.57% 154ms 1.04% AbstractOneStepIvpOdeSolver::Solve 1ms 0.0067% 75.57% 149ms 1.00% Hdf5DataWriter::PutUnlimitedVariable 137ms 0.92% 76.50% 137ms 0.92% ddot_ 19ms 0.13% 76.62% 133ms 0.9% H5S_set_version 7ms 0.047% 76.67% 131ms 0.88% ompi_datatype_destroy 129ms 0.87% 77.54% 129ms 0.87% TimeStepper::CalculateNextTime 6ms 0.04% 77.58% 127ms 0.86% MPI_Type_free 30ms 0.2% 77.78% 126ms 0.85% __GI___libc_free 112ms 0.75% 78.54% 124ms 0.84% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 4ms 0.027% 78.56% 124ms 0.84% PMPI_File_set_view 124ms 0.84% 79.40% 124ms 0.84% __ieee754_log_fma 62ms 0.42% 79.82% 124ms 0.84% std::__cxx11::basic_string::basic_string 68ms 0.46% 80.27% 123ms 0.83% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 9ms 0.061% 80.33% 122ms 0.82% PMPI_Type_create_resized 33ms 0.22% 80.56% 116ms 0.78% ompi_datatype_release_args 5ms 0.034% 80.59% 116ms 0.78% ompi_info_register_framework_params 53ms 0.36% 80.95% 114ms 0.77% H5VM_array_calc 56ms 0.38% 81.32% 112ms 0.75% H5S_hyper_add_span_element 100ms 0.67% 82.00% 108ms 0.73% AbstractParameterisedSystem::SetAnyVariable 0 0% 82.00% 108ms 0.73% VecDuplicate 3ms 0.02% 82.02% 108ms 0.73% VecDuplicate_MPI 106ms 0.71% 82.73% 106ms 0.71% __memcpy_avx_unaligned_erms 0 0% 82.73% 100ms 0.67% ompi_datatype_duplicate 1ms 0.0067% 82.74% 98ms 0.66% VecTDot 38ms 0.26% 82.99% 96ms 0.65% _int_free 0 0% 82.99% 95ms 0.64% VecTDot_Seq 3ms 0.02% 83.01% 95ms 0.64% VecXDot_Seq_Private.constprop.0 4ms 0.027% 83.04% 89ms 0.6% VecNorm 86ms 0.58% 83.62% 86ms 0.58% H5VM_array_offset_pre 27ms 0.18% 83.80% 85ms 0.57% __libc_calloc 52ms 0.35% 84.15% 83ms 0.56% TimeStepper::AdvanceOneTimeStep 83ms 0.56% 84.71% 83ms 0.56% [libm.so.6] 81ms 0.55% 85.26% 81ms 0.55% H5VM_chunk_index_scaled 1ms 0.0067% 85.26% 79ms 0.53% opal_datatype_create_desc 11ms 0.074% 85.34% 79ms 0.53% std::vector::_M_assign_aux (inline) 0 0% 85.34% 79ms 0.53% std::vector::assign (inline) 1ms 0.0067% 85.34% 77ms 0.52% VecNorm_Seq 75ms 0.51% 85.85% 75ms 0.51% asuint64 (inline)