File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116959ms, 91.84% of 127352ms total Dropped 1178 nodes (cum <= 636.76ms) flat flat% sum% cum cum% 0 0% 0% 127330ms 100% __libc_start_call_main 0 0% 0% 127330ms 100% __libc_start_main_impl 0 0% 0% 127330ms 100% _start 0 0% 0% 127326ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 127326ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 127326ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 127326ms 100% main 0 0% 0% 127286ms 99.95% AbstractConvergenceTester::Converge 0 0% 0% 127286ms 99.95% CxxTest::RealTestDescription::run 0 0% 0% 127286ms 99.95% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 127286ms 99.95% CxxTest::TestRunner::runTest (inline) 0 0% 0% 127286ms 99.95% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 127286ms 99.95% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 8ms 0.0063% 0.0063% 126100ms 99.02% AbstractCardiacProblem::Solve 7ms 0.0055% 0.012% 125261ms 98.36% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0031% 0.015% 68968ms 54.16% LinearSystem::Solve 3ms 0.0024% 0.017% 68468ms 53.76% KSPSolve 8ms 0.0063% 0.024% 68465ms 53.76% KSPSolve_Private 16ms 0.013% 0.036% 68150ms 53.51% KSPSolve_SYMMLQ 290ms 0.23% 0.26% 47130ms 37.01% AbstractCardiacTissue::SolveCellSystems 2ms 0.0016% 0.27% 39625ms 31.11% PCApply 2ms 0.0016% 0.27% 39613ms 31.11% PCApply_BJacobi_Singleblock 4ms 0.0031% 0.27% 37109ms 29.14% KSPSolve_PREONLY (partial-inline) 745ms 0.58% 0.86% 36881ms 28.96% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 0.86% 36001ms 28.27% PCApply_ICC 6ms 0.0047% 0.86% 35999ms 28.27% MatSolve 35545ms 27.91% 28.77% 35993ms 28.26% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 3ms 0.0024% 28.77% 34154ms 26.82% KSP_PCApply.lto_priv.18 7742ms 6.08% 34.85% 32828ms 25.78% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0063% 34.86% 22684ms 17.81% MatMult 332ms 0.26% 35.12% 22676ms 17.81% MatMult_SeqAIJ (partial-inline) 22120ms 17.37% 52.49% 22672ms 17.80% MatMult_SeqAIJ_Inode (inline) 2269ms 1.78% 54.27% 16889ms 13.26% CardiacNewtonSolver::Solve 5523ms 4.34% 58.61% 10032ms 7.88% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1514ms 1.19% 59.80% 9235ms 7.25% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 226ms 0.18% 59.97% 9179ms 7.21% AbstractCardiacTissue::UpdateCaches (inline) 1740ms 1.37% 61.34% 8580ms 6.74% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1236ms 0.97% 62.31% 8106ms 6.37% BidomainSolver::SetupLinearSystem 7426ms 5.83% 68.14% 7426ms 5.83% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 68.14% 7372ms 5.79% KSP_PCApply (partial-inline) 3ms 0.0024% 68.14% 6962ms 5.47% KSPConvergedDefault 4165ms 3.27% 71.42% 4259ms 3.34% __ieee754_log_fma 0 0% 71.42% 4114ms 3.23% boost::numeric::ublas::norm_inf (inline) 2850ms 2.24% 73.65% 4114ms 3.23% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 73.65% 4114ms 3.23% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 73.65% 4114ms 3.23% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 30ms 0.024% 73.68% 3449ms 2.71% std::pow (inline) 3428ms 2.69% 76.37% 3428ms 2.69% ddot_ 10ms 0.0079% 76.38% 3419ms 2.68% MatNullSpaceRemove 417ms 0.33% 76.70% 3410ms 2.68% __pow 2005ms 1.57% 78.28% 3109ms 2.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 402ms 0.32% 78.59% 2959ms 2.32% __ieee754_pow_fma 2802ms 2.20% 80.79% 2802ms 2.20% __memcpy_avx_unaligned_erms 0 0% 80.79% 2759ms 2.17% PetscMemcpy (inline) 9ms 0.0071% 80.80% 2713ms 2.13% VecDot 0 0% 80.80% 2704ms 2.12% VecDot_Seq 3ms 0.0024% 80.80% 2704ms 2.12% VecXDot_Seq_Private.constprop.0 23ms 0.018% 80.82% 2346ms 1.84% VecCopy 4ms 0.0031% 80.82% 2323ms 1.82% VecCopy_Seq (partial-inline) 12ms 0.0094% 80.83% 2162ms 1.70% VecAXPY 3ms 0.0024% 80.84% 2154ms 1.69% VecMDot 7ms 0.0055% 80.84% 2151ms 1.69% VecMXDot_Private 3ms 0.0024% 80.84% 2150ms 1.69% VecAXPY_Seq 2131ms 1.67% 82.52% 2136ms 1.68% VecMDot_Seq 2134ms 1.68% 84.19% 2134ms 1.68% daxpy_ 1ms 0.00079% 84.19% 2051ms 1.61% AbstractFeVolumeIntegralAssembler::DoAssemble 34ms 0.027% 84.22% 1749ms 1.37% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1563ms 1.23% 85.45% 1626ms 1.28% exp_inline (inline) 0 0% 85.45% 1405ms 1.10% AbstractFeAssemblerInterface::AssembleMatrix (inline) 3ms 0.0024% 85.45% 1255ms 0.99% VecMAXPY 0 0% 85.45% 1255ms 0.99% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.45% 1255ms 0.99% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.45% 1255ms 0.99% boost_numeric_ublas_abs (inline) 1255ms 0.99% 86.44% 1255ms 0.99% std::abs (inline) 1240ms 0.97% 87.41% 1252ms 0.98% VecMAXPY_Seq 835ms 0.66% 88.07% 1138ms 0.89% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 10ms 0.0079% 88.07% 1116ms 0.88% boost::numeric::ublas::matrix_assign (inline) 238ms 0.19% 88.26% 1101ms 0.86% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.26% 1030ms 0.81% CuboidMeshConstructor::Construct 0 0% 88.26% 1029ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 4ms 0.0031% 88.26% 1029ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 1026ms 0.81% 89.07% 1026ms 0.81% [libchaste_heart.so] 0 0% 89.07% 1020ms 0.8% VecNorm 2ms 0.0016% 89.07% 1010ms 0.79% VecNorm_Seq 2ms 0.0016% 89.07% 935ms 0.73% Element::Element 4ms 0.0031% 89.08% 916ms 0.72% AbstractTetrahedralElement::CalculateJacobian 9ms 0.0071% 89.08% 894ms 0.7% VecScale 890ms 0.7% 89.78% 890ms 0.7% log_inline (inline) 6ms 0.0047% 89.79% 885ms 0.69% VecScale_Seq 7ms 0.0055% 89.79% 881ms 0.69% BidomainAssembler::ComputeMatrixTerm 876ms 0.69% 90.48% 876ms 0.69% dscal_ 3ms 0.0024% 90.48% 869ms 0.68% AbstractTetrahedralElement::AbstractTetrahedralElement 10ms 0.0079% 90.49% 866ms 0.68% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00079% 90.49% 756ms 0.59% BidomainProblem::WriteOneStep 743ms 0.58% 91.07% 743ms 0.58% __memset_avx2_unaligned_erms 739ms 0.58% 91.65% 739ms 0.58% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 91.65% 731ms 0.57% PetscMemzero (inline) 0 0% 91.65% 705ms 0.55% AbstractBidomainSolver::FinaliseLinearSystem 230ms 0.18% 91.83% 704ms 0.55% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.83% 695ms 0.55% VecNorm_MPI 4ms 0.0031% 91.84% 695ms 0.55% VecNorm_MPI_Default.constprop.0 2ms 0.0016% 91.84% 660ms 0.52% VecDuplicate 0 0% 91.84% 646ms 0.51% AbstractFeAssemblerInterface::Assemble (inline)