File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 424ms, 87.60% of 484ms total Dropped 223 nodes (cum <= 2.42ms) flat flat% sum% cum cum% 0 0% 0% 476ms 98.35% __libc_start_call_main 0 0% 0% 476ms 98.35% __libc_start_main_impl 0 0% 0% 476ms 98.35% _start 0 0% 0% 473ms 97.73% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 473ms 97.73% CxxTest::TestRunner::runAllTests 0 0% 0% 473ms 97.73% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 473ms 97.73% main 0 0% 0% 431ms 89.05% CxxTest::RealTestDescription::run 0 0% 0% 431ms 89.05% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 431ms 89.05% CxxTest::TestRunner::runTest (inline) 0 0% 0% 431ms 89.05% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 431ms 89.05% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 427ms 88.22% AbstractCardiacProblem::Solve 0 0% 0% 427ms 88.22% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 377ms 77.89% LinearSystem::Solve 0 0% 0% 374ms 77.27% KSPSolve 0 0% 0% 374ms 77.27% KSPSolve_CG 2ms 0.41% 0.41% 374ms 77.27% KSPSolve_Private 0 0% 0.41% 231ms 47.73% KSP_PCApply.lto_priv.7 0 0% 0.41% 225ms 46.49% PCApply 0 0% 0.41% 225ms 46.49% PCApply_BJacobi_Singleblock 0 0% 0.41% 201ms 41.53% KSPSolve_PREONLY (partial-inline) 0 0% 0.41% 184ms 38.02% MatSolve 182ms 37.60% 38.02% 184ms 38.02% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 38.02% 184ms 38.02% PCApply_ICC 0 0% 38.02% 79ms 16.32% MatMult 1ms 0.21% 38.22% 79ms 16.32% MatMult_SeqAIJ 78ms 16.12% 54.34% 78ms 16.12% MatMult_SeqAIJ_Inode (inline) 44ms 9.09% 63.43% 44ms 9.09% ddot_ 0 0% 63.43% 41ms 8.47% AbstractCardiacTissue::SolveCellSystems 0 0% 63.43% 39ms 8.06% CxxTest::RealWorldDescription::setUp 0 0% 63.43% 39ms 8.06% PetscInitialize 0 0% 63.43% 39ms 8.06% PetscSetup::setUpWorld 0 0% 63.43% 39ms 8.06% PetscSetupUtils::CommonSetup 0 0% 63.43% 39ms 8.06% PetscSetupUtils::InitialisePetsc 0 0% 63.43% 38ms 7.85% PMPI_Init_thread 0 0% 63.43% 38ms 7.85% ompi_mpi_init 0 0% 63.43% 36ms 7.44% MatNullSpaceRemove 1ms 0.21% 63.64% 34ms 7.02% VecTDot 0 0% 63.64% 33ms 6.82% VecTDot_Seq 1ms 0.21% 63.84% 33ms 6.82% VecXDot_Seq_Private.constprop.0 0 0% 63.84% 31ms 6.40% 0 0% 63.84% 24ms 4.96% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.21% 64.05% 23ms 4.75% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 64.05% 22ms 4.55% orte_init 0 0% 64.05% 20ms 4.13% KSP_PCApply (partial-inline) 0 0% 64.05% 20ms 4.13% VecMDot 1ms 0.21% 64.26% 20ms 4.13% VecMXDot_Private 0 0% 64.26% 20ms 4.13% __GI__dl_catch_exception 0 0% 64.26% 20ms 4.13% _dl_catch_error 0 0% 64.26% 20ms 4.13% _dlerror_run 19ms 3.93% 68.18% 19ms 3.93% VecMDot_Seq 0 0% 68.18% 18ms 3.72% mca_base_framework_open 0 0% 68.18% 18ms 3.72% opal_stackframe_output 1ms 0.21% 68.39% 17ms 3.51% EulerIvpOdeSolver::CalculateNextYValue 0 0% 68.39% 17ms 3.51% ___dlopen 0 0% 68.39% 17ms 3.51% _dl_open 0 0% 68.39% 17ms 3.51% dl_open_worker 0 0% 68.39% 17ms 3.51% dlopen_doit 0 0% 68.39% 17ms 3.51% dlopen_implementation (inline) 0 0% 68.39% 17ms 3.51% mca_base_framework_register 2ms 0.41% 68.80% 16ms 3.31% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 68.80% 16ms 3.31% VecMAXPY 15ms 3.10% 71.90% 16ms 3.31% VecMAXPY_Seq 0 0% 71.90% 16ms 3.31% mca_base_framework_components_register 0 0% 71.90% 15ms 3.10% mca_base_component_find 0 0% 71.90% 15ms 3.10% mca_base_component_repository_open 0 0% 71.90% 14ms 2.89% VecNorm 0 0% 71.90% 14ms 2.89% VecNorm_Seq 0 0% 71.90% 14ms 2.89% hwloc_topology_load 2ms 0.41% 72.31% 13ms 2.69% AbstractCardiacTissue::UpdateCaches (inline) 9ms 1.86% 74.17% 13ms 2.69% __GI___exp 0 0% 74.17% 13ms 2.69% _dl_init 0 0% 74.17% 13ms 2.69% call_init (inline) 0 0% 74.17% 13ms 2.69% hwloc_linux_get_tid_last_cpu_location 4ms 0.83% 75.00% 11ms 2.27% CellLuoRudy1991FromCellML::GetIIonic 0 0% 75.00% 11ms 2.27% VecAYPX 11ms 2.27% 77.27% 11ms 2.27% VecAYPX_Seq 0 0% 77.27% 11ms 2.27% dl_open_worker_begin 0 0% 77.27% 8ms 1.65% _dl_map_object 0 0% 77.27% 8ms 1.65% mca_base_framework_components_open 1ms 0.21% 77.48% 7ms 1.45% BidomainSolver::SetupLinearSystem 0 0% 77.48% 7ms 1.45% _dl_start_user 0 0% 77.48% 7ms 1.45% mca_topo_base_dist_graph_neighbors_count 0 0% 77.48% 6ms 1.24% VecDuplicate 2ms 0.41% 77.89% 6ms 1.24% __pow 0 0% 77.89% 6ms 1.24% std::pow (inline) 1ms 0.21% 78.10% 5ms 1.03% VecAXPY 0 0% 78.10% 5ms 1.03% VecDuplicate_Seq 5ms 1.03% 79.13% 5ms 1.03% __GI___clock_nanosleep 0 0% 79.13% 5ms 1.03% __GI___nanosleep 0 0% 79.13% 5ms 1.03% _dl_map_object_from_fd 0 0% 79.13% 5ms 1.03% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 79.13% 5ms 1.03% boost::serialization::singleton::get_instance 0 0% 79.13% 5ms 1.03% opal_hwloc_base_get_topology 0 0% 79.13% 5ms 1.03% orte_ess_base_proc_binding 0 0% 79.13% 5ms 1.03% usleep 0 0% 79.13% 4ms 0.83% AbstractCardiacProblem::Initialise 2ms 0.41% 79.55% 4ms 0.83% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.21% 79.75% 4ms 0.83% PetscMallocA 0 0% 79.75% 4ms 0.83% PetscMemcpy (inline) 0 0% 79.75% 4ms 0.83% VecAXPY_Seq 1ms 0.21% 79.96% 4ms 0.83% __cxa_finalize 4ms 0.83% 80.79% 4ms 0.83% __ieee754_exp_fma 0 0% 80.79% 4ms 0.83% __ieee754_pow_fma 4ms 0.83% 81.61% 4ms 0.83% __libc_openat64 4ms 0.83% 82.44% 4ms 0.83% __memcpy_avx_unaligned_erms 0 0% 82.44% 4ms 0.83% _dl_call_fini 3ms 0.62% 83.06% 4ms 0.83% _int_malloc 4ms 0.83% 83.88% 4ms 0.83% daxpy_ 4ms 0.83% 84.71% 4ms 0.83% log_inline (inline) 0 0% 84.71% 4ms 0.83% mca_base_component_repository_release 0 0% 84.71% 3ms 0.62% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 84.71% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 84.71% 3ms 0.62% KSPConvergedDefault 0 0% 84.71% 3ms 0.62% PetscFinalize 0 0% 84.71% 3ms 0.62% PetscMallocAlign 0 0% 84.71% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 84.71% 3ms 0.62% PetscSetupUtils::CommonFinalize 2ms 0.41% 85.12% 3ms 0.62% TimeStepper::TimeStepper 0 0% 85.12% 3ms 0.62% VecCreate 0 0% 85.12% 3ms 0.62% XOpenDisplay 0 0% 85.12% 3ms 0.62% [hwloc_gl.so] 3ms 0.62% 85.74% 3ms 0.62% [libchaste_heart.so] 0 0% 85.74% 3ms 0.62% _XConnectXCB 0 0% 85.74% 3ms 0.62% __GI___libc_malloc 3ms 0.62% 86.36% 3ms 0.62% __GI___libc_read 0 0% 86.36% 3ms 0.62% __GI_exit 0 0% 86.36% 3ms 0.62% __dlclose 0 0% 86.36% 3ms 0.62% __run_exit_handlers 0 0% 86.36% 3ms 0.62% _dl_close 1ms 0.21% 86.57% 3ms 0.62% _dl_close_worker (inline) 0 0% 86.57% 3ms 0.62% _dl_fini 0 0% 86.57% 3ms 0.62% _dl_map_object_deps 1ms 0.21% 86.78% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 86.78% 3ms 0.62% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 86.78% 3ms 0.62% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 86.78% 3ms 0.62% mca_base_components_close 1ms 0.21% 86.98% 3ms 0.62% mca_base_var_cache_files 0 0% 86.98% 3ms 0.62% ompi_mpi_finalize 0 0% 86.98% 3ms 0.62% openaux 3ms 0.62% 87.60% 3ms 0.62% strcmp 0 0% 87.60% 3ms 0.62% xcb_connect_to_display_with_auth_info