File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 108562ms, 91.79% of 118269ms total Dropped 1135 nodes (cum <= 591.35ms) flat flat% sum% cum cum% 0 0% 0% 118258ms 100% __libc_start_call_main 0 0% 0% 118258ms 100% __libc_start_main_impl 0 0% 0% 118258ms 100% _start 0 0% 0% 118255ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 118255ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 118255ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 118255ms 100% main 0 0% 0% 118220ms 100% CxxTest::RealTestDescription::run 0 0% 0% 118220ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 118220ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 118220ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 118220ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 118219ms 100% AbstractConvergenceTester::Converge 4ms 0.0034% 0.0034% 116973ms 98.90% AbstractCardiacProblem::Solve 11ms 0.0093% 0.013% 116224ms 98.27% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0034% 0.016% 65030ms 54.98% LinearSystem::Solve 2ms 0.0017% 0.018% 64590ms 54.61% KSPSolve 14ms 0.012% 0.03% 64589ms 54.61% KSPSolve_Private 11ms 0.0093% 0.039% 64198ms 54.28% KSPSolve_SYMMLQ 208ms 0.18% 0.21% 42454ms 35.90% AbstractCardiacTissue::SolveCellSystems 8ms 0.0068% 0.22% 37025ms 31.31% PCApply 3ms 0.0025% 0.22% 37009ms 31.29% PCApply_BJacobi_Singleblock 3ms 0.0025% 0.23% 34449ms 29.13% KSPSolve_PREONLY (partial-inline) 1ms 0.00085% 0.23% 33269ms 28.13% PCApply_ICC 4ms 0.0034% 0.23% 33268ms 28.13% MatSolve 32737ms 27.68% 27.91% 33264ms 28.13% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1324ms 1.12% 29.03% 32437ms 27.43% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0017% 29.03% 31857ms 26.94% KSP_PCApply.lto_priv.18 6839ms 5.78% 34.81% 27984ms 23.66% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 9ms 0.0076% 34.82% 21700ms 18.35% MatMult 271ms 0.23% 35.05% 21691ms 18.34% MatMult_SeqAIJ (partial-inline) 21185ms 17.91% 52.96% 21690ms 18.34% MatMult_SeqAIJ_Inode (inline) 1975ms 1.67% 54.63% 14542ms 12.30% CardiacNewtonSolver::Solve 276ms 0.23% 54.87% 9178ms 7.76% AbstractCardiacTissue::UpdateCaches (inline) 1953ms 1.65% 56.52% 8714ms 7.37% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4232ms 3.58% 60.10% 8362ms 7.07% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1158ms 0.98% 61.08% 7713ms 6.52% BidomainSolver::SetupLinearSystem 1138ms 0.96% 62.04% 7219ms 6.10% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00085% 62.04% 7155ms 6.05% KSP_PCApply (partial-inline) 9ms 0.0076% 62.05% 6490ms 5.49% KSPConvergedDefault 5821ms 4.92% 66.97% 5821ms 4.92% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3823ms 3.23% 70.20% 3865ms 3.27% __ieee754_log_fma 0 0% 70.20% 3775ms 3.19% boost::numeric::ublas::norm_inf (inline) 2504ms 2.12% 72.32% 3775ms 3.19% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.32% 3775ms 3.19% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.32% 3775ms 3.19% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 4ms 0.0034% 72.32% 3351ms 2.83% MatNullSpaceRemove 24ms 0.02% 72.34% 3290ms 2.78% std::pow (inline) 407ms 0.34% 72.69% 3261ms 2.76% __pow 3215ms 2.72% 75.40% 3215ms 2.72% __memcpy_avx_unaligned_erms 0 0% 75.40% 3175ms 2.68% PetscMemcpy (inline) 1705ms 1.44% 76.85% 2935ms 2.48% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 404ms 0.34% 77.19% 2845ms 2.41% __ieee754_pow_fma 22ms 0.019% 77.21% 2670ms 2.26% VecCopy 2ms 0.0017% 77.21% 2645ms 2.24% VecCopy_Seq (partial-inline) 2557ms 2.16% 79.37% 2557ms 2.16% ddot_ 10ms 0.0085% 79.38% 2329ms 1.97% VecAXPY 6ms 0.0051% 79.38% 2319ms 1.96% VecAXPY_Seq 2294ms 1.94% 81.32% 2294ms 1.94% daxpy_ 3ms 0.0025% 81.33% 2053ms 1.74% AbstractFeVolumeIntegralAssembler::DoAssemble 5ms 0.0042% 81.33% 2037ms 1.72% VecDot 0 0% 81.33% 2032ms 1.72% VecDot_Seq 2ms 0.0017% 81.33% 2032ms 1.72% VecXDot_Seq_Private.constprop.0 1ms 0.00085% 81.33% 1925ms 1.63% VecMDot 14ms 0.012% 81.34% 1924ms 1.63% VecMXDot_Private 1899ms 1.61% 82.95% 1906ms 1.61% VecMDot_Seq 20ms 0.017% 82.97% 1685ms 1.42% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1579ms 1.34% 84.30% 1637ms 1.38% exp_inline (inline) 1481ms 1.25% 85.55% 1481ms 1.25% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 7ms 0.0059% 85.56% 1422ms 1.20% VecMAXPY 1405ms 1.19% 86.75% 1415ms 1.20% VecMAXPY_Seq 0 0% 86.75% 1406ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.75% 1168ms 0.99% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.75% 1168ms 0.99% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.75% 1168ms 0.99% boost_numeric_ublas_abs (inline) 1168ms 0.99% 87.74% 1168ms 0.99% std::abs (inline) 1139ms 0.96% 88.70% 1139ms 0.96% __memset_avx2_unaligned_erms 0 0% 88.70% 1128ms 0.95% PetscMemzero (inline) 0 0% 88.70% 1096ms 0.93% CuboidMeshConstructor::Construct 0 0% 88.70% 1095ms 0.93% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00085% 88.70% 1095ms 0.93% DistributedTetrahedralMesh::ConstructCuboid 4ms 0.0034% 88.70% 1081ms 0.91% boost::numeric::ublas::matrix_assign (inline) 224ms 0.19% 88.89% 1072ms 0.91% boost::numeric::ublas::indexing_matrix_assign 790ms 0.67% 89.56% 1066ms 0.9% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 3ms 0.0025% 89.56% 991ms 0.84% Element::Element 4ms 0.0034% 89.57% 951ms 0.8% VecDuplicate 2ms 0.0017% 89.57% 945ms 0.8% AbstractTetrahedralElement::CalculateJacobian 4ms 0.0034% 89.57% 915ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 867ms 0.73% 90.30% 867ms 0.73% [libchaste_heart.so] 5ms 0.0042% 90.31% 840ms 0.71% BidomainAssembler::ComputeMatrixTerm 8ms 0.0068% 90.32% 832ms 0.7% boost::numeric::ublas::c_matrix::c_matrix (inline) 13ms 0.011% 90.33% 793ms 0.67% PetscMallocA 7ms 0.0059% 90.33% 780ms 0.66% PetscMallocAlign (partial-inline) 763ms 0.65% 90.98% 763ms 0.65% log_inline (inline) 7ms 0.0059% 90.98% 739ms 0.62% VecScale 6ms 0.0051% 90.99% 732ms 0.62% VecScale_Seq 726ms 0.61% 91.60% 726ms 0.61% dscal_ 3ms 0.0025% 91.60% 724ms 0.61% VecNorm 2ms 0.0017% 91.61% 716ms 0.61% VecNorm_Seq 0 0% 91.61% 713ms 0.6% AbstractBidomainSolver::FinaliseLinearSystem 220ms 0.19% 91.79% 712ms 0.6% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.79% 688ms 0.58% BidomainProblem::WriteOneStep 0 0% 91.79% 647ms 0.55% AbstractFeAssemblerInterface::Assemble (inline)