File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12769ms, 86.36% of 14786ms total Dropped 721 nodes (cum <= 73.93ms) flat flat% sum% cum cum% 0 0% 0% 14780ms 100% __libc_start_call_main 0 0% 0% 14780ms 100% __libc_start_main_impl 0 0% 0% 14780ms 100% _start 0 0% 0% 14777ms 99.94% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14777ms 99.94% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14777ms 99.94% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14777ms 99.94% main 0 0% 0% 14742ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14742ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14742ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0068% 0.0068% 14721ms 99.56% AbstractCardiacProblem::Solve 3ms 0.02% 0.027% 11493ms 77.73% AbstractDynamicLinearPdeSolver::Solve 45ms 0.3% 0.33% 9175ms 62.05% AbstractCardiacTissue::SolveCellSystems 143ms 0.97% 1.30% 5678ms 38.40% AbstractCardiacCell::ComputeExceptVoltage 156ms 1.06% 2.35% 4879ms 33.00% AbstractOneStepIvpOdeSolver::InternalSolve 180ms 1.22% 3.57% 4153ms 28.09% EulerIvpOdeSolver::CalculateNextYValue 914ms 6.18% 9.75% 3926ms 26.55% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1698ms 11.48% 21.24% 3569ms 24.14% __GI___exp 1ms 0.0068% 21.24% 3162ms 21.39% MonodomainProblem::WriteOneStep 1ms 0.0068% 21.25% 3025ms 20.46% Hdf5DataWriter::PutVector 1ms 0.0068% 21.26% 3000ms 20.29% H5Dwrite 4ms 0.027% 21.28% 2980ms 20.15% H5D__write 96ms 0.65% 21.93% 2672ms 18.07% AbstractCardiacTissue::UpdateCaches (inline) 880ms 5.95% 27.88% 2528ms 17.10% CellLuoRudy1991FromCellML::GetIIonic 1649ms 11.15% 39.04% 1796ms 12.15% __ieee754_exp_fma 17ms 0.11% 39.15% 1773ms 11.99% H5F_set_coll_metadata_reads 0 0% 39.15% 1772ms 11.98% H5D__chunk_collective_write 19ms 0.13% 39.28% 1591ms 10.76% H5FD_s3comms_uriencode 0 0% 39.28% 1535ms 10.38% LinearSystem::Solve 1ms 0.0068% 39.29% 1388ms 9.39% KSPSolve 4ms 0.027% 39.31% 1387ms 9.38% KSPSolve_Private 4ms 0.027% 39.34% 1371ms 9.27% KSPSolve_CG 1ms 0.0068% 39.35% 1245ms 8.42% H5F_block_write 1ms 0.0068% 39.35% 1244ms 8.41% H5PB_write 1ms 0.0068% 39.36% 1243ms 8.41% H5F__accum_write 2ms 0.014% 39.38% 1242ms 8.40% H5FD_write 42ms 0.28% 39.66% 1234ms 8.35% 2ms 0.014% 39.67% 1158ms 7.83% H5D__mpio_select_write 4ms 0.027% 39.70% 1108ms 7.49% H5D__chunk_cacheable 0 0% 39.70% 1056ms 7.14% PMPI_File_write_at_all 1030ms 6.97% 46.67% 1033ms 6.99% __GI_pwritev64 371ms 2.51% 49.17% 977ms 6.61% H5S_select_iterate 4ms 0.027% 49.20% 868ms 5.87% std::pow (inline) 81ms 0.55% 49.75% 864ms 5.84% __pow 83ms 0.56% 50.31% 781ms 5.28% __ieee754_pow_fma 344ms 2.33% 52.64% 756ms 5.11% MonodomainSolver::SetupLinearSystem 3ms 0.02% 52.66% 703ms 4.75% PCApply 2ms 0.014% 52.67% 696ms 4.71% PCApply_BJacobi_Singleblock 0 0% 52.67% 668ms 4.52% KSPSolve_PREONLY 2ms 0.014% 52.68% 666ms 4.50% PCApply_ICC 1ms 0.0068% 52.69% 664ms 4.49% MatSolve 653ms 4.42% 57.11% 663ms 4.48% MatSolve_SeqSBAIJ_1_NaturalOrdering 296ms 2.00% 59.11% 649ms 4.39% CellLuoRudy1991FromCellML::VerifyStateVariables 3ms 0.02% 59.13% 642ms 4.34% MatMult 637ms 4.31% 63.44% 639ms 4.32% MatMult_SeqAIJ 75ms 0.51% 63.95% 618ms 4.18% H5D__chunk_set_sizes 2ms 0.014% 63.96% 534ms 3.61% KSP_PCApply.lto_priv.7 43ms 0.29% 64.25% 416ms 2.81% H5S_mpio_space_type 409ms 2.77% 67.02% 409ms 2.77% log_inline (inline) 248ms 1.68% 68.69% 249ms 1.68% exp_inline (inline) 115ms 0.78% 69.47% 239ms 1.62% TimeStepper::TimeStepper 4ms 0.027% 69.50% 232ms 1.57% KSPConvergedDefault 15ms 0.1% 69.60% 200ms 1.35% H5VM_chunk_index 48ms 0.32% 69.92% 192ms 1.30% __GI___libc_malloc 191ms 1.29% 71.22% 191ms 1.29% std::isinf (inline) 187ms 1.26% 72.48% 187ms 1.26% [libchaste_heart.so] 106ms 0.72% 73.20% 187ms 1.26% top12 (inline) 94ms 0.64% 73.83% 185ms 1.25% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 141ms 0.95% 74.79% 182ms 1.23% _int_malloc 0 0% 74.79% 172ms 1.16% KSP_PCApply 132ms 0.89% 75.68% 168ms 1.14% AbstractOneStepIvpOdeSolver::Solve 135ms 0.91% 76.59% 160ms 1.08% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 36ms 0.24% 76.84% 159ms 1.08% __GI___libc_free 146ms 0.99% 77.82% 146ms 0.99% ddot_ 30ms 0.2% 78.03% 140ms 0.95% AbstractCardiacCell::SetVoltage (partial-inline) 0 0% 78.03% 136ms 0.92% Hdf5DataWriter::PutUnlimitedVariable 8ms 0.054% 78.08% 134ms 0.91% MPI_Type_free 12ms 0.081% 78.16% 133ms 0.9% H5S_set_version 9ms 0.061% 78.22% 133ms 0.9% ompi_datatype_create 11ms 0.074% 78.30% 131ms 0.89% ompi_datatype_destroy 129ms 0.87% 79.17% 129ms 0.87% TimeStepper::CalculateNextTime 48ms 0.32% 79.49% 122ms 0.83% _int_free 43ms 0.29% 79.78% 121ms 0.82% H5VM_array_calc 3ms 0.02% 79.81% 115ms 0.78% PMPI_File_set_view 0 0% 79.81% 110ms 0.74% VecDuplicate 5ms 0.034% 79.84% 110ms 0.74% VecDuplicate_MPI 2ms 0.014% 79.85% 109ms 0.74% VecNorm 5ms 0.034% 79.89% 108ms 0.73% ompi_info_register_framework_params 18ms 0.12% 80.01% 107ms 0.72% ompi_datatype_release_args 48ms 0.32% 80.33% 106ms 0.72% std::__cxx11::basic_string::basic_string 0 0% 80.33% 102ms 0.69% VecNorm_Seq 58ms 0.39% 80.73% 101ms 0.68% H5S_hyper_add_span_element 99ms 0.67% 81.39% 99ms 0.67% H5VM_chunk_index_scaled 74ms 0.5% 81.90% 95ms 0.64% AbstractParameterisedSystem::GetAnyVariable 94ms 0.64% 82.53% 94ms 0.64% __memcpy_avx_unaligned_erms 85ms 0.57% 83.11% 92ms 0.62% AbstractParameterisedSystem::SetAnyVariable 90ms 0.61% 83.71% 90ms 0.61% __ieee754_log_fma 3ms 0.02% 83.73% 89ms 0.6% VecTDot 26ms 0.18% 83.91% 89ms 0.6% std::vector::_M_assign_aux (inline) 0 0% 83.91% 89ms 0.6% std::vector::assign (inline) 87ms 0.59% 84.50% 87ms 0.59% H5VM_array_offset_pre 1ms 0.0068% 84.51% 86ms 0.58% PMPI_Type_create_resized 0 0% 84.51% 84ms 0.57% VecTDot_Seq 1ms 0.0068% 84.51% 84ms 0.57% VecXDot_Seq_Private.constprop.0 82ms 0.55% 85.07% 82ms 0.55% asuint64 (inline) 41ms 0.28% 85.34% 80ms 0.54% AbstractCardiacCell::GetVoltage (partial-inline) 5ms 0.034% 85.38% 80ms 0.54% MPI_Type_contiguous 47ms 0.32% 85.70% 78ms 0.53% TimeStepper::AdvanceOneTimeStep 19ms 0.13% 85.82% 78ms 0.53% ompi_datatype_set_args 77ms 0.52% 86.35% 77ms 0.52% [libm.so.6] 2ms 0.014% 86.36% 77ms 0.52% ompi_datatype_duplicate