File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 93585ms, 91.85% of 101889ms total Dropped 1095 nodes (cum <= 509.44ms) flat flat% sum% cum cum% 0 0% 0% 101873ms 100% __libc_start_call_main 0 0% 0% 101873ms 100% __libc_start_main_impl 0 0% 0% 101873ms 100% _start 0 0% 0% 101871ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 101871ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 101871ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 101871ms 100% main 0 0% 0% 101829ms 99.94% CxxTest::RealTestDescription::run 0 0% 0% 101829ms 99.94% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 101829ms 99.94% CxxTest::TestRunner::runTest (inline) 0 0% 0% 101829ms 99.94% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 101829ms 99.94% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 101828ms 99.94% AbstractConvergenceTester::Converge 2ms 0.002% 0.002% 100885ms 99.01% AbstractCardiacProblem::Solve 6ms 0.0059% 0.0079% 100159ms 98.30% AbstractDynamicLinearPdeSolver::Solve 9ms 0.0088% 0.017% 56745ms 55.69% LinearSystem::Solve 2ms 0.002% 0.019% 56258ms 55.21% KSPSolve 7ms 0.0069% 0.026% 56256ms 55.21% KSPSolve_Private 15ms 0.015% 0.04% 55916ms 54.88% KSPSolve_SYMMLQ 324ms 0.32% 0.36% 35900ms 35.23% AbstractCardiacTissue::SolveCellSystems 3ms 0.0029% 0.36% 30836ms 30.26% PCApply 1ms 0.00098% 0.36% 30820ms 30.25% PCApply_BJacobi_Singleblock 4ms 0.0039% 0.37% 29199ms 28.66% KSPSolve_PREONLY (partial-inline) 1ms 0.00098% 0.37% 28365ms 27.84% PCApply_ICC 2ms 0.002% 0.37% 28364ms 27.84% MatSolve 28024ms 27.50% 27.87% 28362ms 27.84% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 748ms 0.73% 28.61% 27934ms 27.42% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 0 0% 28.61% 26538ms 26.05% KSP_PCApply.lto_priv.18 5955ms 5.84% 34.45% 24553ms 24.10% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 9ms 0.0088% 34.46% 20253ms 19.88% MatMult 223ms 0.22% 34.68% 20244ms 19.87% MatMult_SeqAIJ (partial-inline) 19863ms 19.49% 54.17% 20242ms 19.87% MatMult_SeqAIJ_Inode (inline) 1778ms 1.75% 55.92% 12947ms 12.71% CardiacNewtonSolver::Solve 4178ms 4.10% 60.02% 7606ms 7.46% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 164ms 0.16% 60.18% 6958ms 6.83% AbstractCardiacTissue::UpdateCaches (inline) 911ms 0.89% 61.08% 6660ms 6.54% BidomainSolver::SetupLinearSystem 1049ms 1.03% 62.10% 6634ms 6.51% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1438ms 1.41% 63.52% 6518ms 6.40% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1ms 0.00098% 63.52% 5750ms 5.64% KSP_PCApply (partial-inline) 5358ms 5.26% 68.78% 5358ms 5.26% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 2ms 0.002% 68.78% 5344ms 5.24% KSPConvergedDefault 3215ms 3.16% 71.93% 3291ms 3.23% __ieee754_log_fma 0 0% 71.93% 3207ms 3.15% boost::numeric::ublas::norm_inf (inline) 2227ms 2.19% 74.12% 3207ms 3.15% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.12% 3207ms 3.15% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.12% 3207ms 3.15% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 2737ms 2.69% 76.81% 2737ms 2.69% ddot_ 2540ms 2.49% 79.30% 2540ms 2.49% __memcpy_avx512_unaligned_erms 0 0% 79.30% 2509ms 2.46% PetscMemcpy (inline) 1625ms 1.59% 80.89% 2484ms 2.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 5ms 0.0049% 80.90% 2445ms 2.40% MatNullSpaceRemove 25ms 0.025% 80.92% 2389ms 2.34% std::pow (inline) 284ms 0.28% 81.20% 2352ms 2.31% __pow 4ms 0.0039% 81.21% 2295ms 2.25% VecDot 1ms 0.00098% 81.21% 2291ms 2.25% VecDot_Seq 1ms 0.00098% 81.21% 2290ms 2.25% VecXDot_Seq_Private.constprop.0 22ms 0.022% 81.23% 2203ms 2.16% VecCopy 2ms 0.002% 81.23% 2179ms 2.14% VecCopy_Seq (partial-inline) 282ms 0.28% 81.51% 2043ms 2.01% __ieee754_pow_fma 18ms 0.018% 81.52% 1868ms 1.83% VecAXPY 3ms 0.0029% 81.53% 1850ms 1.82% VecAXPY_Seq 1840ms 1.81% 83.33% 1840ms 1.81% daxpy_ 0 0% 83.33% 1567ms 1.54% AbstractFeVolumeIntegralAssembler::DoAssemble 5ms 0.0049% 83.34% 1513ms 1.48% VecMDot 10ms 0.0098% 83.35% 1508ms 1.48% VecMXDot_Private 1492ms 1.46% 84.81% 1497ms 1.47% VecMDot_Seq 18ms 0.018% 84.83% 1318ms 1.29% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1166ms 1.14% 85.97% 1218ms 1.20% exp_inline (inline) 0 0% 85.97% 1081ms 1.06% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.97% 976ms 0.96% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.97% 976ms 0.96% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.97% 976ms 0.96% boost_numeric_ublas_abs (inline) 976ms 0.96% 86.93% 976ms 0.96% std::abs (inline) 7ms 0.0069% 86.94% 927ms 0.91% VecMAXPY 915ms 0.9% 87.84% 920ms 0.9% VecMAXPY_Seq 5ms 0.0049% 87.84% 873ms 0.86% boost::numeric::ublas::matrix_assign (inline) 193ms 0.19% 88.03% 866ms 0.85% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.03% 806ms 0.79% CuboidMeshConstructor::Construct 0 0% 88.03% 805ms 0.79% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.03% 805ms 0.79% DistributedTetrahedralMesh::ConstructCuboid 537ms 0.53% 88.56% 802ms 0.79% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 764ms 0.75% 89.31% 764ms 0.75% [libchaste_heart.so] 1ms 0.00098% 89.31% 718ms 0.7% Element::Element 6ms 0.0059% 89.32% 717ms 0.7% VecScale 5ms 0.0049% 89.32% 715ms 0.7% BidomainAssembler::ComputeMatrixTerm 1ms 0.00098% 89.32% 711ms 0.7% VecScale_Seq 1ms 0.00098% 89.32% 709ms 0.7% VecNorm 705ms 0.69% 90.01% 705ms 0.69% dscal_ 3ms 0.0029% 90.02% 702ms 0.69% VecNorm_Seq 1ms 0.00098% 90.02% 692ms 0.68% AbstractTetrahedralElement::CalculateJacobian 11ms 0.011% 90.03% 672ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00098% 90.03% 670ms 0.66% BidomainProblem::WriteOneStep 3ms 0.0029% 90.03% 662ms 0.65% AbstractTetrahedralElement::AbstractTetrahedralElement 619ms 0.61% 90.64% 619ms 0.61% __memset_avx512_unaligned_erms 0 0% 90.64% 610ms 0.6% PetscMemzero (inline) 2ms 0.002% 90.64% 573ms 0.56% VecDuplicate 551ms 0.54% 91.18% 551ms 0.54% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1ms 0.00098% 91.18% 547ms 0.54% AbstractBidomainSolver::FinaliseLinearSystem 158ms 0.16% 91.34% 545ms 0.53% AbstractBidomainSolver::CheckCompatibilityCondition 520ms 0.51% 91.85% 520ms 0.51% log_inline (inline)