File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 394ms, 88.74% of 444ms total Dropped 167 nodes (cum <= 2.22ms) flat flat% sum% cum cum% 0 0% 0% 437ms 98.42% __libc_start_call_main 0 0% 0% 437ms 98.42% __libc_start_main_impl 0 0% 0% 437ms 98.42% _start 0 0% 0% 434ms 97.75% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 434ms 97.75% CxxTest::TestRunner::runAllTests 0 0% 0% 434ms 97.75% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 434ms 97.75% main 0 0% 0% 401ms 90.32% CxxTest::RealTestDescription::run 0 0% 0% 401ms 90.32% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 401ms 90.32% CxxTest::TestRunner::runTest (inline) 0 0% 0% 401ms 90.32% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 401ms 90.32% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 396ms 89.19% AbstractCardiacProblem::Solve 0 0% 0% 395ms 88.96% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 357ms 80.41% KSPSolve 1ms 0.23% 0.23% 357ms 80.41% KSPSolve_Private 0 0% 0.23% 357ms 80.41% LinearSystem::Solve 0 0% 0.23% 356ms 80.18% KSPSolve_CG 0 0% 0.23% 215ms 48.42% KSP_PCApply.lto_priv.7 0 0% 0.23% 210ms 47.30% PCApply 0 0% 0.23% 209ms 47.07% PCApply_BJacobi_Singleblock 0 0% 0.23% 183ms 41.22% KSPSolve_PREONLY (partial-inline) 0 0% 0.23% 176ms 39.64% MatSolve 173ms 38.96% 39.19% 176ms 39.64% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 39.19% 176ms 39.64% PCApply_ICC 0 0% 39.19% 86ms 19.37% MatMult 4ms 0.9% 40.09% 86ms 19.37% MatMult_SeqAIJ (partial-inline) 82ms 18.47% 58.56% 86ms 19.37% MatMult_SeqAIJ_Inode (inline) 0 0% 58.56% 31ms 6.98% AbstractCardiacTissue::SolveCellSystems 31ms 6.98% 65.54% 31ms 6.98% ddot_ 0 0% 65.54% 30ms 6.76% CxxTest::RealWorldDescription::setUp 0 0% 65.54% 30ms 6.76% PMPI_Init_thread 0 0% 65.54% 30ms 6.76% PetscInitialize 0 0% 65.54% 30ms 6.76% PetscSetup::setUpWorld 0 0% 65.54% 30ms 6.76% PetscSetupUtils::CommonSetup 0 0% 65.54% 30ms 6.76% PetscSetupUtils::InitialisePetsc 0 0% 65.54% 30ms 6.76% ompi_mpi_init 0 0% 65.54% 29ms 6.53% VecTDot 0 0% 65.54% 29ms 6.53% VecTDot_Seq 0 0% 65.54% 29ms 6.53% VecXDot_Seq_Private.constprop.0 0 0% 65.54% 26ms 5.86% 2ms 0.45% 65.99% 20ms 4.50% AbstractCardiacCell::ComputeExceptVoltage 0 0% 65.99% 20ms 4.50% MatNullSpaceRemove 0 0% 65.99% 20ms 4.50% orte_init 0 0% 65.99% 16ms 3.60% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 65.99% 16ms 3.60% __GI__dl_catch_exception 0 0% 65.99% 16ms 3.60% _dl_catch_error 0 0% 65.99% 16ms 3.60% _dlerror_run 3ms 0.68% 66.67% 14ms 3.15% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 66.67% 14ms 3.15% EulerIvpOdeSolver::CalculateNextYValue 0 0% 66.67% 14ms 3.15% opal_stackframe_output 0 0% 66.67% 13ms 2.93% VecMDot 13ms 2.93% 69.59% 13ms 2.93% VecMDot_Seq 0 0% 69.59% 13ms 2.93% VecMXDot_Private 9ms 2.03% 71.62% 12ms 2.70% __GI___exp 0 0% 71.62% 12ms 2.70% hwloc_topology_load 0 0% 71.62% 12ms 2.70% mca_base_framework_open 1ms 0.23% 71.85% 11ms 2.48% VecAXPY 0 0% 71.85% 11ms 2.48% ___dlopen 0 0% 71.85% 11ms 2.48% _dl_open 0 0% 71.85% 11ms 2.48% dl_open_worker 0 0% 71.85% 11ms 2.48% dlopen_doit 0 0% 71.85% 11ms 2.48% dlopen_implementation (inline) 0 0% 71.85% 11ms 2.48% hwloc_linux_get_tid_last_cpu_location 1ms 0.23% 72.07% 10ms 2.25% VecAXPY_Seq 0 0% 72.07% 10ms 2.25% VecAYPX 9ms 2.03% 74.10% 10ms 2.25% VecAYPX_Seq 0 0% 74.10% 10ms 2.25% dl_open_worker_begin 0 0% 74.10% 10ms 2.25% mca_base_framework_components_register 0 0% 74.10% 10ms 2.25% mca_base_framework_register 0 0% 74.10% 9ms 2.03% mca_base_component_find 0 0% 74.10% 9ms 2.03% mca_base_component_repository_open 0 0% 74.10% 8ms 1.80% _dl_init 0 0% 74.10% 8ms 1.80% call_init (inline) 8ms 1.80% 75.90% 8ms 1.80% daxpy_ 0 0% 75.90% 7ms 1.58% KSP_PCApply (partial-inline) 0 0% 75.90% 7ms 1.58% VecMAXPY 7ms 1.58% 77.48% 7ms 1.58% VecMAXPY_Seq 7ms 1.58% 79.05% 7ms 1.58% __memcpy_avx_unaligned_erms 0 0% 79.05% 7ms 1.58% _dl_start_user 2ms 0.45% 79.50% 6ms 1.35% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 79.50% 6ms 1.35% PetscMemcpy (inline) 0 0% 79.50% 6ms 1.35% PetscMemzero (inline) 0 0% 79.50% 6ms 1.35% VecDuplicate 0 0% 79.50% 6ms 1.35% VecDuplicate_Seq 6ms 1.35% 80.86% 6ms 1.35% __memset_avx2_unaligned_erms 0 0% 80.86% 6ms 1.35% _dl_map_object 0 0% 80.86% 5ms 1.13% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.23% 81.08% 5ms 1.13% BidomainSolver::SetupLinearSystem 1ms 0.23% 81.31% 5ms 1.13% CellLuoRudy1991FromCellML::GetIIonic 0 0% 81.31% 5ms 1.13% PetscMallocA 1ms 0.23% 81.53% 5ms 1.13% PetscMallocAlign (partial-inline) 5ms 1.13% 82.66% 5ms 1.13% __GI___libc_read 0 0% 82.66% 5ms 1.13% __dlclose 0 0% 82.66% 5ms 1.13% _dl_close 1ms 0.23% 82.88% 5ms 1.13% _dl_close_worker (inline) 0 0% 82.88% 5ms 1.13% _dl_lookup_symbol_x 1ms 0.23% 83.11% 5ms 1.13% _dl_runtime_resolve_xsavec 0 0% 83.11% 5ms 1.13% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 83.11% 5ms 1.13% boost::serialization::singleton::get_instance 4ms 0.9% 84.01% 5ms 1.13% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 84.01% 5ms 1.13% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 84.01% 5ms 1.13% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 84.01% 5ms 1.13% mca_base_component_repository_release 0 0% 84.01% 4ms 0.9% AbstractCardiacProblem::Initialise 1ms 0.23% 84.23% 4ms 0.9% VecSet 1ms 0.23% 84.46% 4ms 0.9% __cxa_finalize 0 0% 84.46% 4ms 0.9% _dl_call_fini 2ms 0.45% 84.91% 4ms 0.9% _dl_fixup 0 0% 84.91% 4ms 0.9% _dl_map_object_deps 0 0% 84.91% 4ms 0.9% _dl_map_object_from_fd 0 0% 84.91% 4ms 0.9% _dl_open_relocate_one_object (inline) 0 0% 84.91% 4ms 0.9% _dl_relocate_object 3ms 0.68% 85.59% 4ms 0.9% do_lookup_x 1ms 0.23% 85.81% 4ms 0.9% elf_dynamic_do_Rela (inline) 0 0% 85.81% 4ms 0.9% mca_base_components_close 0 0% 85.81% 4ms 0.9% mca_base_framework_components_open 0 0% 85.81% 4ms 0.9% opal_hwloc_base_get_topology 0 0% 85.81% 4ms 0.9% openaux 0 0% 85.81% 4ms 0.9% orte_ess_base_proc_binding 0 0% 85.81% 3ms 0.68% CxxTest::RealWorldDescription::tearDown 0 0% 85.81% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.23% 86.04% 3ms 0.68% KSPConvergedDefault 0 0% 86.04% 3ms 0.68% PCSetUp 0 0% 86.04% 3ms 0.68% PetscFinalize 0 0% 86.04% 3ms 0.68% PetscSetup::tearDownWorld 0 0% 86.04% 3ms 0.68% PetscSetupUtils::CommonFinalize 0 0% 86.04% 3ms 0.68% VecCopy 0 0% 86.04% 3ms 0.68% VecCopy_Seq (partial-inline) 1ms 0.23% 86.26% 3ms 0.68% VecCreate 1ms 0.23% 86.49% 3ms 0.68% VecDestroy 0 0% 86.49% 3ms 0.68% VecNorm 0 0% 86.49% 3ms 0.68% VecSet_Seq (partial-inline) 0 0% 86.49% 3ms 0.68% __GI__IO_getline_info 0 0% 86.49% 3ms 0.68% __GI_exit 3ms 0.68% 87.16% 3ms 0.68% __GI_munmap 3ms 0.68% 87.84% 3ms 0.68% __ieee754_exp_fma 0 0% 87.84% 3ms 0.68% __run_exit_handlers 0 0% 87.84% 3ms 0.68% _dl_fini 0 0% 87.84% 3ms 0.68% _dl_unmap 0 0% 87.84% 3ms 0.68% _dl_unmap_segments (inline) 1ms 0.23% 88.06% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 88.06% 3ms 0.68% elf_machine_rela (inline) 0 0% 88.06% 3ms 0.68% mca_topo_base_dist_graph_neighbors_count 0 0% 88.06% 3ms 0.68% ompi_mpi_finalize 0 0% 88.06% 3ms 0.68% resolve_map (inline) 3ms 0.68% 88.74% 3ms 0.68% strcmp