File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 4077ms, 88.25% of 4620ms total Dropped 472 nodes (cum <= 23.10ms) flat flat% sum% cum cum% 0 0% 0% 4611ms 99.81% __libc_start_call_main 0 0% 0% 4611ms 99.81% __libc_start_main_impl 0 0% 0% 4611ms 99.81% _start 0 0% 0% 4608ms 99.74% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 4608ms 99.74% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 4608ms 99.74% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 4608ms 99.74% main 0 0% 0% 4573ms 98.98% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 4573ms 98.98% CxxTest::TestRunner::runTest (inline) 0 0% 0% 4573ms 98.98% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 0 0% 0% 4564ms 98.79% AbstractCardiacProblem::Solve 0 0% 0% 4554ms 98.57% AbstractDynamicLinearPdeSolver::Solve 16ms 0.35% 0.35% 2283ms 49.42% AbstractCardiacTissue::SolveCellSystems 0 0% 0.35% 1751ms 37.90% LinearSystem::Solve 0 0% 0.35% 1715ms 37.12% KSPSolve 2ms 0.043% 0.39% 1715ms 37.12% KSPSolve_Private 0 0% 0.39% 1681ms 36.39% KSPSolve_SYMMLQ 19ms 0.41% 0.8% 1317ms 28.51% AbstractCardiacCell::ComputeExceptVoltage 24ms 0.52% 1.32% 1198ms 25.93% AbstractOneStepIvpOdeSolver::InternalSolve 110ms 2.38% 3.70% 1009ms 21.84% EulerIvpOdeSolver::CalculateNextYValue 0 0% 3.70% 922ms 19.96% MatMult 4ms 0.087% 3.79% 919ms 19.89% MatMult_SeqAIJ 914ms 19.78% 23.57% 919ms 19.89% MatMult_SeqAIJ_Inode (inline) 2ms 0.043% 23.61% 918ms 19.87% PCApply 1ms 0.022% 23.64% 909ms 19.68% PCApply_BJacobi_Singleblock 317ms 6.86% 30.50% 887ms 19.20% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 30.50% 784ms 16.97% KSPSolve_PREONLY (partial-inline) 21ms 0.45% 30.95% 737ms 15.95% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.043% 31.00% 736ms 15.93% MatSolve 0 0% 31.00% 736ms 15.93% PCApply_ICC 728ms 15.76% 46.75% 729ms 15.78% MatSolve_SeqSBAIJ_1_NaturalOrdering 317ms 6.86% 53.61% 701ms 15.17% CellLuoRudy1991FromCellML::GetIIonic 0 0% 53.61% 696ms 15.06% KSP_PCApply.lto_priv.18 259ms 5.61% 59.22% 662ms 14.33% __GI___exp 49ms 1.06% 60.28% 483ms 10.45% BidomainSolver::SetupLinearSystem 358ms 7.75% 68.03% 360ms 7.79% __ieee754_exp_fma 0 0% 68.03% 287ms 6.21% KSP_PCApply (partial-inline) 0 0% 68.03% 286ms 6.19% KSPConvergedDefault 3ms 0.065% 68.10% 202ms 4.37% std::pow (inline) 10ms 0.22% 68.31% 195ms 4.22% __pow 7ms 0.15% 68.46% 184ms 3.98% __ieee754_pow_fma 108ms 2.34% 70.80% 162ms 3.51% CellLuoRudy1991FromCellML::VerifyStateVariables 129ms 2.79% 73.59% 129ms 2.79% [libchaste_heart.so] 1ms 0.022% 73.61% 121ms 2.62% MatNullSpaceRemove 83ms 1.80% 75.41% 88ms 1.90% exp_inline (inline) 86ms 1.86% 77.27% 86ms 1.86% log_inline (inline) 1ms 0.022% 77.29% 81ms 1.75% VecDuplicate 22ms 0.48% 77.77% 75ms 1.62% MPI_Wtime 30ms 0.65% 78.42% 74ms 1.60% TimeStepper::TimeStepper 0 0% 78.42% 69ms 1.49% VecMDot 3ms 0.065% 78.48% 69ms 1.49% VecMXDot_Private 64ms 1.39% 79.87% 64ms 1.39% TimeStepper::CalculateNextTime 7ms 0.15% 80.02% 55ms 1.19% PetscLogEventEndDefault 2ms 0.043% 80.06% 53ms 1.15% __GI___clock_gettime 4ms 0.087% 80.15% 51ms 1.10% VecMAXPY 51ms 1.10% 81.26% 51ms 1.10% [[vdso]] 50ms 1.08% 82.34% 50ms 1.08% [libm.so.6] 6ms 0.13% 82.47% 47ms 1.02% PetscLogEventBeginDefault 46ms 1% 83.46% 47ms 1.02% VecMDot_Seq 44ms 0.95% 84.42% 44ms 0.95% ddot_ 0 0% 84.42% 42ms 0.91% VecDuplicate_MPI 13ms 0.28% 84.70% 38ms 0.82% TimeStepper::AdvanceOneTimeStep 1ms 0.022% 84.72% 38ms 0.82% VecDuplicate_Seq 1ms 0.022% 84.74% 37ms 0.8% VecCopy 1ms 0.022% 84.76% 36ms 0.78% VecCreate 0 0% 84.76% 36ms 0.78% VecDot 2ms 0.043% 84.81% 35ms 0.76% VecDestroy 2ms 0.043% 84.85% 34ms 0.74% VecAXPY 26ms 0.56% 85.41% 33ms 0.71% AbstractOneStepIvpOdeSolver::Solve 32ms 0.69% 86.10% 33ms 0.71% VecMAXPY_Seq 9ms 0.19% 86.30% 32ms 0.69% AbstractCardiacCell::SetVoltage (partial-inline) 0 0% 86.30% 32ms 0.69% VecDot_Seq 0 0% 86.30% 32ms 0.69% VecXDot_Seq_Private.constprop.0 0 0% 86.30% 31ms 0.67% CxxTest::RealWorldDescription::setUp 0 0% 86.30% 31ms 0.67% PMPI_Init_thread 0 0% 86.30% 31ms 0.67% PetscInitialize 4ms 0.087% 86.39% 31ms 0.67% PetscMallocA 0 0% 86.39% 31ms 0.67% PetscSetup::setUpWorld 0 0% 86.39% 31ms 0.67% PetscSetupUtils::CommonSetup 0 0% 86.39% 31ms 0.67% PetscSetupUtils::InitialisePetsc 31ms 0.67% 87.06% 31ms 0.67% [libchaste_ode.so] 31ms 0.67% 87.73% 31ms 0.67% __memcpy_avx512_unaligned_erms 0 0% 87.73% 31ms 0.67% ompi_mpi_init 7ms 0.15% 87.88% 31ms 0.67% std::__cxx11::basic_string::basic_string 2ms 0.043% 87.92% 30ms 0.65% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 87.92% 30ms 0.65% AbstractBidomainSolver::FinaliseLinearSystem 0 0% 87.92% 29ms 0.63% PMPI_Comm_get_attr 3ms 0.065% 87.99% 29ms 0.63% ompi_attr_get_c 0 0% 87.99% 27ms 0.58% 2ms 0.043% 88.03% 27ms 0.58% PetscMallocAlign 10ms 0.22% 88.25% 25ms 0.54% __GI___libc_malloc 0 0% 88.25% 24ms 0.52% PetscMemcpy (inline) 0 0% 88.25% 24ms 0.52% VecNorm