File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12820ms, 89.65% of 14300ms total Dropped 693 nodes (cum <= 71.50ms) flat flat% sum% cum cum% 0 0% 0% 14293ms 100% __libc_start_call_main 0 0% 0% 14293ms 100% __libc_start_main_impl 0 0% 0% 14293ms 100% _start 0 0% 0% 14290ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14290ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14290ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14290ms 99.93% main 0 0% 0% 14253ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14253ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14253ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14233ms 99.53% AbstractCardiacProblem::Solve 1ms 0.007% 0.007% 11060ms 77.34% AbstractDynamicLinearPdeSolver::Solve 89ms 0.62% 0.63% 8596ms 60.11% AbstractCardiacTissue::SolveCellSystems 63ms 0.44% 1.07% 5288ms 36.98% AbstractCardiacCell::ComputeExceptVoltage 93ms 0.65% 1.72% 4754ms 33.24% AbstractOneStepIvpOdeSolver::InternalSolve 170ms 1.19% 2.91% 4058ms 28.38% EulerIvpOdeSolver::CalculateNextYValue 1047ms 7.32% 10.23% 3852ms 26.94% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 10.23% 3111ms 21.76% MonodomainProblem::WriteOneStep 0 0% 10.23% 3045ms 21.29% Hdf5DataWriter::PutVector 1142ms 7.99% 18.22% 3017ms 21.10% __GI___exp 0 0% 18.22% 3016ms 21.09% H5Dwrite 1ms 0.007% 18.22% 3004ms 21.01% H5D__write 113ms 0.79% 19.01% 2406ms 16.83% AbstractCardiacTissue::UpdateCaches (inline) 631ms 4.41% 23.43% 2231ms 15.60% CellLuoRudy1991FromCellML::GetIIonic 0 0% 23.43% 1893ms 13.24% H5D__chunk_collective_write 11ms 0.077% 23.50% 1893ms 13.24% H5F_set_coll_metadata_reads 7ms 0.049% 23.55% 1677ms 11.73% H5FD_s3comms_uriencode 1584ms 11.08% 34.63% 1633ms 11.42% __ieee754_exp_fma 1ms 0.007% 34.64% 1629ms 11.39% LinearSystem::Solve 1ms 0.007% 34.64% 1542ms 10.78% KSPSolve 3ms 0.021% 34.66% 1542ms 10.78% KSPSolve_Private 2ms 0.014% 34.68% 1537ms 10.75% KSPSolve_CG 19ms 0.13% 34.81% 1395ms 9.76% 0 0% 34.81% 1373ms 9.60% H5F_block_write 1ms 0.007% 34.82% 1373ms 9.60% H5PB_write 1ms 0.007% 34.83% 1372ms 9.59% H5FD_write 0 0% 34.83% 1372ms 9.59% H5F__accum_write 0 0% 34.83% 1318ms 9.22% H5D__mpio_select_write 0 0% 34.83% 1269ms 8.87% PMPI_File_write_at_all 1241ms 8.68% 43.50% 1256ms 8.78% __GI_pwritev64 7ms 0.049% 43.55% 1073ms 7.50% H5D__chunk_cacheable 312ms 2.18% 45.73% 954ms 6.67% H5S_select_iterate 22ms 0.15% 45.89% 905ms 6.33% std::pow (inline) 46ms 0.32% 46.21% 871ms 6.09% __pow 2ms 0.014% 46.22% 859ms 6.01% PCApply 0 0% 46.22% 857ms 5.99% PCApply_BJacobi_Singleblock 1ms 0.007% 46.23% 837ms 5.85% KSPSolve_PREONLY 3ms 0.021% 46.25% 834ms 5.83% MatSolve 0 0% 46.25% 834ms 5.83% PCApply_ICC 825ms 5.77% 52.02% 831ms 5.81% MatSolve_SeqSBAIJ_1_NaturalOrdering 271ms 1.90% 53.92% 818ms 5.72% MonodomainSolver::SetupLinearSystem 46ms 0.32% 54.24% 818ms 5.72% __ieee754_pow_fma 422ms 2.95% 57.19% 670ms 4.69% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.007% 57.20% 655ms 4.58% MatMult 653ms 4.57% 61.76% 654ms 4.57% MatMult_SeqAIJ 62ms 0.43% 62.20% 652ms 4.56% H5D__chunk_set_sizes 627ms 4.38% 66.58% 627ms 4.38% [libchaste_heart.so] 0 0% 66.58% 554ms 3.87% KSP_PCApply.lto_priv.7 348ms 2.43% 69.01% 388ms 2.71% exp_inline (inline) 1ms 0.007% 69.02% 383ms 2.68% KSPConvergedDefault 375ms 2.62% 71.64% 375ms 2.62% log_inline (inline) 50ms 0.35% 71.99% 373ms 2.61% H5S_mpio_space_type 135ms 0.94% 72.94% 314ms 2.20% TimeStepper::TimeStepper 0 0% 72.94% 305ms 2.13% KSP_PCApply 35ms 0.24% 73.18% 286ms 2.00% H5VM_chunk_index 271ms 1.90% 75.08% 271ms 1.90% [libm.so.6] 213ms 1.49% 76.57% 213ms 1.49% H5VM_chunk_index_scaled 78ms 0.55% 77.11% 181ms 1.27% __GI___libc_malloc 170ms 1.19% 78.30% 170ms 1.19% TimeStepper::CalculateNextTime 15ms 0.1% 78.41% 167ms 1.17% ompi_datatype_destroy 165ms 1.15% 79.56% 165ms 1.15% ddot_ 1ms 0.007% 79.57% 164ms 1.15% MPI_Type_free 10ms 0.07% 79.64% 162ms 1.13% __GI___libc_free 40ms 0.28% 79.92% 153ms 1.07% AbstractCardiacCell::SetVoltage (partial-inline) 97ms 0.68% 80.59% 152ms 1.06% _int_free 9ms 0.063% 80.66% 152ms 1.06% ompi_datatype_create 40ms 0.28% 80.94% 142ms 0.99% ompi_datatype_release_args 1ms 0.007% 80.94% 142ms 0.99% ompi_info_register_framework_params 136ms 0.95% 81.90% 136ms 0.95% [libchaste_ode.so] 85ms 0.59% 82.49% 133ms 0.93% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 43ms 0.3% 82.79% 133ms 0.93% std::__cxx11::basic_string::basic_string 92ms 0.64% 83.43% 120ms 0.84% _int_malloc 62ms 0.43% 83.87% 117ms 0.82% H5S_hyper_add_span_element 93ms 0.65% 84.52% 115ms 0.8% AbstractOneStepIvpOdeSolver::Solve 107ms 0.75% 85.27% 108ms 0.76% __ieee754_log_fma 2ms 0.014% 85.28% 102ms 0.71% VecNorm 18ms 0.13% 85.41% 100ms 0.7% H5S_set_version 70ms 0.49% 85.90% 99ms 0.69% __libc_calloc 97ms 0.68% 86.57% 97ms 0.68% __memcpy_avx512_unaligned_erms 0 0% 86.57% 95ms 0.66% std::vector::_M_assign_aux (inline) 0 0% 86.57% 95ms 0.66% std::vector::assign (inline) 34ms 0.24% 86.81% 92ms 0.64% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 86.81% 92ms 0.64% VecNorm_Seq 1ms 0.007% 86.82% 91ms 0.64% VecTDot 1ms 0.007% 86.83% 89ms 0.62% VecTDot_Seq 0 0% 86.83% 88ms 0.62% VecXDot_Seq_Private.constprop.0 88ms 0.62% 87.44% 88ms 0.62% asuint64 (inline) 0 0% 87.44% 85ms 0.59% VecDuplicate 0 0% 87.44% 85ms 0.59% VecDuplicate_MPI 2ms 0.014% 87.45% 84ms 0.59% opal_datatype_create_desc 36ms 0.25% 87.71% 82ms 0.57% H5VM_array_calc 33ms 0.23% 87.94% 81ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 34ms 0.24% 88.17% 80ms 0.56% ompi_datatype_set_args 35ms 0.24% 88.42% 80ms 0.56% std::char_traits::length (inline) 62ms 0.43% 88.85% 76ms 0.53% AbstractParameterisedSystem::SetAnyVariable 5ms 0.035% 88.89% 76ms 0.53% PMPI_Type_create_resized 0 0% 88.89% 76ms 0.53% std::__copy_move::__copy_m (inline) 0 0% 88.89% 76ms 0.53% std::__copy_move_a (inline) 0 0% 88.89% 76ms 0.53% std::__copy_move_a1 (inline) 0 0% 88.89% 76ms 0.53% std::__copy_move_a2 (inline) 0 0% 88.89% 76ms 0.53% std::copy (inline) 50ms 0.35% 89.24% 73ms 0.51% TimeStepper::AdvanceOneTimeStep 59ms 0.41% 89.65% 72ms 0.5% AbstractParameterisedSystem::GetAnyVariable 0 0% 89.65% 72ms 0.5% PMPI_File_set_view