File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12906ms, 87.96% of 14673ms total Dropped 747 nodes (cum <= 73.36ms) flat flat% sum% cum cum% 0 0% 0% 14665ms 99.95% __libc_start_call_main 0 0% 0% 14665ms 99.95% __libc_start_main_impl 0 0% 0% 14665ms 99.95% _start 0 0% 0% 14663ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14663ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14663ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14663ms 99.93% main 0 0% 0% 14635ms 99.74% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14635ms 99.74% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14635ms 99.74% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.014% 0.014% 14613ms 99.59% AbstractCardiacProblem::Solve 3ms 0.02% 0.034% 10964ms 74.72% AbstractDynamicLinearPdeSolver::Solve 58ms 0.4% 0.43% 8672ms 59.10% AbstractCardiacTissue::SolveCellSystems 79ms 0.54% 0.97% 5276ms 35.96% AbstractCardiacCell::ComputeExceptVoltage 117ms 0.8% 1.77% 4690ms 31.96% AbstractOneStepIvpOdeSolver::InternalSolve 124ms 0.85% 2.61% 3982ms 27.14% EulerIvpOdeSolver::CalculateNextYValue 946ms 6.45% 9.06% 3824ms 26.06% CellLuoRudy1991FromCellML::EvaluateYDerivatives 2ms 0.014% 9.07% 3584ms 24.43% MonodomainProblem::WriteOneStep 3ms 0.02% 9.09% 3443ms 23.46% H5Dwrite 4ms 0.027% 9.12% 3420ms 23.31% H5D__write 4ms 0.027% 9.15% 3415ms 23.27% Hdf5DataWriter::PutVector 1226ms 8.36% 17.50% 3063ms 20.88% __GI___exp 88ms 0.6% 18.10% 2590ms 17.65% AbstractCardiacTissue::UpdateCaches (inline) 839ms 5.72% 23.82% 2444ms 16.66% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0068% 23.83% 2139ms 14.58% H5D__chunk_collective_write 10ms 0.068% 23.89% 2138ms 14.57% H5F_set_coll_metadata_reads 16ms 0.11% 24.00% 1899ms 12.94% H5FD_s3comms_uriencode 3ms 0.02% 24.02% 1610ms 10.97% LinearSystem::Solve 1ms 0.0068% 24.03% 1539ms 10.49% H5F_block_write 1ms 0.0068% 24.04% 1538ms 10.48% H5PB_write 2ms 0.014% 24.05% 1537ms 10.48% H5F__accum_write 4ms 0.027% 24.08% 1535ms 10.46% H5FD_write 40ms 0.27% 24.35% 1528ms 10.41% 0 0% 24.35% 1493ms 10.18% KSPSolve 7ms 0.048% 24.40% 1493ms 10.18% KSPSolve_Private 3ms 0.02% 24.42% 1475ms 10.05% KSPSolve_CG 0 0% 24.42% 1447ms 9.86% H5D__mpio_select_write 1365ms 9.30% 33.72% 1367ms 9.32% __ieee754_exp_fma 0 0% 33.72% 1331ms 9.07% PMPI_File_write_at_all 1297ms 8.84% 42.56% 1303ms 8.88% __GI_pwritev64 8ms 0.055% 42.62% 1163ms 7.93% H5D__chunk_cacheable 384ms 2.62% 45.23% 1005ms 6.85% H5S_select_iterate 16ms 0.11% 45.34% 857ms 5.84% std::pow (inline) 76ms 0.52% 45.86% 828ms 5.64% __pow 0 0% 45.86% 765ms 5.21% PCApply 0 0% 45.86% 760ms 5.18% PCApply_BJacobi_Singleblock 60ms 0.41% 46.27% 744ms 5.07% __ieee754_pow_fma 4ms 0.027% 46.30% 718ms 4.89% KSPSolve_PREONLY 1ms 0.0068% 46.30% 710ms 4.84% MatSolve 0 0% 46.30% 710ms 4.84% PCApply_ICC 707ms 4.82% 51.12% 709ms 4.83% MatSolve_SeqSBAIJ_1_NaturalOrdering 243ms 1.66% 52.78% 657ms 4.48% MonodomainSolver::SetupLinearSystem 632ms 4.31% 57.08% 632ms 4.31% [libchaste_heart.so] 76ms 0.52% 57.60% 631ms 4.30% H5D__chunk_set_sizes 384ms 2.62% 60.22% 571ms 3.89% CellLuoRudy1991FromCellML::VerifyStateVariables 2ms 0.014% 60.23% 565ms 3.85% MatMult 558ms 3.80% 64.04% 563ms 3.84% MatMult_SeqAIJ 1ms 0.0068% 64.04% 519ms 3.54% KSP_PCApply.lto_priv.7 495ms 3.37% 67.42% 495ms 3.37% [libm.so.6] 52ms 0.35% 67.77% 451ms 3.07% H5S_mpio_space_type 409ms 2.79% 70.56% 409ms 2.79% log_inline (inline) 2ms 0.014% 70.57% 361ms 2.46% KSPConvergedDefault 118ms 0.8% 71.38% 322ms 2.19% TimeStepper::TimeStepper 264ms 1.80% 73.18% 270ms 1.84% exp_inline (inline) 32ms 0.22% 73.39% 258ms 1.76% H5VM_chunk_index 3ms 0.02% 73.41% 253ms 1.72% KSP_PCApply 95ms 0.65% 74.06% 215ms 1.47% __GI___libc_malloc 209ms 1.42% 75.49% 209ms 1.42% TimeStepper::CalculateNextTime 207ms 1.41% 76.90% 207ms 1.41% ddot_ 195ms 1.33% 78.23% 195ms 1.33% H5VM_chunk_index_scaled 12ms 0.082% 78.31% 184ms 1.25% ompi_datatype_destroy 4ms 0.027% 78.33% 177ms 1.21% MPI_Type_free 49ms 0.33% 78.67% 173ms 1.18% AbstractCardiacCell::SetVoltage (partial-inline) 23ms 0.16% 78.83% 173ms 1.18% __GI___libc_free 120ms 0.82% 79.64% 167ms 1.14% AbstractOneStepIvpOdeSolver::Solve 2ms 0.014% 79.66% 167ms 1.14% Hdf5DataWriter::PutUnlimitedVariable 163ms 1.11% 80.77% 163ms 1.11% __ieee754_log_fma 9ms 0.061% 80.83% 159ms 1.08% ompi_datatype_create 48ms 0.33% 81.16% 158ms 1.08% ompi_datatype_release_args 5ms 0.034% 81.19% 158ms 1.08% ompi_info_register_framework_params 89ms 0.61% 81.80% 148ms 1.01% _int_free 143ms 0.97% 82.77% 143ms 0.97% [libchaste_ode.so] 2ms 0.014% 82.78% 131ms 0.89% PMPI_File_set_view 3ms 0.02% 82.81% 127ms 0.87% VecNorm 95ms 0.65% 83.45% 125ms 0.85% _int_malloc 3ms 0.02% 83.47% 124ms 0.85% VecTDot 29ms 0.2% 83.67% 122ms 0.83% H5S_set_version 1ms 0.0068% 83.68% 118ms 0.8% VecNorm_Seq 0 0% 83.68% 117ms 0.8% VecTDot_Seq 1ms 0.0068% 83.68% 117ms 0.8% VecXDot_Seq_Private.constprop.0 74ms 0.5% 84.19% 113ms 0.77% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 0 0% 84.19% 111ms 0.76% VecDuplicate 3ms 0.02% 84.21% 111ms 0.76% VecDuplicate_MPI 62ms 0.42% 84.63% 104ms 0.71% TimeStepper::AdvanceOneTimeStep 45ms 0.31% 84.94% 102ms 0.7% H5S_hyper_add_span_element 4ms 0.027% 84.97% 95ms 0.65% PMPI_Type_create_resized 31ms 0.21% 85.18% 93ms 0.63% H5VM_array_calc 26ms 0.18% 85.35% 88ms 0.6% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 86ms 0.59% 85.94% 87ms 0.59% AbstractParameterisedSystem::SetAnyVariable 60ms 0.41% 86.35% 86ms 0.59% __libc_calloc 31ms 0.21% 86.56% 86ms 0.59% ompi_datatype_set_args 2ms 0.014% 86.57% 84ms 0.57% ompi_datatype_duplicate 4ms 0.027% 86.60% 83ms 0.57% opal_datatype_create_desc 63ms 0.43% 87.03% 81ms 0.55% AbstractParameterisedSystem::GetAnyVariable 77ms 0.52% 87.56% 77ms 0.52% std::isinf (inline) 21ms 0.14% 87.70% 75ms 0.51% AbstractCardiacCell::GetVoltage (partial-inline) 5ms 0.034% 87.73% 75ms 0.51% H5D__chunk_allocated 33ms 0.22% 87.96% 74ms 0.5% std::__cxx11::basic_string::basic_string