File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 108808ms, 91.79% of 118542ms total Dropped 1114 nodes (cum <= 592.71ms) flat flat% sum% cum cum% 0 0% 0% 118532ms 100% __libc_start_call_main 0 0% 0% 118532ms 100% __libc_start_main_impl 0 0% 0% 118532ms 100% _start 0 0% 0% 118529ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 118529ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 118529ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 118529ms 100% main 0 0% 0% 118493ms 100% AbstractConvergenceTester::Converge 0 0% 0% 118493ms 100% CxxTest::RealTestDescription::run 0 0% 0% 118493ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 118493ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 118493ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 118493ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 7ms 0.0059% 0.0059% 117239ms 98.90% AbstractCardiacProblem::Solve 11ms 0.0093% 0.015% 116454ms 98.24% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0025% 0.018% 65020ms 54.85% LinearSystem::Solve 1ms 0.00084% 0.019% 64558ms 54.46% KSPSolve 8ms 0.0067% 0.025% 64557ms 54.46% KSPSolve_Private 17ms 0.014% 0.04% 64186ms 54.15% KSPSolve_SYMMLQ 228ms 0.19% 0.23% 42595ms 35.93% AbstractCardiacTissue::SolveCellSystems 4ms 0.0034% 0.24% 36470ms 30.77% PCApply 5ms 0.0042% 0.24% 36456ms 30.75% PCApply_BJacobi_Singleblock 0 0% 0.24% 34005ms 28.69% KSPSolve_PREONLY (partial-inline) 2ms 0.0017% 0.24% 32909ms 27.76% PCApply_ICC 7ms 0.0059% 0.25% 32907ms 27.76% MatSolve 32443ms 27.37% 27.62% 32900ms 27.75% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1688ms 1.42% 29.04% 32689ms 27.58% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 29.04% 31462ms 26.54% KSP_PCApply.lto_priv.18 6694ms 5.65% 34.69% 27897ms 23.53% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 7ms 0.0059% 34.69% 21870ms 18.45% MatMult 334ms 0.28% 34.97% 21863ms 18.44% MatMult_SeqAIJ (partial-inline) 21320ms 17.99% 52.96% 21862ms 18.44% MatMult_SeqAIJ_Inode (inline) 2031ms 1.71% 54.67% 14714ms 12.41% CardiacNewtonSolver::Solve 328ms 0.28% 54.95% 9045ms 7.63% AbstractCardiacTissue::UpdateCaches (inline) 4380ms 3.69% 58.64% 8558ms 7.22% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1921ms 1.62% 60.26% 8473ms 7.15% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1105ms 0.93% 61.20% 7785ms 6.57% BidomainSolver::SetupLinearSystem 1099ms 0.93% 62.12% 7123ms 6.01% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00084% 62.12% 7016ms 5.92% KSP_PCApply (partial-inline) 7ms 0.0059% 62.13% 6450ms 5.44% KSPConvergedDefault 5744ms 4.85% 66.98% 5744ms 4.85% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3849ms 3.25% 70.22% 3891ms 3.28% __ieee754_log_fma 0 0% 70.22% 3726ms 3.14% boost::numeric::ublas::norm_inf (inline) 2525ms 2.13% 72.35% 3726ms 3.14% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.35% 3726ms 3.14% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.35% 3726ms 3.14% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 5ms 0.0042% 72.36% 3254ms 2.75% MatNullSpaceRemove 22ms 0.019% 72.38% 3168ms 2.67% std::pow (inline) 384ms 0.32% 72.70% 3140ms 2.65% __pow 3122ms 2.63% 75.33% 3122ms 2.63% __memcpy_avx_unaligned_erms 0 0% 75.33% 3077ms 2.60% PetscMemcpy (inline) 1770ms 1.49% 76.83% 2953ms 2.49% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2758ms 2.33% 79.15% 2758ms 2.33% ddot_ 356ms 0.3% 79.45% 2741ms 2.31% __ieee754_pow_fma 31ms 0.026% 79.48% 2655ms 2.24% VecCopy 5ms 0.0042% 79.48% 2622ms 2.21% VecCopy_Seq (partial-inline) 11ms 0.0093% 79.49% 2375ms 2.00% VecAXPY 9ms 0.0076% 79.50% 2364ms 1.99% VecAXPY_Seq 2341ms 1.97% 81.48% 2341ms 1.97% daxpy_ 5ms 0.0042% 81.48% 2220ms 1.87% VecDot 1ms 0.00084% 81.48% 2215ms 1.87% VecDot_Seq 1ms 0.00084% 81.48% 2214ms 1.87% VecXDot_Seq_Private.constprop.0 5ms 0.0042% 81.49% 2080ms 1.75% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.0017% 81.49% 1868ms 1.58% VecMDot 10ms 0.0084% 81.50% 1866ms 1.57% VecMXDot_Private 1849ms 1.56% 83.06% 1854ms 1.56% VecMDot_Seq 29ms 0.024% 83.08% 1725ms 1.46% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1565ms 1.32% 84.40% 1632ms 1.38% exp_inline (inline) 0 0% 84.40% 1427ms 1.20% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1414ms 1.19% 85.59% 1414ms 1.19% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 8ms 0.0067% 85.60% 1381ms 1.16% VecMAXPY 1363ms 1.15% 86.75% 1373ms 1.16% VecMAXPY_Seq 3ms 0.0025% 86.75% 1134ms 0.96% boost::numeric::ublas::matrix_assign (inline) 217ms 0.18% 86.94% 1123ms 0.95% boost::numeric::ublas::indexing_matrix_assign 0 0% 86.94% 1107ms 0.93% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.94% 1107ms 0.93% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.94% 1107ms 0.93% boost_numeric_ublas_abs (inline) 1107ms 0.93% 87.87% 1107ms 0.93% std::abs (inline) 0 0% 87.87% 1103ms 0.93% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 87.87% 1103ms 0.93% CuboidMeshConstructor::Construct 2ms 0.0017% 87.87% 1103ms 0.93% DistributedTetrahedralMesh::ConstructCuboid 1086ms 0.92% 88.79% 1086ms 0.92% __memset_avx2_unaligned_erms 0 0% 88.79% 1077ms 0.91% PetscMemzero (inline) 782ms 0.66% 89.45% 1044ms 0.88% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 3ms 0.0025% 89.45% 1011ms 0.85% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0017% 89.45% 999ms 0.84% Element::Element 0 0% 89.45% 956ms 0.81% AbstractTetrahedralElement::AbstractTetrahedralElement 923ms 0.78% 90.23% 923ms 0.78% [libchaste_heart.so] 5ms 0.0042% 90.23% 897ms 0.76% BidomainAssembler::ComputeMatrixTerm 1ms 0.00084% 90.23% 873ms 0.74% VecDuplicate 3ms 0.0025% 90.24% 865ms 0.73% VecScale 6ms 0.0051% 90.24% 865ms 0.73% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0042% 90.25% 862ms 0.73% VecScale_Seq 856ms 0.72% 90.97% 856ms 0.72% dscal_ 2ms 0.0017% 90.97% 811ms 0.68% VecNorm 1ms 0.00084% 90.97% 803ms 0.68% VecNorm_Seq 2ms 0.0017% 90.97% 755ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 218ms 0.18% 91.16% 753ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 17ms 0.014% 91.17% 749ms 0.63% PetscMallocA 11ms 0.0093% 91.18% 732ms 0.62% PetscMallocAlign (partial-inline) 0 0% 91.18% 722ms 0.61% BidomainProblem::WriteOneStep 721ms 0.61% 91.79% 721ms 0.61% log_inline (inline) 0 0% 91.79% 653ms 0.55% AbstractFeAssemblerInterface::Assemble (inline)