File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 110056ms, 91.66% of 120074ms total Dropped 1138 nodes (cum <= 600.37ms) flat flat% sum% cum cum% 0 0% 0% 120056ms 100% __libc_start_call_main 0 0% 0% 120056ms 100% __libc_start_main_impl 0 0% 0% 120056ms 100% _start 0 0% 0% 120053ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120053ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120053ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120053ms 100% main 0 0% 0% 120018ms 100% AbstractConvergenceTester::Converge 0 0% 0% 120018ms 100% CxxTest::RealTestDescription::run 0 0% 0% 120018ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120018ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120018ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120018ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0033% 0.0033% 118750ms 98.90% AbstractCardiacProblem::Solve 8ms 0.0067% 0.01% 117850ms 98.15% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0042% 0.014% 66483ms 55.37% LinearSystem::Solve 2ms 0.0017% 0.016% 65994ms 54.96% KSPSolve 11ms 0.0092% 0.025% 65993ms 54.96% KSPSolve_Private 1ms 0.00083% 0.026% 65530ms 54.57% KSPSolve_SYMMLQ 193ms 0.16% 0.19% 42551ms 35.44% AbstractCardiacTissue::SolveCellSystems 6ms 0.005% 0.19% 37522ms 31.25% PCApply 1ms 0.00083% 0.19% 37507ms 31.24% PCApply_BJacobi_Singleblock 1ms 0.00083% 0.19% 34762ms 28.95% KSPSolve_PREONLY (partial-inline) 1ms 0.00083% 0.19% 33640ms 28.02% PCApply_ICC 5ms 0.0042% 0.2% 33639ms 28.02% MatSolve 33132ms 27.59% 27.79% 33634ms 28.01% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1396ms 1.16% 28.95% 32656ms 27.20% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0017% 28.96% 32324ms 26.92% KSP_PCApply.lto_priv.18 6820ms 5.68% 34.64% 28176ms 23.47% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0067% 34.64% 21980ms 18.31% MatMult 235ms 0.2% 34.84% 21972ms 18.30% MatMult_SeqAIJ (partial-inline) 21456ms 17.87% 52.71% 21970ms 18.30% MatMult_SeqAIJ_Inode (inline) 1982ms 1.65% 54.36% 14638ms 12.19% CardiacNewtonSolver::Solve 311ms 0.26% 54.62% 9074ms 7.56% AbstractCardiacTissue::UpdateCaches (inline) 1959ms 1.63% 56.25% 8585ms 7.15% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4380ms 3.65% 59.90% 8538ms 7.11% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1039ms 0.87% 60.76% 7715ms 6.43% BidomainSolver::SetupLinearSystem 1104ms 0.92% 61.68% 7350ms 6.12% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00083% 61.68% 7137ms 5.94% KSP_PCApply (partial-inline) 4ms 0.0033% 61.68% 6543ms 5.45% KSPConvergedDefault 5964ms 4.97% 66.65% 5964ms 4.97% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3822ms 3.18% 69.83% 3862ms 3.22% __ieee754_log_fma 0 0% 69.83% 3697ms 3.08% boost::numeric::ublas::norm_inf (inline) 2543ms 2.12% 71.95% 3697ms 3.08% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 71.95% 3697ms 3.08% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 71.95% 3697ms 3.08% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 5ms 0.0042% 71.96% 3427ms 2.85% MatNullSpaceRemove 3243ms 2.70% 74.66% 3243ms 2.70% __memcpy_avx_unaligned_erms 31ms 0.026% 74.68% 3236ms 2.70% std::pow (inline) 0 0% 74.68% 3210ms 2.67% PetscMemcpy (inline) 374ms 0.31% 74.99% 3204ms 2.67% __pow 1757ms 1.46% 76.46% 2904ms 2.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 372ms 0.31% 76.77% 2815ms 2.34% __ieee754_pow_fma 13ms 0.011% 76.78% 2737ms 2.28% VecCopy 2724ms 2.27% 79.05% 2724ms 2.27% ddot_ 6ms 0.005% 79.05% 2720ms 2.27% VecCopy_Seq (partial-inline) 17ms 0.014% 79.07% 2571ms 2.14% VecAXPY 8ms 0.0067% 79.07% 2554ms 2.13% VecAXPY_Seq 2535ms 2.11% 81.18% 2535ms 2.11% daxpy_ 9ms 0.0075% 81.19% 2222ms 1.85% VecDot 5ms 0.0042% 81.20% 2213ms 1.84% VecDot_Seq 3ms 0.0025% 81.20% 2208ms 1.84% VecXDot_Seq_Private.constprop.0 1ms 0.00083% 81.20% 2088ms 1.74% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00083% 81.20% 2012ms 1.68% VecMDot 11ms 0.0092% 81.21% 2011ms 1.67% VecMXDot_Private 1987ms 1.65% 82.86% 1992ms 1.66% VecMDot_Seq 36ms 0.03% 82.89% 1754ms 1.46% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1625ms 1.35% 84.25% 1684ms 1.40% exp_inline (inline) 1468ms 1.22% 85.47% 1468ms 1.22% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 85.47% 1429ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 9ms 0.0075% 85.48% 1410ms 1.17% VecMAXPY 1393ms 1.16% 86.64% 1401ms 1.17% VecMAXPY_Seq 1128ms 0.94% 87.58% 1128ms 0.94% __memset_avx2_unaligned_erms 0 0% 87.58% 1117ms 0.93% PetscMemzero (inline) 0 0% 87.58% 1109ms 0.92% CuboidMeshConstructor::Construct 0 0% 87.58% 1108ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00083% 87.58% 1108ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 2ms 0.0017% 87.58% 1103ms 0.92% boost::numeric::ublas::matrix_assign (inline) 206ms 0.17% 87.75% 1096ms 0.91% boost::numeric::ublas::indexing_matrix_assign 0 0% 87.75% 1062ms 0.88% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.75% 1062ms 0.88% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.75% 1062ms 0.88% boost_numeric_ublas_abs (inline) 1062ms 0.88% 88.64% 1062ms 0.88% std::abs (inline) 792ms 0.66% 89.29% 1041ms 0.87% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 2ms 0.0017% 89.30% 1010ms 0.84% Element::Element 4ms 0.0033% 89.30% 995ms 0.83% AbstractTetrahedralElement::CalculateJacobian 8ms 0.0067% 89.31% 991ms 0.83% VecScale 3ms 0.0025% 89.31% 983ms 0.82% VecScale_Seq 977ms 0.81% 90.12% 977ms 0.81% dscal_ 1ms 0.00083% 90.12% 952ms 0.79% AbstractTetrahedralElement::AbstractTetrahedralElement 0 0% 90.12% 933ms 0.78% VecDuplicate 2ms 0.0017% 90.13% 856ms 0.71% BidomainAssembler::ComputeMatrixTerm 9ms 0.0075% 90.13% 845ms 0.7% boost::numeric::ublas::c_matrix::c_matrix (inline) 841ms 0.7% 90.83% 841ms 0.7% [libchaste_heart.so] 0 0% 90.83% 826ms 0.69% BidomainProblem::WriteOneStep 1ms 0.00083% 90.83% 791ms 0.66% AbstractBidomainSolver::FinaliseLinearSystem 13ms 0.011% 90.84% 790ms 0.66% PetscMallocA 229ms 0.19% 91.04% 788ms 0.66% AbstractBidomainSolver::CheckCompatibilityCondition 10ms 0.0083% 91.04% 777ms 0.65% PetscMallocAlign (partial-inline) 3ms 0.0025% 91.05% 775ms 0.65% VecNorm 3ms 0.0025% 91.05% 763ms 0.64% VecNorm_Seq 730ms 0.61% 91.66% 730ms 0.61% log_inline (inline) 0 0% 91.66% 659ms 0.55% AbstractFeAssemblerInterface::Assemble (inline)