File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12797ms, 85.47% of 14972ms total Dropped 766 nodes (cum <= 74.86ms) flat flat% sum% cum cum% 0 0% 0% 14963ms 99.94% __libc_start_call_main 0 0% 0% 14963ms 99.94% __libc_start_main_impl 0 0% 0% 14963ms 99.94% _start 0 0% 0% 14960ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14960ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14960ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14960ms 99.92% main 0 0% 0% 14916ms 99.63% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14916ms 99.63% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14916ms 99.63% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14892ms 99.47% AbstractCardiacProblem::Solve 3ms 0.02% 0.033% 11445ms 76.44% AbstractDynamicLinearPdeSolver::Solve 71ms 0.47% 0.51% 9088ms 60.70% AbstractCardiacTissue::SolveCellSystems 103ms 0.69% 1.20% 5521ms 36.88% AbstractCardiacCell::ComputeExceptVoltage 111ms 0.74% 1.94% 4859ms 32.45% AbstractOneStepIvpOdeSolver::InternalSolve 157ms 1.05% 2.99% 4200ms 28.05% EulerIvpOdeSolver::CalculateNextYValue 960ms 6.41% 9.40% 3999ms 26.71% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1841ms 12.30% 21.69% 3598ms 24.03% __GI___exp 1ms 0.0067% 21.70% 3387ms 22.62% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.71% 3248ms 21.69% H5Dwrite 0 0% 21.71% 3232ms 21.59% Hdf5DataWriter::PutVector 1ms 0.0067% 21.71% 3220ms 21.51% H5D__write 127ms 0.85% 22.56% 2823ms 18.86% AbstractCardiacTissue::UpdateCaches (inline) 750ms 5.01% 27.57% 2577ms 17.21% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 27.58% 1882ms 12.57% H5D__chunk_collective_write 24ms 0.16% 27.74% 1881ms 12.56% H5F_set_coll_metadata_reads 17ms 0.11% 27.85% 1686ms 11.26% H5FD_s3comms_uriencode 1365ms 9.12% 36.97% 1686ms 11.26% __ieee754_exp_fma 4ms 0.027% 37.00% 1577ms 10.53% LinearSystem::Solve 0 0% 37.00% 1449ms 9.68% KSPSolve 3ms 0.02% 37.02% 1449ms 9.68% KSPSolve_Private 1ms 0.0067% 37.02% 1436ms 9.59% KSPSolve_CG 40ms 0.27% 37.29% 1325ms 8.85% 2ms 0.013% 37.30% 1317ms 8.80% H5F__accum_write 0 0% 37.30% 1317ms 8.80% H5F_block_write 0 0% 37.30% 1317ms 8.80% H5PB_write 3ms 0.02% 37.32% 1315ms 8.78% H5FD_write 6ms 0.04% 37.36% 1219ms 8.14% H5D__chunk_cacheable 0 0% 37.36% 1212ms 8.10% H5D__mpio_select_write 0 0% 37.36% 1108ms 7.40% PMPI_File_write_at_all 1086ms 7.25% 44.62% 1091ms 7.29% __GI_pwritev64 346ms 2.31% 46.93% 1063ms 7.10% H5S_select_iterate 3ms 0.02% 46.95% 973ms 6.50% std::pow (inline) 85ms 0.57% 47.52% 970ms 6.48% __pow 96ms 0.64% 48.16% 885ms 5.91% __ieee754_pow_fma 3ms 0.02% 48.18% 775ms 5.18% PCApply 0 0% 48.18% 768ms 5.13% PCApply_BJacobi_Singleblock 289ms 1.93% 50.11% 760ms 5.08% MonodomainSolver::SetupLinearSystem 0 0% 50.11% 748ms 5.00% KSPSolve_PREONLY 1ms 0.0067% 50.11% 745ms 4.98% MatSolve 0 0% 50.11% 745ms 4.98% PCApply_ICC 736ms 4.92% 55.03% 744ms 4.97% MatSolve_SeqSBAIJ_1_NaturalOrdering 86ms 0.57% 55.60% 727ms 4.86% H5D__chunk_set_sizes 4ms 0.027% 55.63% 624ms 4.17% MatMult 617ms 4.12% 59.75% 620ms 4.14% MatMult_SeqAIJ 3ms 0.02% 59.77% 549ms 3.67% KSP_PCApply.lto_priv.7 74ms 0.49% 60.27% 492ms 3.29% H5S_mpio_space_type 220ms 1.47% 61.74% 459ms 3.07% CellLuoRudy1991FromCellML::VerifyStateVariables 441ms 2.95% 64.68% 441ms 2.95% log_inline (inline) 297ms 1.98% 66.66% 305ms 2.04% exp_inline (inline) 4ms 0.027% 66.69% 304ms 2.03% KSPConvergedDefault 226ms 1.51% 68.20% 281ms 1.88% top12 (inline) 253ms 1.69% 69.89% 253ms 1.69% [libchaste_heart.so] 107ms 0.71% 70.61% 242ms 1.62% TimeStepper::TimeStepper 15ms 0.1% 70.71% 232ms 1.55% H5VM_chunk_index 0 0% 70.71% 230ms 1.54% KSP_PCApply 41ms 0.27% 70.98% 215ms 1.44% __GI___libc_malloc 152ms 1.02% 71.99% 195ms 1.30% _int_malloc 45ms 0.3% 72.29% 178ms 1.19% AbstractCardiacCell::SetVoltage (partial-inline) 23ms 0.15% 72.45% 175ms 1.17% __GI___libc_free 175ms 1.17% 73.62% 175ms 1.17% ddot_ 11ms 0.073% 73.69% 175ms 1.17% ompi_datatype_create 9ms 0.06% 73.75% 174ms 1.16% ompi_datatype_destroy 7ms 0.047% 73.80% 173ms 1.16% MPI_Type_free 130ms 0.87% 74.67% 154ms 1.03% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 3ms 0.02% 74.69% 154ms 1.03% Hdf5DataWriter::PutUnlimitedVariable 60ms 0.4% 75.09% 152ms 1.02% _int_free 34ms 0.23% 75.31% 149ms 1% ompi_datatype_release_args 5ms 0.033% 75.35% 149ms 1% ompi_info_register_framework_params 112ms 0.75% 76.10% 146ms 0.98% AbstractOneStepIvpOdeSolver::Solve 146ms 0.98% 77.07% 146ms 0.98% asuint64 (inline) 144ms 0.96% 78.03% 144ms 0.96% TimeStepper::CalculateNextTime 36ms 0.24% 78.27% 143ms 0.96% H5S_set_version 59ms 0.39% 78.67% 135ms 0.9% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 58ms 0.39% 79.05% 135ms 0.9% H5S_hyper_add_span_element 126ms 0.84% 79.90% 126ms 0.84% __memcpy_avx_unaligned_erms 1ms 0.0067% 79.90% 125ms 0.83% PMPI_File_set_view 120ms 0.8% 80.70% 120ms 0.8% H5VM_chunk_index_scaled 2ms 0.013% 80.72% 115ms 0.77% VecNorm 0 0% 80.72% 112ms 0.75% VecTDot 112ms 0.75% 81.47% 112ms 0.75% __ieee754_log_fma 0 0% 81.47% 110ms 0.73% VecTDot_Seq 0 0% 81.47% 110ms 0.73% VecXDot_Seq_Private.constprop.0 108ms 0.72% 82.19% 108ms 0.72% ReplicatableVector::operator[] 38ms 0.25% 82.44% 107ms 0.71% H5VM_array_calc 2ms 0.013% 82.45% 107ms 0.71% VecNorm_Seq 89ms 0.59% 83.05% 104ms 0.69% AbstractParameterisedSystem::GetAnyVariable 80ms 0.53% 83.58% 103ms 0.69% AbstractParameterisedSystem::SetAnyVariable 101ms 0.67% 84.26% 101ms 0.67% std::isinf (inline) 2ms 0.013% 84.27% 98ms 0.65% PMPI_Type_create_resized 97ms 0.65% 84.92% 97ms 0.65% H5VM_array_offset_pre 4ms 0.027% 84.95% 97ms 0.65% ompi_datatype_duplicate 0 0% 84.95% 85ms 0.57% VecDuplicate 1ms 0.0067% 84.95% 85ms 0.57% VecDuplicate_MPI 1ms 0.0067% 84.96% 84ms 0.56% H5D__chunk_allocated 49ms 0.33% 85.29% 84ms 0.56% TimeStepper::AdvanceOneTimeStep 0 0% 85.29% 80ms 0.53% std::vector::_M_assign_aux (inline) 0 0% 85.29% 80ms 0.53% std::vector::assign (inline) 0 0% 85.29% 78ms 0.52% H5D__select_write 0 0% 85.29% 78ms 0.52% H5Dgather 1ms 0.0067% 85.29% 77ms 0.51% H5D__contig_fill 0 0% 85.29% 77ms 0.51% opal_datatype_create_desc 0 0% 85.29% 76ms 0.51% H5D__contig_write 0 0% 85.29% 76ms 0.51% H5VM_opvv 27ms 0.18% 85.47% 76ms 0.51% __libc_calloc