File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 122566ms, 91.90% of 133367ms total Dropped 1182 nodes (cum <= 666.84ms) flat flat% sum% cum cum% 0 0% 0% 133348ms 100% __libc_start_call_main 0 0% 0% 133348ms 100% __libc_start_main_impl 0 0% 0% 133348ms 100% _start 0 0% 0% 133344ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 133344ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 133344ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 133344ms 100% main 0 0% 0% 133305ms 100% AbstractConvergenceTester::Converge 0 0% 0% 133305ms 100% CxxTest::RealTestDescription::run 0 0% 0% 133305ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 133305ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 133305ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 133305ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 7ms 0.0052% 0.0052% 132098ms 99.05% AbstractCardiacProblem::Solve 8ms 0.006% 0.011% 131237ms 98.40% AbstractDynamicLinearPdeSolver::Solve 7ms 0.0052% 0.016% 72311ms 54.22% LinearSystem::Solve 2ms 0.0015% 0.018% 71751ms 53.80% KSPSolve 10ms 0.0075% 0.025% 71750ms 53.80% KSPSolve_Private 14ms 0.01% 0.036% 71441ms 53.57% KSPSolve_SYMMLQ 605ms 0.45% 0.49% 49159ms 36.86% AbstractCardiacTissue::SolveCellSystems 9ms 0.0067% 0.5% 39894ms 29.91% PCApply 4ms 0.003% 0.5% 39869ms 29.89% PCApply_BJacobi_Singleblock 1137ms 0.85% 1.35% 38187ms 28.63% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0015% 1.35% 37387ms 28.03% KSPSolve_PREONLY (partial-inline) 3ms 0.0022% 1.36% 36325ms 27.24% PCApply_ICC 7ms 0.0052% 1.36% 36322ms 27.23% MatSolve 35914ms 26.93% 28.29% 36315ms 27.23% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.003% 28.29% 34249ms 25.68% KSP_PCApply.lto_priv.18 7760ms 5.82% 34.11% 33727ms 25.29% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 14ms 0.01% 34.12% 25528ms 19.14% MatMult 253ms 0.19% 34.31% 25514ms 19.13% MatMult_SeqAIJ (partial-inline) 24999ms 18.74% 53.06% 25511ms 19.13% MatMult_SeqAIJ_Inode (inline) 2245ms 1.68% 54.74% 16996ms 12.74% CardiacNewtonSolver::Solve 1481ms 1.11% 55.85% 10312ms 7.73% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 5640ms 4.23% 60.08% 10185ms 7.64% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 225ms 0.17% 60.25% 9188ms 6.89% AbstractCardiacTissue::UpdateCaches (inline) 1791ms 1.34% 61.59% 8567ms 6.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1151ms 0.86% 62.45% 8556ms 6.42% BidomainSolver::SetupLinearSystem 8528ms 6.39% 68.85% 8528ms 6.39% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1ms 0.00075% 68.85% 7457ms 5.59% KSP_PCApply (partial-inline) 8ms 0.006% 68.85% 7029ms 5.27% KSPConvergedDefault 4273ms 3.20% 72.06% 4369ms 3.28% __ieee754_log_fma 0 0% 72.06% 4100ms 3.07% boost::numeric::ublas::norm_inf (inline) 2860ms 2.14% 74.20% 4100ms 3.07% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.20% 4100ms 3.07% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.20% 4100ms 3.07% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3565ms 2.67% 76.88% 3565ms 2.67% ddot_ 38ms 0.028% 76.90% 3203ms 2.40% std::pow (inline) 3ms 0.0022% 76.91% 3176ms 2.38% MatNullSpaceRemove 423ms 0.32% 77.22% 3146ms 2.36% __pow 2022ms 1.52% 78.74% 3127ms 2.34% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 3039ms 2.28% 81.02% 3039ms 2.28% __memcpy_avx_unaligned_erms 0 0% 81.02% 2998ms 2.25% PetscMemcpy (inline) 4ms 0.003% 81.02% 2961ms 2.22% VecDot 2ms 0.0015% 81.02% 2957ms 2.22% VecDot_Seq 1ms 0.00075% 81.02% 2955ms 2.22% VecXDot_Seq_Private.constprop.0 369ms 0.28% 81.30% 2691ms 2.02% __ieee754_pow_fma 28ms 0.021% 81.32% 2644ms 1.98% VecCopy 3ms 0.0022% 81.32% 2614ms 1.96% VecCopy_Seq (partial-inline) 14ms 0.01% 81.33% 2536ms 1.90% VecAXPY 7ms 0.0052% 81.34% 2522ms 1.89% VecAXPY_Seq 2506ms 1.88% 83.22% 2506ms 1.88% daxpy_ 3ms 0.0022% 83.22% 2052ms 1.54% VecMDot 8ms 0.006% 83.23% 2049ms 1.54% VecMXDot_Private 2028ms 1.52% 84.75% 2040ms 1.53% VecMDot_Seq 1ms 0.00075% 84.75% 2036ms 1.53% AbstractFeVolumeIntegralAssembler::DoAssemble 24ms 0.018% 84.77% 1692ms 1.27% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1548ms 1.16% 85.93% 1604ms 1.20% exp_inline (inline) 0 0% 85.93% 1391ms 1.04% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.93% 1228ms 0.92% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.93% 1228ms 0.92% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.93% 1228ms 0.92% boost_numeric_ublas_abs (inline) 1228ms 0.92% 86.85% 1228ms 0.92% std::abs (inline) 5ms 0.0037% 86.85% 1148ms 0.86% boost::numeric::ublas::matrix_assign (inline) 256ms 0.19% 87.04% 1135ms 0.85% boost::numeric::ublas::indexing_matrix_assign 9ms 0.0067% 87.05% 1121ms 0.84% VecMAXPY 1108ms 0.83% 87.88% 1112ms 0.83% VecMAXPY_Seq 708ms 0.53% 88.41% 1064ms 0.8% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.41% 1021ms 0.77% CuboidMeshConstructor::Construct 0 0% 88.41% 1020ms 0.76% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00075% 88.41% 1020ms 0.76% DistributedTetrahedralMesh::ConstructCuboid 996ms 0.75% 89.16% 996ms 0.75% [libchaste_heart.so] 4ms 0.003% 89.16% 921ms 0.69% VecNorm 2ms 0.0015% 89.16% 920ms 0.69% Element::Element 911ms 0.68% 89.85% 911ms 0.68% __memset_avx2_unaligned_erms 2ms 0.0015% 89.85% 907ms 0.68% VecNorm_Seq 6ms 0.0045% 89.85% 901ms 0.68% BidomainAssembler::ComputeMatrixTerm 3ms 0.0022% 89.86% 898ms 0.67% AbstractTetrahedralElement::CalculateJacobian 0 0% 89.86% 891ms 0.67% PetscMemzero (inline) 12ms 0.009% 89.86% 886ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 3ms 0.0022% 89.87% 854ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 0 0% 89.87% 841ms 0.63% AbstractBidomainSolver::FinaliseLinearSystem 258ms 0.19% 90.06% 840ms 0.63% AbstractBidomainSolver::CheckCompatibilityCondition 7ms 0.0052% 90.07% 835ms 0.63% VecScale 1ms 0.00075% 90.07% 828ms 0.62% VecScale_Seq 824ms 0.62% 90.68% 824ms 0.62% dscal_ 2ms 0.0015% 90.69% 772ms 0.58% BidomainProblem::WriteOneStep 2ms 0.0015% 90.69% 757ms 0.57% VecDuplicate 754ms 0.57% 91.25% 754ms 0.57% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 193ms 0.14% 91.40% 733ms 0.55% AbstractCardiacCell::SetVoltage 673ms 0.5% 91.90% 673ms 0.5% log_inline (inline)