File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 399ms, 88.08% of 453ms total Dropped 175 nodes (cum <= 2.27ms) flat flat% sum% cum cum% 0 0% 0% 446ms 98.45% __libc_start_call_main 0 0% 0% 446ms 98.45% __libc_start_main_impl 0 0% 0% 446ms 98.45% _start 0 0% 0% 443ms 97.79% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 443ms 97.79% CxxTest::TestRunner::runAllTests 0 0% 0% 443ms 97.79% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 443ms 97.79% main 0 0% 0% 408ms 90.07% CxxTest::RealTestDescription::run 0 0% 0% 408ms 90.07% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 408ms 90.07% CxxTest::TestRunner::runTest (inline) 0 0% 0% 408ms 90.07% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 408ms 90.07% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 404ms 89.18% AbstractCardiacProblem::Solve 0 0% 0% 402ms 88.74% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 351ms 77.48% LinearSystem::Solve 0 0% 0% 350ms 77.26% KSPSolve 0 0% 0% 350ms 77.26% KSPSolve_CG 0 0% 0% 350ms 77.26% KSPSolve_Private 0 0% 0% 192ms 42.38% KSP_PCApply.lto_priv.7 0 0% 0% 183ms 40.40% PCApply 0 0% 0% 183ms 40.40% PCApply_BJacobi_Singleblock 0 0% 0% 154ms 34.00% KSPSolve_PREONLY (partial-inline) 0 0% 0% 144ms 31.79% MatSolve 142ms 31.35% 31.35% 144ms 31.79% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 31.35% 144ms 31.79% PCApply_ICC 0 0% 31.35% 89ms 19.65% MatMult 4ms 0.88% 32.23% 89ms 19.65% MatMult_SeqAIJ (partial-inline) 85ms 18.76% 50.99% 88ms 19.43% MatMult_SeqAIJ_Inode (inline) 0 0% 50.99% 44ms 9.71% AbstractCardiacTissue::SolveCellSystems 38ms 8.39% 59.38% 38ms 8.39% ddot_ 0 0% 59.38% 32ms 7.06% AbstractCardiacCell::ComputeExceptVoltage 0 0% 59.38% 32ms 7.06% CxxTest::RealWorldDescription::setUp 0 0% 59.38% 32ms 7.06% PetscInitialize 0 0% 59.38% 32ms 7.06% PetscSetup::setUpWorld 0 0% 59.38% 32ms 7.06% PetscSetupUtils::CommonSetup 0 0% 59.38% 32ms 7.06% PetscSetupUtils::InitialisePetsc 0 0% 59.38% 31ms 6.84% PMPI_Init_thread 0 0% 59.38% 31ms 6.84% ompi_mpi_init 0 0% 59.38% 30ms 6.62% AbstractOneStepIvpOdeSolver::InternalSolve 2ms 0.44% 59.82% 28ms 6.18% EulerIvpOdeSolver::CalculateNextYValue 0 0% 59.82% 27ms 5.96% VecTDot 0 0% 59.82% 27ms 5.96% VecTDot_Seq 1ms 0.22% 60.04% 27ms 5.96% VecXDot_Seq_Private.constprop.0 2ms 0.44% 60.49% 26ms 5.74% 6ms 1.32% 61.81% 26ms 5.74% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 61.81% 26ms 5.74% MatNullSpaceRemove 15ms 3.31% 65.12% 23ms 5.08% __GI___exp 0 0% 65.12% 21ms 4.64% orte_init 0 0% 65.12% 16ms 3.53% VecMDot 16ms 3.53% 68.65% 16ms 3.53% VecMDot_Seq 0 0% 68.65% 16ms 3.53% VecMXDot_Private 2ms 0.44% 69.09% 16ms 3.53% VecNorm 1ms 0.22% 69.32% 14ms 3.09% VecNorm_Seq 0 0% 69.32% 14ms 3.09% mca_base_framework_open 0 0% 69.32% 13ms 2.87% VecAYPX 13ms 2.87% 72.19% 13ms 2.87% VecAYPX_Seq 0 0% 72.19% 13ms 2.87% hwloc_topology_load 0 0% 72.19% 12ms 2.65% VecAXPY 0 0% 72.19% 12ms 2.65% VecAXPY_Seq 0 0% 72.19% 12ms 2.65% VecDuplicate 1ms 0.22% 72.41% 12ms 2.65% VecDuplicate_Seq 0 0% 72.41% 12ms 2.65% __GI__dl_catch_exception 0 0% 72.41% 12ms 2.65% _dl_catch_error 0 0% 72.41% 12ms 2.65% _dlerror_run 12ms 2.65% 75.06% 12ms 2.65% daxpy_ 0 0% 75.06% 12ms 2.65% hwloc_linux_get_tid_last_cpu_location 0 0% 75.06% 12ms 2.65% mca_base_framework_components_register 0 0% 75.06% 12ms 2.65% mca_base_framework_register 0 0% 75.06% 12ms 2.65% opal_stackframe_output 0 0% 75.06% 11ms 2.43% KSP_PCApply (partial-inline) 0 0% 75.06% 10ms 2.21% VecMAXPY 9ms 1.99% 77.04% 10ms 2.21% VecMAXPY_Seq 0 0% 77.04% 10ms 2.21% ___dlopen 0 0% 77.04% 10ms 2.21% _dl_open 0 0% 77.04% 10ms 2.21% dl_open_worker 0 0% 77.04% 10ms 2.21% dl_open_worker_begin 0 0% 77.04% 10ms 2.21% dlopen_doit 0 0% 77.04% 10ms 2.21% dlopen_implementation (inline) 0 0% 77.04% 9ms 1.99% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 77.04% 9ms 1.99% mca_base_component_find 0 0% 77.04% 9ms 1.99% mca_base_component_repository_open 4ms 0.88% 77.92% 8ms 1.77% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.44% 78.37% 8ms 1.77% VecSetType 5ms 1.10% 79.47% 7ms 1.55% __ieee754_exp_fma 0 0% 79.47% 7ms 1.55% _dl_init 0 0% 79.47% 7ms 1.55% _dl_start_user 0 0% 79.47% 7ms 1.55% call_init (inline) 0 0% 79.47% 6ms 1.32% PetscMemcpy (inline) 6ms 1.32% 80.79% 6ms 1.32% __memcpy_avx_unaligned_erms 2ms 0.44% 81.24% 6ms 1.32% _dl_map_object 1ms 0.22% 81.46% 5ms 1.10% PetscMallocA 0 0% 81.46% 5ms 1.10% PetscMemzero (inline) 5ms 1.10% 82.56% 5ms 1.10% __memset_avx2_unaligned_erms 0 0% 82.56% 5ms 1.10% _dl_lookup_symbol_x 0 0% 82.56% 5ms 1.10% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.56% 5ms 1.10% boost::serialization::singleton::get_instance 0 0% 82.56% 5ms 1.10% boost::serialization::void_cast_detail::void_caster::recursive_register 4ms 0.88% 83.44% 5ms 1.10% do_lookup_x 0 0% 83.44% 4ms 0.88% AbstractCardiacProblem::Initialise 1ms 0.22% 83.66% 4ms 0.88% BidomainSolver::SetupLinearSystem 0 0% 83.66% 4ms 0.88% PetscMallocAlign (partial-inline) 0 0% 83.66% 4ms 0.88% VecCopy 0 0% 83.66% 4ms 0.88% VecCopy_Seq (partial-inline) 0 0% 83.66% 4ms 0.88% VecCreate_Seq 4ms 0.88% 84.55% 4ms 0.88% __GI___libc_read 0 0% 84.55% 4ms 0.88% _dl_map_object_deps 0 0% 84.55% 4ms 0.88% _dl_open_relocate_one_object (inline) 0 0% 84.55% 4ms 0.88% _dl_relocate_object 2ms 0.44% 84.99% 4ms 0.88% _dl_runtime_resolve_xsavec 0 0% 84.99% 4ms 0.88% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 1ms 0.22% 85.21% 4ms 0.88% elf_dynamic_do_Rela (inline) 0 0% 85.21% 4ms 0.88% mca_base_framework_components_open 0 0% 85.21% 4ms 0.88% opal_hwloc_base_get_topology 0 0% 85.21% 4ms 0.88% openaux 0 0% 85.21% 4ms 0.88% orte_ess_base_proc_binding 4ms 0.88% 86.09% 4ms 0.88% strcmp 0 0% 86.09% 3ms 0.66% CxxTest::RealWorldDescription::tearDown 0 0% 86.09% 3ms 0.66% PetscFinalize 2ms 0.44% 86.53% 3ms 0.66% PetscLayoutSetUp 0 0% 86.53% 3ms 0.66% PetscSetup::tearDownWorld 0 0% 86.53% 3ms 0.66% PetscSetupUtils::CommonFinalize 2ms 0.44% 86.98% 3ms 0.66% VecCreate 0 0% 86.98% 3ms 0.66% VecCreate_Seq_Private 0 0% 86.98% 3ms 0.66% VecSet 0 0% 86.98% 3ms 0.66% VecSet_Seq (partial-inline) 0 0% 86.98% 3ms 0.66% XOpenDisplay 0 0% 86.98% 3ms 0.66% [hwloc_gl.so] 0 0% 86.98% 3ms 0.66% _XConnectXCB 0 0% 86.98% 3ms 0.66% __GI___libc_malloc 0 0% 86.98% 3ms 0.66% __GI_exit 0 0% 86.98% 3ms 0.66% __cxa_finalize 3ms 0.66% 87.64% 3ms 0.66% __libc_connect 0 0% 87.64% 3ms 0.66% __run_exit_handlers 0 0% 87.64% 3ms 0.66% _dl_call_fini 0 0% 87.64% 3ms 0.66% _dl_fini 1ms 0.22% 87.86% 3ms 0.66% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.22% 88.08% 3ms 0.66% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 88.08% 3ms 0.66% elf_machine_rela (inline) 0 0% 88.08% 3ms 0.66% mca_base_component_repository_release 0 0% 88.08% 3ms 0.66% mca_topo_base_dist_graph_neighbors_count 0 0% 88.08% 3ms 0.66% ompi_mpi_finalize 0 0% 88.08% 3ms 0.66% resolve_map (inline) 0 0% 88.08% 3ms 0.66% xcb_connect_to_display_with_auth_info