File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 432ms, 88.71% of 487ms total Dropped 212 nodes (cum <= 2.44ms) flat flat% sum% cum cum% 0 0% 0% 478ms 98.15% __libc_start_call_main 0 0% 0% 478ms 98.15% __libc_start_main_impl 0 0% 0% 478ms 98.15% _start 0 0% 0% 474ms 97.33% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 474ms 97.33% CxxTest::TestRunner::runAllTests 0 0% 0% 474ms 97.33% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 474ms 97.33% main 0 0% 0% 431ms 88.50% CxxTest::RealTestDescription::run 0 0% 0% 431ms 88.50% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 431ms 88.50% CxxTest::TestRunner::runTest (inline) 0 0% 0% 431ms 88.50% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 431ms 88.50% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 426ms 87.47% AbstractCardiacProblem::Solve 0 0% 0% 425ms 87.27% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 378ms 77.62% LinearSystem::Solve 0 0% 0% 377ms 77.41% KSPSolve 0 0% 0% 377ms 77.41% KSPSolve_Private 1ms 0.21% 0.21% 376ms 77.21% KSPSolve_CG 0 0% 0.21% 216ms 44.35% KSP_PCApply.lto_priv.7 0 0% 0.21% 213ms 43.74% PCApply 0 0% 0.21% 212ms 43.53% PCApply_BJacobi_Singleblock 0 0% 0.21% 193ms 39.63% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 182ms 37.37% MatSolve 178ms 36.55% 36.76% 182ms 37.37% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.76% 182ms 37.37% PCApply_ICC 0 0% 36.76% 69ms 14.17% MatMult 0 0% 36.76% 69ms 14.17% MatMult_SeqAIJ 69ms 14.17% 50.92% 69ms 14.17% MatMult_SeqAIJ_Inode (inline) 61ms 12.53% 63.45% 61ms 12.53% ddot_ 0 0% 63.45% 40ms 8.21% VecTDot 0 0% 63.45% 40ms 8.21% VecTDot_Seq 1ms 0.21% 63.66% 40ms 8.21% VecXDot_Seq_Private.constprop.0 1ms 0.21% 63.86% 39ms 8.01% AbstractCardiacTissue::SolveCellSystems 0 0% 63.86% 39ms 8.01% CxxTest::RealWorldDescription::setUp 0 0% 63.86% 39ms 8.01% PetscInitialize 0 0% 63.86% 39ms 8.01% PetscSetup::setUpWorld 0 0% 63.86% 39ms 8.01% PetscSetupUtils::CommonSetup 0 0% 63.86% 39ms 8.01% PetscSetupUtils::InitialisePetsc 0 0% 63.86% 38ms 7.80% PMPI_Init_thread 0 0% 63.86% 38ms 7.80% ompi_mpi_init 1ms 0.21% 64.07% 31ms 6.37% 0 0% 64.07% 25ms 5.13% AbstractCardiacCell::ComputeExceptVoltage 0 0% 64.07% 25ms 5.13% orte_init 1ms 0.21% 64.27% 24ms 4.93% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 64.27% 23ms 4.72% VecNorm 1ms 0.21% 64.48% 23ms 4.72% VecNorm_Seq 0 0% 64.48% 20ms 4.11% MatNullSpaceRemove 2ms 0.41% 64.89% 19ms 3.90% EulerIvpOdeSolver::CalculateNextYValue 2ms 0.41% 65.30% 16ms 3.29% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 65.30% 16ms 3.29% VecAYPX 16ms 3.29% 68.58% 16ms 3.29% VecAYPX_Seq 11ms 2.26% 70.84% 16ms 3.29% __GI___exp 0 0% 70.84% 15ms 3.08% KSP_PCApply (partial-inline) 0 0% 70.84% 15ms 3.08% __GI__dl_catch_exception 0 0% 70.84% 15ms 3.08% _dl_catch_error 0 0% 70.84% 15ms 3.08% _dlerror_run 0 0% 70.84% 14ms 2.87% VecMDot 14ms 2.87% 73.72% 14ms 2.87% VecMDot_Seq 0 0% 73.72% 14ms 2.87% VecMXDot_Private 0 0% 73.72% 14ms 2.87% hwloc_topology_load 0 0% 73.72% 14ms 2.87% opal_stackframe_output 0 0% 73.72% 13ms 2.67% ___dlopen 0 0% 73.72% 13ms 2.67% _dl_open 0 0% 73.72% 13ms 2.67% dlopen_doit 0 0% 73.72% 13ms 2.67% dlopen_implementation (inline) 0 0% 73.72% 13ms 2.67% hwloc_linux_get_tid_last_cpu_location 0 0% 73.72% 13ms 2.67% mca_base_framework_open 0 0% 73.72% 13ms 2.67% mca_base_framework_register 0 0% 73.72% 12ms 2.46% dl_open_worker 0 0% 73.72% 12ms 2.46% mca_base_component_find 0 0% 73.72% 12ms 2.46% mca_base_component_repository_open 0 0% 73.72% 12ms 2.46% mca_base_framework_components_register 0 0% 73.72% 10ms 2.05% _dl_init 0 0% 73.72% 10ms 2.05% call_init (inline) 0 0% 73.72% 10ms 2.05% dl_open_worker_begin 0 0% 73.72% 9ms 1.85% AbstractCardiacTissue::UpdateCaches (inline) 4ms 0.82% 74.54% 9ms 1.85% CellLuoRudy1991FromCellML::GetIIonic 8ms 1.64% 76.18% 8ms 1.64% __memcpy_avx_unaligned_erms 0 0% 76.18% 8ms 1.64% _dl_lookup_symbol_x 0 0% 76.18% 8ms 1.64% _dl_start_user 1ms 0.21% 76.39% 7ms 1.44% BidomainSolver::SetupLinearSystem 0 0% 76.39% 7ms 1.44% PetscMemcpy (inline) 0 0% 76.39% 7ms 1.44% _dl_map_object 1ms 0.21% 76.59% 7ms 1.44% _dl_runtime_resolve_xsavec 0 0% 76.59% 6ms 1.23% KSPConvergedDefault 0 0% 76.59% 6ms 1.23% VecDestroy 0 0% 76.59% 6ms 1.23% VecDuplicate 0 0% 76.59% 6ms 1.23% VecDuplicate_Seq 0 0% 76.59% 6ms 1.23% VecMAXPY 6ms 1.23% 77.82% 6ms 1.23% VecMAXPY_Seq 1ms 0.21% 78.03% 6ms 1.23% _dl_fixup 1ms 0.21% 78.23% 6ms 1.23% boost::serialization::singleton::get_instance 4ms 0.82% 79.06% 6ms 1.23% do_lookup_x 0 0% 79.06% 6ms 1.23% opal_hwloc_base_get_topology 0 0% 79.06% 6ms 1.23% orte_ess_base_proc_binding 0 0% 79.06% 5ms 1.03% VecAXPY 0 0% 79.06% 5ms 1.03% VecAXPY_Seq 0 0% 79.06% 5ms 1.03% VecCopy 0 0% 79.06% 5ms 1.03% VecCopy_Seq (partial-inline) 5ms 1.03% 80.08% 5ms 1.03% __GI___libc_read 4ms 0.82% 80.90% 5ms 1.03% __ieee754_exp_fma 1ms 0.21% 81.11% 5ms 1.03% _dl_map_object_from_fd 0 0% 81.11% 5ms 1.03% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 5ms 1.03% 82.14% 5ms 1.03% daxpy_ 0 0% 82.14% 5ms 1.03% mca_base_framework_components_open 0 0% 82.14% 5ms 1.03% mca_topo_base_dist_graph_neighbors_count 0 0% 82.14% 4ms 0.82% AbstractCardiacProblem::Initialise 0 0% 82.14% 4ms 0.82% CxxTest::RealWorldDescription::tearDown 0 0% 82.14% 4ms 0.82% PetscFinalize 0 0% 82.14% 4ms 0.82% PetscMemzero (inline) 0 0% 82.14% 4ms 0.82% PetscSetup::tearDownWorld 0 0% 82.14% 4ms 0.82% PetscSetupUtils::CommonFinalize 0 0% 82.14% 4ms 0.82% VecSetType 1ms 0.21% 82.34% 4ms 0.82% __GI___libc_free 0 0% 82.34% 4ms 0.82% __GI_exit 0 0% 82.34% 4ms 0.82% __cxa_finalize 4ms 0.82% 83.16% 4ms 0.82% __memset_avx2_unaligned_erms 4ms 0.82% 83.98% 4ms 0.82% __mmap64 0 0% 83.98% 4ms 0.82% __run_exit_handlers 0 0% 83.98% 4ms 0.82% _dl_call_fini 0 0% 83.98% 4ms 0.82% _dl_fini 0 0% 83.98% 4ms 0.82% _dl_map_segments (inline) 0 0% 83.98% 4ms 0.82% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 83.98% 4ms 0.82% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 83.98% 4ms 0.82% ompi_mpi_finalize 0 0% 83.98% 3ms 0.62% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.21% 84.19% 3ms 0.62% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 84.19% 3ms 0.62% PetscMallocA 1ms 0.21% 84.39% 3ms 0.62% PetscMallocAlign (partial-inline) 1ms 0.21% 84.60% 3ms 0.62% PetscObjectComposeFunction_Private 0 0% 84.60% 3ms 0.62% VecCreate_Seq 0 0% 84.60% 3ms 0.62% VecDestroy_MPI 2ms 0.41% 85.01% 3ms 0.62% [libopen-pal.so.40.30.3] 0 0% 85.01% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 85.01% 3ms 0.62% __ieee754_pow_fma 3ms 0.62% 85.63% 3ms 0.62% __libc_openat64 0 0% 85.63% 3ms 0.62% __pow 3ms 0.62% 86.24% 3ms 0.62% __strcmp_avx2 0 0% 86.24% 3ms 0.62% _dl_open_relocate_one_object (inline) 0 0% 86.24% 3ms 0.62% _dl_relocate_object 3ms 0.62% 86.86% 3ms 0.62% _int_free 3ms 0.62% 87.47% 3ms 0.62% _int_malloc 0 0% 87.47% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 87.47% 3ms 0.62% elf_dynamic_do_Rela (inline) 0 0% 87.47% 3ms 0.62% elf_machine_rela (inline) 0 0% 87.47% 3ms 0.62% resolve_map (inline) 0 0% 87.47% 3ms 0.62% std::pow (inline) 3ms 0.62% 88.09% 3ms 0.62% std::vector::operator[] (inline) 3ms 0.62% 88.71% 3ms 0.62% strcmp